RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 SLC6A17Q9H1V8 727 aa26.57■■□□□ 1.84
DDR1-279ENST00000515529 SMG5Q9UPR3 1016 aaKnown RBP26.57■■□□□ 1.84
DDR1-279ENST00000515529 INVSQ9Y283 1065 aa26.57■■□□□ 1.84
DDR1-279ENST00000515529 MAP3K13O43283 966 aa26.56■■□□□ 1.84
DDR1-279ENST00000515529 SIN3BO75182 1162 aa26.56■■□□□ 1.84
DDR1-279ENST00000515529 ACVRL1P37023 503 aa26.56■■□□□ 1.84
DDR1-279ENST00000515529 CDH6P55285 790 aa26.56■■□□□ 1.84
DDR1-279ENST00000515529 GEMIN4P57678 1058 aaKnown RBP26.56■■□□□ 1.84
DDR1-279ENST00000515529 YBEYP58557 167 aaPredicted RBP26.56■■□□□ 1.84
DDR1-279ENST00000515529 TCEAL1Q15170 157 aa26.56■■□□□ 1.84
DDR1-279ENST00000515529 LINGO4Q6UY18 593 aa26.56■■□□□ 1.84
DDR1-279ENST00000515529 KIAA1328Q86T90 577 aa26.56■■□□□ 1.84
DDR1-279ENST00000515529 CACUL1Q86Y37 369 aa26.56■■□□□ 1.84
DDR1-279ENST00000515529 SH2D3CQ8N5H7 860 aa26.56■■□□□ 1.84
DDR1-279ENST00000515529 MKRN2Q9H000 416 aaKnown RBP26.56■■□□□ 1.84
DDR1-279ENST00000515529 MTG2Q9H4K7 406 aa26.56■■□□□ 1.84
DDR1-279ENST00000515529 CWC15Q9P013 229 aaKnown RBP26.56■■□□□ 1.84
DDR1-279ENST00000515529 HS3ST2Q9Y278 367 aa26.56■■□□□ 1.84
DDR1-279ENST00000515529 FANCMQ8IYD8 2048 aa26.55■■□□□ 1.84
DDR1-279ENST00000515529 ATP9BO43861 1147 aa26.55■■□□□ 1.84
DDR1-279ENST00000515529 ERCC2P18074 760 aa26.55■■□□□ 1.84
DDR1-279ENST00000515529 GLDCP23378 1020 aa26.55■■□□□ 1.84
DDR1-279ENST00000515529 SLC1A1P43005 524 aa26.55■■□□□ 1.84
DDR1-279ENST00000515529 CLCN6P51797 869 aa26.55■■□□□ 1.84
DDR1-279ENST00000515529 COPAP53621 1224 aa26.55■■□□□ 1.84
DDR1-279ENST00000515529 SLC20A2Q08357 652 aa26.55■■□□□ 1.84
DDR1-279ENST00000515529 DLG2Q15700 870 aa26.55■■□□□ 1.84
DDR1-279ENST00000515529 PARP15Q460N3 678 aa26.55■■□□□ 1.84
DDR1-279ENST00000515529 ZNF776Q68DI1 518 aaPredicted RBP26.55■■□□□ 1.84
DDR1-279ENST00000515529 TXNRD3NBQ6F5E7 133 aa26.55■■□□□ 1.84
DDR1-279ENST00000515529 MAP7D3Q8IWC1 876 aa26.55■■□□□ 1.84
DDR1-279ENST00000515529 UMODL1-AS1Q8N2C9 162 aa26.55■■□□□ 1.84
DDR1-279ENST00000515529 KCTD6Q8NC69 237 aa26.55■■□□□ 1.84
DDR1-279ENST00000515529 RLN3Q8WXF3 142 aa26.55■■□□□ 1.84
DDR1-279ENST00000515529 CCDC114Q96M63 670 aa26.55■■□□□ 1.84
DDR1-279ENST00000515529 FARP1Q9Y4F1 1045 aaPredicted RBP26.55■■□□□ 1.84
DDR1-279ENST00000515529 A0A0A6YYK5 440 aaPredicted RBP26.54■■□□□ 1.84
DDR1-279ENST00000515529 RASA4BC9J798 803 aa26.54■■□□□ 1.84
DDR1-279ENST00000515529 RASA4O43374 803 aa26.54■■□□□ 1.84
DDR1-279ENST00000515529 SPOPO43791 374 aa26.54■■□□□ 1.84
DDR1-279ENST00000515529 SRCP12931 536 aa26.54■■□□□ 1.84
DDR1-279ENST00000515529 P2RY2P41231 377 aa26.54■■□□□ 1.84
DDR1-279ENST00000515529 NAP1L1P55209 391 aaKnown RBP26.54■■□□□ 1.84
DDR1-279ENST00000515529 ELF2Q15723 593 aa26.54■■□□□ 1.84
DDR1-279ENST00000515529 LPAL2Q16609 132 aa26.54■■□□□ 1.84
DDR1-279ENST00000515529 C9orf64Q5T6V5 341 aa26.54■■□□□ 1.84
DDR1-279ENST00000515529 POLNQ7Z5Q5 900 aa26.54■■□□□ 1.84
DDR1-279ENST00000515529 CPNE8Q86YQ8 564 aa26.54■■□□□ 1.84
DDR1-279ENST00000515529 TMEM139Q8IV31 216 aa26.54■■□□□ 1.84
DDR1-279ENST00000515529 ACRBPQ8NEB7 543 aa26.54■■□□□ 1.84
DDR1-279ENST00000515529 ACE2Q9BYF1 805 aaPredicted RBP26.54■■□□□ 1.84
DDR1-279ENST00000515529 PCDH18Q9HCL0 1135 aa26.54■■□□□ 1.84
DDR1-279ENST00000515529 CYP8B1Q9UNU6 501 aa26.54■■□□□ 1.84
DDR1-279ENST00000515529 CKAP5Q14008 2032 aa26.53■■□□□ 1.84
DDR1-279ENST00000515529 ZSCAN5CA6NGD5 496 aaPredicted RBP26.53■■□□□ 1.84
DDR1-279ENST00000515529 DCLK1O15075 740 aa26.53■■□□□ 1.84
DDR1-279ENST00000515529 NRDCO43847 1150 aa26.53■■□□□ 1.84
DDR1-279ENST00000515529 BNIP3LO60238 219 aa26.53■■□□□ 1.84
DDR1-279ENST00000515529 MT-CO1P00395 513 aa26.53■■□□□ 1.84
DDR1-279ENST00000515529 DNTTP04053 509 aa26.53■■□□□ 1.84
DDR1-279ENST00000515529 RECQLP46063 649 aaPredicted RBP26.53■■□□□ 1.84
DDR1-279ENST00000515529 NDST2P52849 883 aa26.53■■□□□ 1.84
DDR1-279ENST00000515529 TAS2R40P59535 323 aa26.53■■□□□ 1.84
DDR1-279ENST00000515529 ELAVL3Q14576 367 aaKnown RBP26.53■■□□□ 1.84
DDR1-279ENST00000515529 TTC31Q49AM3 519 aaPredicted RBP26.53■■□□□ 1.84
DDR1-279ENST00000515529 ODF2Q5BJF6 829 aa26.53■■□□□ 1.84
DDR1-279ENST00000515529 ANP32BQ92688 251 aaKnown RBP26.53■■□□□ 1.84
DDR1-279ENST00000515529 HMCESQ96FZ2 354 aa26.53■■□□□ 1.84
DDR1-279ENST00000515529 RCOR3Q9P2K3 495 aaPredicted RBP26.53■■□□□ 1.84
DDR1-279ENST00000515529 TFR2Q9UP52 801 aa26.53■■□□□ 1.84
DDR1-279ENST00000515529 ARHGAP42A6NI28 874 aa26.52■■□□□ 1.84
DDR1-279ENST00000515529 KDELR3O43731 214 aa26.52■■□□□ 1.84
DDR1-279ENST00000515529 ZMPSTE24O75844 475 aa26.52■■□□□ 1.84
DDR1-279ENST00000515529 RHOBTB1O94844 696 aa26.52■■□□□ 1.84
DDR1-279ENST00000515529 SERPINH1P50454 418 aaKnown RBP26.52■■□□□ 1.84
DDR1-279ENST00000515529 VAV2P52735 878 aa26.52■■□□□ 1.84
DDR1-279ENST00000515529 HADHBP55084 474 aaKnown RBP26.52■■□□□ 1.84
DDR1-279ENST00000515529 ZBTB16Q05516 673 aa26.52■■□□□ 1.84
DDR1-279ENST00000515529 SFSWAPQ12872 951 aaKnown RBP26.52■■□□□ 1.84
DDR1-279ENST00000515529 DPYSQ14117 519 aa26.52■■□□□ 1.84
DDR1-279ENST00000515529 PDK2Q15119 407 aa26.52■■□□□ 1.84
DDR1-279ENST00000515529 MAP7D1Q3KQU3 841 aa26.52■■□□□ 1.84
DDR1-279ENST00000515529 TMCO3Q6UWJ1 677 aa26.52■■□□□ 1.84
DDR1-279ENST00000515529 SLC36A4Q6YBV0 504 aa26.52■■□□□ 1.84
DDR1-279ENST00000515529 Q6ZVU0 165 aa26.52■■□□□ 1.84
DDR1-279ENST00000515529 DSG4Q86SJ6 1040 aa26.52■■□□□ 1.84
DDR1-279ENST00000515529 METTL3Q86U44 580 aaKnown RBP26.52■■□□□ 1.84
DDR1-279ENST00000515529 STK40Q8N2I9 435 aa26.52■■□□□ 1.84
DDR1-279ENST00000515529 LZTR1Q8N653 840 aa26.52■■□□□ 1.84
DDR1-279ENST00000515529 CCDC112Q8NEF3 446 aa26.52■■□□□ 1.84
DDR1-279ENST00000515529 FRS2Q8WU20 508 aa26.52■■□□□ 1.84
DDR1-279ENST00000515529 OR8D1Q8WZ84 308 aa26.52■■□□□ 1.84
DDR1-279ENST00000515529 PTPRN2Q92932 1015 aa26.52■■□□□ 1.84
DDR1-279ENST00000515529 CELF6Q96J87 481 aaKnown RBP26.52■■□□□ 1.84
DDR1-279ENST00000515529 CALR3Q96L12 384 aaKnown RBP26.52■■□□□ 1.84
DDR1-279ENST00000515529 CSPG4P5Q96PW8 444 aa26.52■■□□□ 1.84
DDR1-279ENST00000515529 CALN1Q9BXU9 219 aa26.52■■□□□ 1.84
DDR1-279ENST00000515529 RSPH9Q9H1X1 276 aaPredicted RBP26.52■■□□□ 1.84
DDR1-279ENST00000515529 GMEB2Q9UKD1 530 aa26.52■■□□□ 1.84
DDR1-279ENST00000515529 CXorf51AA0A1B0GTR3 108 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms