RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 NFIL3Q16649 462 aa5.58□□□□□ -1.52
HMGCS1-207ENST00000514610 SLC4A8Q2Y0W8 1093 aa5.58□□□□□ -1.52
HMGCS1-207ENST00000514610 PLK5Q496M5 336 aa5.58□□□□□ -1.52
HMGCS1-207ENST00000514610 FAM171A1Q5VUB5 890 aa5.58□□□□□ -1.52
HMGCS1-207ENST00000514610 TBC1D22AQ8WUA7 517 aa5.58□□□□□ -1.52
HMGCS1-207ENST00000514610 RUFY2Q8WXA3 655 aa5.58□□□□□ -1.52
HMGCS1-207ENST00000514610 EME1Q96AY2 570 aa5.58□□□□□ -1.52
HMGCS1-207ENST00000514610 FUZQ9BT04 418 aa5.58□□□□□ -1.52
HMGCS1-207ENST00000514610 AAMDCQ9H7C9 122 aa5.58□□□□□ -1.52
HMGCS1-207ENST00000514610 TTC12Q9H892 705 aaPredicted RBP5.58□□□□□ -1.52
HMGCS1-207ENST00000514610 TMEM45AQ9NWC5 275 aa5.58□□□□□ -1.52
HMGCS1-207ENST00000514610 ICKQ9UPZ9 632 aa5.58□□□□□ -1.52
HMGCS1-207ENST00000514610 LAMP3Q9UQV4 416 aa5.58□□□□□ -1.52
HMGCS1-207ENST00000514610 TRBV5-3A0A0A0MS03 114 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 A0A0G2JK05 382 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 TARSL2A2RTX5 802 aaKnown RBP5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 RHODO00212 210 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 PER2O15055 1255 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 WDHD1O75717 1129 aaPredicted RBP5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 DDAH2O95865 285 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 HLA-DQA2P01906 255 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 CD38P28907 300 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 CCT4P50991 539 aaKnown RBP5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 MPP1Q00013 466 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 NAA25Q14CX7 972 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 C5orf22Q49AR2 442 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 Q4G0T1 1027 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 ASPHD1Q5U4P2 390 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 AADACL2Q6P093 401 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 SYCE2Q6PIF2 218 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 ZNF793Q6ZN11 406 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 DEF8Q6ZN54 512 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 CYB5R4Q7L1T6 521 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 MON1AQ86VX9 555 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 CCDC25Q86WR0 208 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 DDIASQ8IXT1 998 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 SRRM1Q8IYB3 904 aaKnown RBP5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 RFWD2Q8NHY2 731 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 RNF125Q96EQ8 232 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 MPP4Q96JB8 637 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 EYA3Q99504 573 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 LBHD1Q9BQE6 289 aaPredicted RBP5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 NPLQ9BXD5 320 aaPredicted RBP5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 PAIP1Q9H074 479 aaKnown RBP5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 SPAG4Q9NPE6 437 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 PAPOLBQ9NRJ5 636 aaKnown RBP5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 NLKQ9UBE8 527 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 ANAPC4Q9UJX5 808 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 SUFUQ9UMX1 484 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 TMEM98Q9Y2Y6 226 aa5.57□□□□□ -1.52
HMGCS1-207ENST00000514610 KIR2DS5A0A0G2JLQ3 304 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 CCDC196A0A1B0GTZ2 297 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 FOXO6A8MYZ6 492 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 F8W810 466 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 KIR2DS3K7RE56 304 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 TLR2O60603 784 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 CNOT3O75175 753 aaKnown RBP5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 TULP3O75386 442 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 CYP19A1P11511 503 aaPredicted RBP5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 KELP23276 732 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 KLRC2P26717 231 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 CHRNA5P30532 468 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 CIITAP33076 1130 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 CYP2J2P51589 502 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 ID2Q02363 134 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 PKP1Q13835 747 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 SLC18A3Q16572 532 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 BAK1Q16611 211 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 COLEC12Q5KU26 742 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 ZNF626Q68DY1 528 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 TTLL5Q6EMB2 1281 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 SLC22A25Q6T423 547 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 ADGRG6Q86SQ4 1221 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 TRIM74Q86UV6 250 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 TRIM73Q86UV7 250 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 TEX19Q8NA77 164 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 PCYOX1LQ8NBM8 494 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 RAB40AQ8WXH6 277 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 ZUFSPQ96AP4 578 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 FRG2BQ96QU4 278 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 CD180Q99467 661 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 SLC26A6Q9BXS9 759 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 MAF1Q9H063 256 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 HIPK3Q9H422 1215 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 CXorf56Q9H5V9 222 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 EPHX3Q9H6B9 360 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 SEMA4BQ9NPR2 832 aaPredicted RBP5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 ALKBH4Q9NXW9 302 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 CNOT7Q9UIV1 285 aaKnown RBP5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 AGO2Q9UKV8 859 aaKnown RBP5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 ARHGAP26Q9UNA1 814 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 OSGIN2Q9Y236 505 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 CYP46A1Q9Y6A2 500 aa5.56□□□□□ -1.52
HMGCS1-207ENST00000514610 TTBK1Q5TCY1 1321 aaPredicted RBP5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 A0A1W2PPC1 479 aa5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 DPPA5A6NC42 116 aa5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 OR6C68A6NDL8 312 aa5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 EPB41L2O43491 1005 aaKnown RBP5.55□□□□□ -1.52
HMGCS1-207ENST00000514610 HBP1O60381 514 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms