RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 DENRO43583 198 aaKnown RBP17.14■□□□□ 0.33
TSPAN17-209ENST00000515708 ATP9BO43861 1147 aa17.14■□□□□ 0.33
TSPAN17-209ENST00000515708 RPL14P50914 215 aaKnown RBP17.14■□□□□ 0.33
TSPAN17-209ENST00000515708 CSE1LP55060 971 aaKnown RBP17.14■□□□□ 0.33
TSPAN17-209ENST00000515708 SYPL2Q5VXT5 272 aa17.14■□□□□ 0.33
TSPAN17-209ENST00000515708 SEL1L3Q68CR1 1132 aa17.14■□□□□ 0.33
TSPAN17-209ENST00000515708 KCTD11Q693B1 232 aa17.14■□□□□ 0.33
TSPAN17-209ENST00000515708 KCNMB4Q86W47 210 aa17.14■□□□□ 0.33
TSPAN17-209ENST00000515708 RP9Q8TA86 221 aaKnown RBP17.14■□□□□ 0.33
TSPAN17-209ENST00000515708 CDRT15Q96T59 188 aa17.14■□□□□ 0.33
TSPAN17-209ENST00000515708 DRC3Q9H069 523 aa17.14■□□□□ 0.33
TSPAN17-209ENST00000515708 PIGVQ9NUD9 493 aa17.14■□□□□ 0.33
TSPAN17-209ENST00000515708 MAGED2Q9UNF1 606 aaPredicted RBP17.14■□□□□ 0.33
TSPAN17-209ENST00000515708 FAM72CH0Y354 149 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 PIRO00625 290 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 SMIM18P0DKX4 95 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 FLOT2Q14254 428 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 FAM72AQ5TYM5 149 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 FAM72DQ6L9T8 149 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 ALKAL1Q6UXT8 129 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 BNC2Q6ZN30 1099 aaPredicted RBP17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 FAM72BQ86X60 149 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 NDNQ99608 321 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 EPB41L1Q9H4G0 881 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 C20orf96Q9NUD7 363 aaPredicted RBP17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 MID2Q9UJV3 735 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 STAP1Q9ULZ2 295 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 H3BRB1 525 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 ZBTB24O43167 697 aaPredicted RBP17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 DNAJA2O60884 412 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 RECQL4O94761 1208 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 PGM3O95394 542 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 AMHP03971 560 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 APOA4P06727 396 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 ERCC2P18074 760 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 CCR10P46092 362 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 GRIA4P48058 902 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 MRPS22P82650 360 aaKnown RBP17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 GRIK4Q16099 956 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 ZNF423Q2M1K9 1284 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 PIGGQ5H8A4 983 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 RARS2Q5T160 578 aaKnown RBP17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 LIPMQ5VYY2 423 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 TAPT1Q6NXT6 567 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 MAMDC4Q6UXC1 1216 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 TMEM151AQ8N4L1 468 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 DRAXINQ8NBI3 349 aaPredicted RBP17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 UPF1Q92900 1129 aaKnown RBP eCLIP17.13■□□□□ 0.331e-8■■■■■ 31.7
TSPAN17-209ENST00000515708 MLPHQ9BV36 600 aaPredicted RBP17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 NXF3Q9H4D5 531 aaKnown RBP17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 TUT1Q9H6E5 874 aaKnown RBP17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 TASP1Q9H6P5 420 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 CHRAC1Q9NRG0 131 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 IARS2Q9NSE4 1012 aaKnown RBP17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 VPS28Q9UK41 221 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 SLC39A10Q9ULF5 831 aa17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 UBQLN1Q9UMX0 589 aaKnown RBP17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 G3BP2Q9UN86 482 aaKnown RBP17.13■□□□□ 0.33
TSPAN17-209ENST00000515708 OR6B1O95007 311 aa17.12■□□□□ 0.33
TSPAN17-209ENST00000515708 SBK3P0C264 359 aa17.12■□□□□ 0.33
TSPAN17-209ENST00000515708 XRCC1P18887 633 aaPredicted RBP17.12■□□□□ 0.33
TSPAN17-209ENST00000515708 CYP2B6P20813 491 aa17.12■□□□□ 0.33
TSPAN17-209ENST00000515708 CD68P34810 354 aaPredicted RBP17.12■□□□□ 0.33
TSPAN17-209ENST00000515708 PPARGP37231 505 aaPredicted RBP17.12■□□□□ 0.33
TSPAN17-209ENST00000515708 NDUFV1P49821 464 aa17.12■□□□□ 0.33
TSPAN17-209ENST00000515708 TMEM62Q0P6H9 643 aa17.12■□□□□ 0.33
TSPAN17-209ENST00000515708 CYLC2Q14093 348 aaPredicted RBP17.12■□□□□ 0.33
TSPAN17-209ENST00000515708 CNGA3Q16281 694 aa17.12■□□□□ 0.33
TSPAN17-209ENST00000515708 ARL13AQ5H913 290 aaPredicted RBP17.12■□□□□ 0.33
TSPAN17-209ENST00000515708 ZYG11AQ6WRX3 759 aa17.12■□□□□ 0.33
TSPAN17-209ENST00000515708 RNF169Q8NCN4 708 aa17.12■□□□□ 0.33
TSPAN17-209ENST00000515708 APPL2Q8NEU8 664 aa17.12■□□□□ 0.33
TSPAN17-209ENST00000515708 RDH11Q8TC12 318 aa17.12■□□□□ 0.33
TSPAN17-209ENST00000515708 WNT8BQ93098 351 aa17.12■□□□□ 0.33
TSPAN17-209ENST00000515708 RCN3Q96D15 328 aa17.12■□□□□ 0.33
TSPAN17-209ENST00000515708 C1QTNF1Q9BXJ1 281 aa17.12■□□□□ 0.33
TSPAN17-209ENST00000515708 NUF2Q9BZD4 464 aa17.12■□□□□ 0.33
TSPAN17-209ENST00000515708 MROH8Q9H579 483 aa17.12■□□□□ 0.33
TSPAN17-209ENST00000515708 ZNF385DQ9H6B1 395 aa17.12■□□□□ 0.33
TSPAN17-209ENST00000515708 GDAP2Q9NXN4 497 aa17.12■□□□□ 0.33
TSPAN17-209ENST00000515708 UBAP1Q9NZ09 502 aa17.12■□□□□ 0.33
TSPAN17-209ENST00000515708 ERI2A8K979 691 aaKnown RBP17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 GOLGA8TH3BQL2 631 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 SLC22A2O15244 555 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 GRID2O43424 1007 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 PIGNO95427 931 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 TFEBP19484 476 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 AKAP5P24588 427 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 PMLP29590 882 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 CSRP3P50461 194 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 PPIDQ08752 370 aaKnown RBP17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 CATSPER4Q7RTX7 472 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 SPATA24Q86W54 205 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 TMEM126BQ8IUX1 230 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 CPSF7Q8N684 471 aaKnown RBP17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 LRGUKQ96M69 825 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 APOL2Q9BQE5 337 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 DUSP16Q9BY84 665 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 GBA3Q9H227 469 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 NDUFA13Q9P0J0 144 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms