RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 PMPCAQ10713 525 aa6.66□□□□□ -1.34
PTPN12-213ENST00000519553 C5orf22Q49AR2 442 aa6.66□□□□□ -1.34
PTPN12-213ENST00000519553 SH2D4BQ5SQS7 431 aa6.66□□□□□ -1.34
PTPN12-213ENST00000519553 TTC39AQ5SRH9 613 aa6.66□□□□□ -1.34
PTPN12-213ENST00000519553 KDELC2Q7Z4H8 507 aa6.66□□□□□ -1.34
PTPN12-213ENST00000519553 USP13Q92995 863 aaPredicted RBP6.66□□□□□ -1.34
PTPN12-213ENST00000519553 FRG2BQ96QU4 278 aa6.66□□□□□ -1.34
PTPN12-213ENST00000519553 TMEM79Q9BSE2 394 aa6.66□□□□□ -1.34
PTPN12-213ENST00000519553 TRMOQ9BU70 441 aa6.66□□□□□ -1.34
PTPN12-213ENST00000519553 CADM1Q9BY67 442 aaKnown RBP6.66□□□□□ -1.34
PTPN12-213ENST00000519553 SLC29A3Q9BZD2 475 aa6.66□□□□□ -1.34
PTPN12-213ENST00000519553 PCDHA12Q9UN75 941 aa6.66□□□□□ -1.34
PTPN12-213ENST00000519553 TRBV5-7A0A0A0MS05 114 aa6.65□□□□□ -1.34
PTPN12-213ENST00000519553 RRN3P2A6NIE6 340 aa6.65□□□□□ -1.34
PTPN12-213ENST00000519553 TSPAN3O60637 253 aa6.65□□□□□ -1.34
PTPN12-213ENST00000519553 HLA-DQA2P01906 255 aa6.65□□□□□ -1.34
PTPN12-213ENST00000519553 LCKP06239 509 aa6.65□□□□□ -1.34
PTPN12-213ENST00000519553 POLBP06746 335 aa6.65□□□□□ -1.34
PTPN12-213ENST00000519553 PKP1Q13835 747 aa6.65□□□□□ -1.34
PTPN12-213ENST00000519553 AP5B1Q2VPB7 878 aa6.65□□□□□ -1.34
PTPN12-213ENST00000519553 ENTPD8Q5MY95 495 aa6.65□□□□□ -1.34
PTPN12-213ENST00000519553 C6orf10Q5SRN2 563 aa6.65□□□□□ -1.34
PTPN12-213ENST00000519553 PXDC1Q5TGL8 231 aa6.65□□□□□ -1.34
PTPN12-213ENST00000519553 AADACL2Q6P093 401 aa6.65□□□□□ -1.34
PTPN12-213ENST00000519553 CCDC25Q86WR0 208 aa6.65□□□□□ -1.34
PTPN12-213ENST00000519553 ARFGAP1Q8N6T3 406 aa6.65□□□□□ -1.34
PTPN12-213ENST00000519553 SCAIQ8N9R8 606 aa6.65□□□□□ -1.34
PTPN12-213ENST00000519553 ELOVL5Q9NYP7 299 aa6.65□□□□□ -1.34
PTPN12-213ENST00000519553 OSGIN2Q9Y236 505 aa6.65□□□□□ -1.34
PTPN12-213ENST00000519553 A0A0A0MQY5 61 aa6.64□□□□□ -1.35
PTPN12-213ENST00000519553 FAM90A7PA6NKC0 464 aa6.64□□□□□ -1.35
PTPN12-213ENST00000519553 FAM90A22PA8MWA6 464 aa6.64□□□□□ -1.35
PTPN12-213ENST00000519553 FAM90A12PA8MX19 464 aa6.64□□□□□ -1.35
PTPN12-213ENST00000519553 FAM90A23PA8MXZ1 464 aa6.64□□□□□ -1.35
PTPN12-213ENST00000519553 INO80B-WBP1J3KQ70 363 aa6.64□□□□□ -1.35
PTPN12-213ENST00000519553 PEX12O00623 359 aa6.64□□□□□ -1.35
PTPN12-213ENST00000519553 DDAH2O95865 285 aa6.64□□□□□ -1.35
PTPN12-213ENST00000519553 CDK4P11802 303 aa6.64□□□□□ -1.35
PTPN12-213ENST00000519553 TNFRSF1BP20333 461 aa6.64□□□□□ -1.35
PTPN12-213ENST00000519553 CYP2J2P51589 502 aa6.64□□□□□ -1.35
PTPN12-213ENST00000519553 IL13RA2Q14627 380 aa6.64□□□□□ -1.35
PTPN12-213ENST00000519553 INPP5JQ15735 1006 aaPredicted RBP6.64□□□□□ -1.35
PTPN12-213ENST00000519553 ATG16L1Q676U5 607 aa6.64□□□□□ -1.35
PTPN12-213ENST00000519553 GJB7Q6PEY0 223 aa6.64□□□□□ -1.35
PTPN12-213ENST00000519553 NRACQ8N912 160 aa6.64□□□□□ -1.35
PTPN12-213ENST00000519553 ZNF548Q8NEK5 533 aaPredicted RBP6.64□□□□□ -1.35
PTPN12-213ENST00000519553 MPLKIPQ8TAP9 179 aa6.64□□□□□ -1.35
PTPN12-213ENST00000519553 ZNF419Q96HQ0 510 aaPredicted RBP6.64□□□□□ -1.35
PTPN12-213ENST00000519553 PHF7Q9BWX1 381 aaPredicted RBP6.64□□□□□ -1.35
PTPN12-213ENST00000519553 HIPK3Q9H422 1215 aa6.64□□□□□ -1.35
PTPN12-213ENST00000519553 SEMA4BQ9NPR2 832 aaPredicted RBP6.64□□□□□ -1.35
PTPN12-213ENST00000519553 ZBTB40Q9NUA8 1239 aa6.64□□□□□ -1.35
PTPN12-213ENST00000519553 RNF7Q9UBF6 113 aa6.64□□□□□ -1.35
PTPN12-213ENST00000519553 COG5Q9UP83 839 aa6.64□□□□□ -1.35
PTPN12-213ENST00000519553 CHRNB1P11230 501 aa6.63□□□□□ -1.35
PTPN12-213ENST00000519553 KLRC2P26717 231 aa6.63□□□□□ -1.35
PTPN12-213ENST00000519553 HNF1BP35680 557 aa6.63□□□□□ -1.35
PTPN12-213ENST00000519553 TLE2Q04725 743 aa6.63□□□□□ -1.35
PTPN12-213ENST00000519553 ALG10Q5BKT4 473 aa6.63□□□□□ -1.35
PTPN12-213ENST00000519553 ALG10BQ5I7T1 473 aa6.63□□□□□ -1.35
PTPN12-213ENST00000519553 WDR45BQ5MNZ6 344 aa6.63□□□□□ -1.35
PTPN12-213ENST00000519553 NAPEPLDQ6IQ20 393 aa6.63□□□□□ -1.35
PTPN12-213ENST00000519553 B4GALNT4Q76KP1 1039 aa6.63□□□□□ -1.35
PTPN12-213ENST00000519553 MRPL10Q7Z7H8 261 aaKnown RBP6.63□□□□□ -1.35
PTPN12-213ENST00000519553 GPSM1Q86YR5 675 aa6.63□□□□□ -1.35
PTPN12-213ENST00000519553 TMTC1Q8IUR5 882 aa6.63□□□□□ -1.35
PTPN12-213ENST00000519553 LSM14AQ8ND56 463 aaKnown RBP6.63□□□□□ -1.35
PTPN12-213ENST00000519553 SETD9Q8NE22 299 aa6.63□□□□□ -1.35
PTPN12-213ENST00000519553 NCSTNQ92542 709 aa6.63□□□□□ -1.35
PTPN12-213ENST00000519553 MAELQ96JY0 434 aaKnown RBP6.63□□□□□ -1.35
PTPN12-213ENST00000519553 CLSTN3Q9BQT9 956 aa6.63□□□□□ -1.35
PTPN12-213ENST00000519553 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.63□□□□□ -1.35
PTPN12-213ENST00000519553 ACTR5Q9H9F9 607 aaPredicted RBP6.63□□□□□ -1.35
PTPN12-213ENST00000519553 ICKQ9UPZ9 632 aa6.63□□□□□ -1.35
PTPN12-213ENST00000519553 CCDC189A1A4V9 331 aa6.62□□□□□ -1.35
PTPN12-213ENST00000519553 TMEM247A6NEH6 219 aa6.62□□□□□ -1.35
PTPN12-213ENST00000519553 ANP32CO43423 234 aa6.62□□□□□ -1.35
PTPN12-213ENST00000519553 EPN2O95208 641 aa6.62□□□□□ -1.35
PTPN12-213ENST00000519553 PYGLP06737 847 aa6.62□□□□□ -1.35
PTPN12-213ENST00000519553 PRKCHP24723 683 aa6.62□□□□□ -1.35
PTPN12-213ENST00000519553 PTPN9P43378 593 aa6.62□□□□□ -1.35
PTPN12-213ENST00000519553 TBC1D9BQ66K14 1250 aa6.62□□□□□ -1.35
PTPN12-213ENST00000519553 AAGABQ6PD74 315 aa6.62□□□□□ -1.35
PTPN12-213ENST00000519553 CERS3Q8IU89 383 aa6.62□□□□□ -1.35
PTPN12-213ENST00000519553 SLC25A41Q8N5S1 370 aa6.62□□□□□ -1.35
PTPN12-213ENST00000519553 HDAC7Q8WUI4 952 aa6.62□□□□□ -1.35
PTPN12-213ENST00000519553 FAR1Q8WVX9 515 aa6.62□□□□□ -1.35
PTPN12-213ENST00000519553 STAMQ92783 540 aa6.62□□□□□ -1.35
PTPN12-213ENST00000519553 ZNF48Q96MX3 618 aaPredicted RBP6.62□□□□□ -1.35
PTPN12-213ENST00000519553 LMAN2LQ9H0V9 348 aa6.62□□□□□ -1.35
PTPN12-213ENST00000519553 MAP6D1Q9H9H5 199 aa6.62□□□□□ -1.35
PTPN12-213ENST00000519553 PNRC2Q9NPJ4 139 aaKnown RBP6.62□□□□□ -1.35
PTPN12-213ENST00000519553 ZDHHC7Q9NXF8 308 aa6.62□□□□□ -1.35
PTPN12-213ENST00000519553 PDP2Q9P2J9 529 aa6.62□□□□□ -1.35
PTPN12-213ENST00000519553 HS3ST3B1Q9Y662 390 aa6.62□□□□□ -1.35
PTPN12-213ENST00000519553 MST1RQ04912 1400 aa6.61□□□□□ -1.35
PTPN12-213ENST00000519553 SOCS2O14508 198 aa6.61□□□□□ -1.35
PTPN12-213ENST00000519553 WEE2P0C1S8 567 aa6.61□□□□□ -1.35
PTPN12-213ENST00000519553 SLC16A2P36021 539 aa6.61□□□□□ -1.35
PTPN12-213ENST00000519553 GOLGA8FQ08AF8 430 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms