RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 ACBD5Q5T8D3 534 aaPredicted RBP15.15■□□□□ 0.02
USP38-202ENST00000510377 PIGZQ86VD9 579 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 C18orf25Q96B23 403 aaPredicted RBP15.15■□□□□ 0.02
USP38-202ENST00000510377 OXCT2Q9BYC2 517 aaPredicted RBP15.15■□□□□ 0.02
USP38-202ENST00000510377 MINDY3Q9H8M7 445 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 C6orf203Q9P0P8 240 aaPredicted RBP15.15■□□□□ 0.02
USP38-202ENST00000510377 MYRFQ9Y2G1 1151 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 PAPPAQ13219 1627 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 SMCHD1A6NHR9 2005 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 A0A088AWK7 358 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 PABPN1LA6NDY0 278 aaKnown RBP15.15■□□□□ 0.02
USP38-202ENST00000510377 HCRTO43612 131 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 PTPN7P35236 360 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 PPARGP37231 505 aaPredicted RBP15.15■□□□□ 0.02
USP38-202ENST00000510377 ATP1A4Q13733 1029 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 TAF1CQ15572 869 aaPredicted RBP15.15■□□□□ 0.02
USP38-202ENST00000510377 LSM12Q3MHD2 195 aaKnown RBP15.15■□□□□ 0.02
USP38-202ENST00000510377 OTUD3Q5T2D3 398 aaPredicted RBP15.15■□□□□ 0.02
USP38-202ENST00000510377 FSTL4Q6MZW2 842 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 LCLAT1Q6UWP7 414 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 CLEC4FQ8N1N0 589 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 NRBF2Q96F24 287 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 SIGLEC10Q96LC7 697 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 SEPHS2Q99611 448 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 TLE6Q9H808 572 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 EURLQ9NYK6 297 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 ZNF214Q9UL59 606 aaPredicted RBP15.15■□□□□ 0.02
USP38-202ENST00000510377 KLRG2A4D1S0 409 aaPredicted RBP15.15■□□□□ 0.02
USP38-202ENST00000510377 KLF11O14901 512 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 EDN1P05305 212 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 ERCC2P18074 760 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 TAF6P49848 677 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 CATSPERGQ6ZRH7 1159 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 NCLNQ969V3 563 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 RTKNQ9BST9 563 aa15.15■□□□□ 0.02
USP38-202ENST00000510377 NADK2Q4G0N4 442 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 PDSS2Q86YH6 399 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 PSTKQ8IV42 348 aaKnown RBP15.14■□□□□ 0.01
USP38-202ENST00000510377 PQLC3Q8N755 202 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 PHC3Q8NDX5 983 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 CCDC106Q9BWC9 280 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 DPEP3Q9H4B8 488 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 CDHR5Q9HBB8 845 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 PREBQ9HCU5 417 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 SETD4Q9NVD3 440 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 PKD2L2Q9NZM6 624 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 KCNU1A8MYU2 1149 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 TFEBP19484 476 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 USP29Q9HBJ7 922 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 PDGFCQ9NRA1 345 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 MORF4L1Q9UBU8 362 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 RAP2CQ9Y3L5 183 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 NUMBLQ9Y6R0 609 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 SCN7AQ01118 1682 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 INPP4BO15327 924 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 DYNC1LI2O43237 492 aaPredicted RBP15.14■□□□□ 0.01
USP38-202ENST00000510377 CRTAMO95727 393 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 ZNF23P17027 643 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 TPSB2P20231 275 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 ZNF132P52740 706 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 TPSAB1Q15661 275 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 KYAT1Q16773 422 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 PITRM1Q5JRX3 1037 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 C6orf10Q5SRN2 563 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 LRRC8BQ6P9F7 803 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 UBE2OQ9C0C9 1292 aaKnown RBP15.14■□□□□ 0.01
USP38-202ENST00000510377 PCDHAC1Q9H158 963 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 LIN28AQ9H9Z2 209 aaKnown RBP15.14■□□□□ 0.01
USP38-202ENST00000510377 EGFL7Q9UHF1 273 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 CROTQ9UKG9 612 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 NUDT5Q9UKK9 219 aa15.14■□□□□ 0.01
USP38-202ENST00000510377 TIPRLO75663 272 aa15.13■□□□□ 0.01
USP38-202ENST00000510377 CHEK2O96017 543 aa15.13■□□□□ 0.01
USP38-202ENST00000510377 DHFR2Q86XF0 187 aa15.13■□□□□ 0.01
USP38-202ENST00000510377 ANKRD13AQ8IZ07 590 aa15.13■□□□□ 0.01
USP38-202ENST00000510377 UBR7Q8N806 425 aa15.13■□□□□ 0.01
USP38-202ENST00000510377 C20orf27Q9GZN8 174 aa15.13■□□□□ 0.01
USP38-202ENST00000510377 NOL11Q9H8H0 719 aaKnown RBP15.13■□□□□ 0.01
USP38-202ENST00000510377 GOLGA2P5Q9HBQ8 144 aa15.13■□□□□ 0.01
USP38-202ENST00000510377 FAM95CA0A1B0GW59 222 aa15.13■□□□□ 0.01
USP38-202ENST00000510377 NCF1BA6NI72 391 aaPredicted RBP15.13■□□□□ 0.01
USP38-202ENST00000510377 FAM159BA6NKW6 160 aa15.13■□□□□ 0.01
USP38-202ENST00000510377 NCF1CA8MVU1 366 aaPredicted RBP15.13■□□□□ 0.01
USP38-202ENST00000510377 PSMD12O00232 456 aaPredicted RBP15.13■□□□□ 0.01
USP38-202ENST00000510377 LTFP02788 710 aa15.13■□□□□ 0.01
USP38-202ENST00000510377 TGFB3P10600 412 aa15.13■□□□□ 0.01
USP38-202ENST00000510377 NCF1P14598 390 aaPredicted RBP15.13■□□□□ 0.01
USP38-202ENST00000510377 YBX3P16989 372 aaKnown RBP eCLIP15.13■□□□□ 0.014e-7■■■■■ 27.3
USP38-202ENST00000510377 AOC1P19801 751 aa15.13■□□□□ 0.01
USP38-202ENST00000510377 OAZ1P54368 228 aa15.13■□□□□ 0.01
USP38-202ENST00000510377 NR1H2P55055 460 aa15.13■□□□□ 0.01
USP38-202ENST00000510377 GRM3Q14832 879 aa15.13■□□□□ 0.01
USP38-202ENST00000510377 MBLAC2Q68D91 279 aa15.13■□□□□ 0.01
USP38-202ENST00000510377 EGFL6Q8IUX8 553 aa15.13■□□□□ 0.01
USP38-202ENST00000510377 RP9Q8TA86 221 aaKnown RBP15.13■□□□□ 0.01
USP38-202ENST00000510377 CCDC97Q96F63 343 aaPredicted RBP15.13■□□□□ 0.01
USP38-202ENST00000510377 STN1Q9H668 368 aaKnown RBP15.13■□□□□ 0.01
USP38-202ENST00000510377 CYLDQ9NQC7 956 aa15.13■□□□□ 0.01
USP38-202ENST00000510377 SIX4Q9UIU6 781 aa15.13■□□□□ 0.01
USP38-202ENST00000510377 PDE4DIPQ5VU43 2346 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms