RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 TMEM35BQ8NCS4 154 aa15.58■□□□□ 0.08
CSMD1-207ENST00000520451 SAP25Q8TEE9 199 aa15.58■□□□□ 0.08
CSMD1-207ENST00000520451 FAM131CQ96AQ9 280 aa15.58■□□□□ 0.08
CSMD1-207ENST00000520451 NPY6RQ99463 290 aa15.58■□□□□ 0.08
CSMD1-207ENST00000520451 TKTL2Q9H0I9 626 aa15.58■□□□□ 0.08
CSMD1-207ENST00000520451 KDM4CQ9H3R0 1056 aa15.58■□□□□ 0.08
CSMD1-207ENST00000520451 NDST4Q9H3R1 872 aa15.58■□□□□ 0.08
CSMD1-207ENST00000520451 WDCPQ9H6R7 721 aa15.58■□□□□ 0.08
CSMD1-207ENST00000520451 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.58■□□□□ 0.08
CSMD1-207ENST00000520451 PPM1HQ9ULR3 514 aa15.58■□□□□ 0.08
CSMD1-207ENST00000520451 STAP1Q9ULZ2 295 aa15.58■□□□□ 0.08
CSMD1-207ENST00000520451 TBC1D30Q9Y2I9 924 aa15.58■□□□□ 0.08
CSMD1-207ENST00000520451 CELSR3Q9NYQ7 3312 aa15.58■□□□□ 0.08
CSMD1-207ENST00000520451 FAM170AA1A519 330 aa15.57■□□□□ 0.08
CSMD1-207ENST00000520451 PES1O00541 588 aaKnown RBP15.57■□□□□ 0.08
CSMD1-207ENST00000520451 ENC1O14682 589 aa15.57■□□□□ 0.08
CSMD1-207ENST00000520451 MCF2LO15068 1137 aa15.57■□□□□ 0.08
CSMD1-207ENST00000520451 RHOCP08134 193 aa15.57■□□□□ 0.08
CSMD1-207ENST00000520451 EPHA8P29322 1005 aaPredicted RBP15.57■□□□□ 0.08
CSMD1-207ENST00000520451 CXCR3P49682 368 aa15.57■□□□□ 0.08
CSMD1-207ENST00000520451 KRT83P78385 493 aa15.57■□□□□ 0.08
CSMD1-207ENST00000520451 DEUP1Q05D60 604 aa15.57■□□□□ 0.08
CSMD1-207ENST00000520451 DRAP1Q14919 205 aaPredicted RBP15.57■□□□□ 0.08
CSMD1-207ENST00000520451 SMAD1Q15797 465 aaKnown RBP15.57■□□□□ 0.08
CSMD1-207ENST00000520451 C5orf22Q49AR2 442 aa15.57■□□□□ 0.08
CSMD1-207ENST00000520451 ALFQ53S48 1182 aa15.57■□□□□ 0.08
CSMD1-207ENST00000520451 MIIPQ5JXC2 388 aa15.57■□□□□ 0.08
CSMD1-207ENST00000520451 BRMS1LQ5PSV4 323 aa15.57■□□□□ 0.08
CSMD1-207ENST00000520451 FAM102AQ5T9C2 384 aaPredicted RBP15.57■□□□□ 0.08
CSMD1-207ENST00000520451 AGBL4Q5VU57 503 aa15.57■□□□□ 0.08
CSMD1-207ENST00000520451 C19orf48Q6RUI8 117 aa15.57■□□□□ 0.08
CSMD1-207ENST00000520451 PIP4K2CQ8TBX8 421 aa15.57■□□□□ 0.08
CSMD1-207ENST00000520451 CNDP2Q96KP4 475 aaKnown RBP15.57■□□□□ 0.08
CSMD1-207ENST00000520451 TUBGCP2Q9BSJ2 902 aa15.57■□□□□ 0.08
CSMD1-207ENST00000520451 CLSTN2Q9H4D0 955 aa15.57■□□□□ 0.08
CSMD1-207ENST00000520451 ANLNQ9NQW6 1124 aa15.57■□□□□ 0.08
CSMD1-207ENST00000520451 ARHGEF38Q9NXL2 777 aa15.57■□□□□ 0.08
CSMD1-207ENST00000520451 GPSM3Q9Y4H4 160 aa15.57■□□□□ 0.08
CSMD1-207ENST00000520451 SNX10Q9Y5X0 201 aa15.57■□□□□ 0.08
CSMD1-207ENST00000520451 FHOD1Q9Y613 1164 aa15.57■□□□□ 0.08
CSMD1-207ENST00000520451 APC2O95996 2303 aa15.57■□□□□ 0.08
CSMD1-207ENST00000520451 TP53BP1Q12888 1972 aaPredicted RBP15.56■□□□□ 0.08
CSMD1-207ENST00000520451 I6L893 689 aaPredicted RBP15.56■□□□□ 0.08
CSMD1-207ENST00000520451 CBX4O00257 560 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 SNAP91O60641 907 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 LDOC1O95751 146 aaPredicted RBP15.56■□□□□ 0.08
CSMD1-207ENST00000520451 SRCP12931 536 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 CYP11B1P15538 503 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 NUDT1P36639 197 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 DPCR1Q3MIW9 517 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 TAF3Q5VWG9 929 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 DPY19L2P1Q6NXN4 242 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 LRRC31Q6UY01 552 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 TRIM69Q86WT6 500 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 OXR1Q8N573 874 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 EID2Q8N6I1 236 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 MFSD2AQ8NA29 543 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 ATP11CQ8NB49 1132 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 C18orf8Q96DM3 657 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 TBCBQ99426 244 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 PSMB7Q99436 277 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 C2orf49Q9BVC5 232 aaPredicted RBP15.56■□□□□ 0.08
CSMD1-207ENST00000520451 ARHGAP20Q9P2F6 1191 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 VPS51Q9UID3 782 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 DMTF1Q9Y222 760 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 HS3ST2Q9Y278 367 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 RAXQ9Y2V3 346 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 FARP1Q9Y4F1 1045 aaPredicted RBP15.56■□□□□ 0.08
CSMD1-207ENST00000520451 PAXBP1Q9Y5B6 917 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 ACACAQ13085 2346 aa15.56■□□□□ 0.08
CSMD1-207ENST00000520451 GOLGA4Q13439 2230 aaKnown RBP15.55■□□□□ 0.08
CSMD1-207ENST00000520451 TRABD2BA6NFA1 517 aa15.55■□□□□ 0.08
CSMD1-207ENST00000520451 MT-CO1P00395 513 aa15.55■□□□□ 0.08
CSMD1-207ENST00000520451 F9P00740 461 aa15.55■□□□□ 0.08
CSMD1-207ENST00000520451 HOXB3P14651 431 aaPredicted RBP15.55■□□□□ 0.08
CSMD1-207ENST00000520451 CDH5P33151 784 aaPredicted RBP15.55■□□□□ 0.08
CSMD1-207ENST00000520451 SCNN1AP37088 669 aa15.55■□□□□ 0.08
CSMD1-207ENST00000520451 GABRB2P47870 512 aa15.55■□□□□ 0.08
CSMD1-207ENST00000520451 CYP4F3Q08477 520 aa15.55■□□□□ 0.08
CSMD1-207ENST00000520451 DNAJC3Q13217 504 aa15.55■□□□□ 0.08
CSMD1-207ENST00000520451 SLC25A52Q3SY17 297 aa15.55■□□□□ 0.08
CSMD1-207ENST00000520451 SETMARQ53H47 684 aaPredicted RBP15.55■□□□□ 0.08
CSMD1-207ENST00000520451 KLHDC7AQ5VTJ3 777 aa15.55■□□□□ 0.08
CSMD1-207ENST00000520451 TFAP2DQ7Z6R9 452 aa15.55■□□□□ 0.08
CSMD1-207ENST00000520451 ERICH1Q86X53 443 aa15.55■□□□□ 0.08
CSMD1-207ENST00000520451 SPATS2Q86XZ4 545 aaKnown RBP15.55■□□□□ 0.08
CSMD1-207ENST00000520451 XYLT1Q86Y38 959 aa15.55■□□□□ 0.08
CSMD1-207ENST00000520451 ZNF683Q8IZ20 524 aa15.55■□□□□ 0.08
CSMD1-207ENST00000520451 NT5C3BQ969T7 300 aa15.55■□□□□ 0.08
CSMD1-207ENST00000520451 PGAP3Q96FM1 320 aaPredicted RBP15.55■□□□□ 0.08
CSMD1-207ENST00000520451 CCDC114Q96M63 670 aa15.55■□□□□ 0.08
CSMD1-207ENST00000520451 ERVMER34-1Q9H9K5 563 aa15.55■□□□□ 0.08
CSMD1-207ENST00000520451 PREBQ9HCU5 417 aa15.55■□□□□ 0.08
CSMD1-207ENST00000520451 TMPRSS4Q9NRS4 437 aa15.55■□□□□ 0.08
CSMD1-207ENST00000520451 MPP6Q9NZW5 540 aa15.55■□□□□ 0.08
CSMD1-207ENST00000520451 DKK4Q9UBT3 224 aa15.55■□□□□ 0.08
CSMD1-207ENST00000520451 PCDHGA1Q9Y5H4 931 aa15.55■□□□□ 0.08
CSMD1-207ENST00000520451 COL5A1P20908 1838 aaPredicted RBP15.54■□□□□ 0.08
CSMD1-207ENST00000520451 ATRXP46100 2492 aa15.54■□□□□ 0.08
CSMD1-207ENST00000520451 GOLGA8SH3BPF8 625 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms