RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 FOXD2O60548 495 aaPredicted RBP12.78□□□□□ -0.36
PTCD2-209ENST00000511752 SNAP91O60641 907 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 RAMP2O60895 175 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 MPLP40238 635 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 DPP6P42658 865 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 ZNF135P52742 658 aaPredicted RBP12.78□□□□□ -0.36
PTCD2-209ENST00000511752 RPS14P62263 151 aaKnown RBP12.78□□□□□ -0.36
PTCD2-209ENST00000511752 SEMA3BQ13214 749 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 ELAVL3Q14576 367 aaKnown RBP12.78□□□□□ -0.36
PTCD2-209ENST00000511752 DLG2Q15700 870 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 DSG4Q86SJ6 1040 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 TMEFF1Q8IYR6 380 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 SH2D3CQ8N5H7 860 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 NIPA2Q8N8Q9 360 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 RTL3Q8N8U3 475 aaKnown RBP12.78□□□□□ -0.36
PTCD2-209ENST00000511752 ATP11CQ8NB49 1132 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 ZNF564Q8TBZ8 553 aaPredicted RBP12.78□□□□□ -0.36
PTCD2-209ENST00000511752 PTPRN2Q92932 1015 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 ARHGEF2Q92974 986 aaKnown RBP12.78□□□□□ -0.36
PTCD2-209ENST00000511752 ARHGEF26Q96DR7 871 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 CCDC114Q96M63 670 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 PEBP4Q96S96 227 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 CD93Q9NPY3 652 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 SEMA4GQ9NTN9 838 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 GPATCH2LQ9NWQ4 482 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 WSB2Q9NYS7 404 aaPredicted RBP12.78□□□□□ -0.36
PTCD2-209ENST00000511752 UVRAGQ9P2Y5 699 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 LCMT1Q9UIC8 334 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 HPCAL4Q9UM19 191 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 NEU3Q9UQ49 428 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 NCKAP1Q9Y2A7 1128 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 FARP1Q9Y4F1 1045 aaPredicted RBP12.78□□□□□ -0.36
PTCD2-209ENST00000511752 NUP205Q92621 2012 aa12.78□□□□□ -0.36
PTCD2-209ENST00000511752 ABCA7Q8IZY2 2146 aa12.77□□□□□ -0.36
PTCD2-209ENST00000511752 TNRC6BQ9UPQ9 1833 aaKnown RBP12.77□□□□□ -0.37
PTCD2-209ENST00000511752 CXorf51AA0A1B0GTR3 108 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 BCLAF3A2AJT9 711 aaKnown RBP12.77□□□□□ -0.37
PTCD2-209ENST00000511752 WASH4PA8MWX3 477 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 EEF2KO00418 725 aaKnown RBP12.77□□□□□ -0.37
PTCD2-209ENST00000511752 ALOX15BO15296 676 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 DAPK3O43293 454 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 IGLV3-19P01714 112 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 TMEM253P0C7T8 217 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 C7P10643 843 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 SRCP12931 536 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 CLCN6P51797 869 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 GEMIN4P57678 1058 aaKnown RBP12.77□□□□□ -0.37
PTCD2-209ENST00000511752 SLC20A2Q08357 652 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 POLD3Q15054 466 aaPredicted RBP12.77□□□□□ -0.37
PTCD2-209ENST00000511752 CST6Q15828 149 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 CSRP2Q16527 193 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 BOLA3Q53S33 107 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 PPP6R3Q5H9R7 873 aaPredicted RBP12.77□□□□□ -0.37
PTCD2-209ENST00000511752 LYSMD4Q5XG99 296 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 ARMCX6Q7L4S7 300 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 FAM124AQ86V42 546 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 STK40Q8N2I9 435 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 TC2NQ8N9U0 490 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 GANCQ8TET4 914 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 FRS2Q8WU20 508 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 OR8D1Q8WZ84 308 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 FOXJ1Q92949 421 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 TOE1Q96GM8 510 aaKnown RBP12.77□□□□□ -0.37
PTCD2-209ENST00000511752 PACSIN1Q9BY11 444 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 SPTLC3Q9NUV7 552 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 NDFIP2Q9NV92 336 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 CHD5Q8TDI0 1954 aa12.77□□□□□ -0.37
PTCD2-209ENST00000511752 BNIP3LO60238 219 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 ZMPSTE24O75844 475 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 ADH1BP00325 375 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 MT-CO1P00395 513 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 IL1BP01584 269 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 ZNF806P0C7X5 589 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 VAV1P15498 845 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 GLDCP23378 1020 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 SLC8A1P32418 973 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 ARL4AP40617 200 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 PTGER3P43115 390 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 SSR1P43307 286 aaKnown RBP12.76□□□□□ -0.37
PTCD2-209ENST00000511752 RECQLP46063 649 aaPredicted RBP12.76□□□□□ -0.37
PTCD2-209ENST00000511752 PSMD8P48556 350 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 YBEYP58557 167 aaPredicted RBP12.76□□□□□ -0.37
PTCD2-209ENST00000511752 LMNB2Q03252 620 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 ZNF33AQ06730 810 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 CA9Q16790 459 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 HADHQ16836 314 aaKnown RBP12.76□□□□□ -0.37
PTCD2-209ENST00000511752 DAB2IPQ5VWQ8 1189 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 C22orf39Q6P5X5 142 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 LINGO4Q6UY18 593 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 RFX8Q6ZV50 586 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 Q6ZVU0 165 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 CYP4V2Q6ZWL3 525 aaPredicted RBP12.76□□□□□ -0.37
PTCD2-209ENST00000511752 USP30Q70CQ3 517 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 ZNF354CQ86Y25 554 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 MMAAQ8IVH4 418 aaKnown RBP12.76□□□□□ -0.37
PTCD2-209ENST00000511752 C12orf50Q8NA57 414 aaPredicted RBP12.76□□□□□ -0.37
PTCD2-209ENST00000511752 BTBD6Q96KE9 485 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 KCTD15Q96SI1 283 aaPredicted RBP12.76□□□□□ -0.37
PTCD2-209ENST00000511752 OMDQ99983 421 aa12.76□□□□□ -0.37
PTCD2-209ENST00000511752 GPR174Q9BXC1 333 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms