RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 TSPAN19P0C672 248 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 SRGNP10124 158 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 CXCL8P10145 99 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 TGFB3P10600 412 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 ACADLP28330 430 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 HNRNPH2P55795 449 aaKnown RBP5.87□□□□□ -1.47
USP38-203ENST00000511739 IRX1P78414 480 aaPredicted RBP5.87□□□□□ -1.47
USP38-203ENST00000511739 BEX3Q00994 111 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 PTPN11Q06124 597 aaPredicted RBP5.87□□□□□ -1.47
USP38-203ENST00000511739 GPAT3Q53EU6 434 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 BHLHB9Q6PI77 547 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 RASAL3Q86YV0 1011 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 CPA6Q8N4T0 437 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 COLGALT1Q8NBJ5 622 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 TSPAN14Q8NG11 270 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 RXFP2Q8WXD0 754 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 OR8D1Q8WZ84 308 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 CDADC1Q9BWV3 514 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 ZNF518BQ9C0D4 1074 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 SLC35C2Q9NQQ7 365 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 ING3Q9NXR8 418 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 NDRG2Q9UN36 371 aaKnown RBP5.87□□□□□ -1.47
USP38-203ENST00000511739 PCDHA11Q9Y5I1 949 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 SNX13Q9Y5W8 968 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 NFASCO94856 1347 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 KDM3BQ7LBC6 1761 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 MAGEB16A2A368 324 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 IGF2BP3O00425 579 aaKnown RBP eCLIP5.87□□□□□ -1.47
USP38-203ENST00000511739 KIF1CO43896 1103 aaKnown RBP5.87□□□□□ -1.47
USP38-203ENST00000511739 MAGEC1O60732 1142 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 GIMD1P0DJR0 217 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 PRG2P13727 222 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 DGKAP23743 735 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 HNF4AP41235 474 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 FKBP1AP62942 108 aaKnown RBP5.87□□□□□ -1.47
USP38-203ENST00000511739 IRF8Q02556 426 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 SUZ12Q15022 739 aaKnown RBP5.87□□□□□ -1.47
USP38-203ENST00000511739 FAM98BQ52LJ0 330 aaKnown RBP5.87□□□□□ -1.47
USP38-203ENST00000511739 ERMARDQ5T6L9 678 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 NT5DC1Q5TFE4 455 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 PLPP4Q5VZY2 271 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 IQSEC1Q6DN90 963 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 RASSF6Q6ZTQ3 369 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 DET1Q7L5Y6 550 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 RASGRP2Q7LDG7 609 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 PAGE2Q7Z2X7 111 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 STK40Q8N2I9 435 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 FBXO22Q8NEZ5 403 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 ZNF563Q8TA94 476 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 BSNDQ8WZ55 320 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 NSL1Q96IY1 281 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 DEFB118Q96PH6 123 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 ROPN1BQ9BZX4 212 aaPredicted RBP5.87□□□□□ -1.47
USP38-203ENST00000511739 ROPN1Q9HAT0 212 aaPredicted RBP5.87□□□□□ -1.47
USP38-203ENST00000511739 PTPRHQ9HD43 1115 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 AGPAT3Q9NRZ7 376 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 ATAD3AQ9NVI7 634 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 HCN3Q9P1Z3 774 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 GAKO14976 1311 aa5.87□□□□□ -1.47
USP38-203ENST00000511739 CD3EAPO15446 510 aaKnown RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 SNUPNO95149 360 aaKnown RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 TOP3BO95985 862 aaKnown RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 CSH1P0DML2 217 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 CSH2P0DML3 217 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 BDNFP23560 247 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 GSSP48637 474 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 TMED10P49755 219 aaKnown RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 CDH8P55286 799 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 HSPA14Q0VDF9 509 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 CDH17Q12864 832 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 GRB14Q14449 540 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 TRIM16LQ309B1 348 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 TFDP3Q5H9I0 405 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 KIAA0408Q6ZU52 694 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 IKBIPQ70UQ0 350 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 TXNRD3Q86VQ6 643 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 C12orf50Q8NA57 414 aaPredicted RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 ATL1Q8WXF7 558 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 CENPIQ92674 756 aaPredicted RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 ZDHHC15Q96MV8 337 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 FTHL17Q9BXU8 183 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 FAM126AQ9BYI3 521 aaPredicted RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 PXMP2Q9NR77 195 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 TMEM51Q9NW97 253 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 SYNPO2Q9UMS6 1093 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 AP4S1Q9Y587 144 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 ADM5C9JUS6 153 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 RGS14O43566 566 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 GLUD1P00367 558 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 PNMA6AP0CW24 399 aaPredicted RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 ALAS2P22557 587 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 WARSP23381 471 aaKnown RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 HOXA10P31260 410 aaPredicted RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 ELOAQ14241 798 aaKnown RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 TRIM25Q14258 630 aaKnown RBP5.86□□□□□ -1.47
USP38-203ENST00000511739 ZMYND11Q15326 602 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 TMEM164Q5U3C3 297 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 EID3Q8N140 333 aa5.86□□□□□ -1.47
USP38-203ENST00000511739 JSRP1Q96MG2 331 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms