RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 SLC45A4Q5BKX6 768 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 NAA35Q5VZE5 725 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 PCDHB18PQ96TA0 734 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 OMDQ99983 421 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 STK33Q9BYT3 514 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 SIK2Q9H0K1 926 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 NEUROG2Q9H2A3 272 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 CAAP1Q9H8G2 361 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 NLRC4Q9NPP4 1024 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 FBXL12Q9NXK8 326 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 ARHGEF38Q9NXL2 777 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 ZNF212Q9UDV6 495 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 TMEM59LQ9UK28 342 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 SARDHQ9UL12 918 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 A0A1B0GVM2 712 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 A0A1W2PPC4 97 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 TCAF2A6NFQ2 919 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 FAM47DPA6NHR8 397 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 K7ERQ8 282 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 YKT6O15498 198 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 SNAP91O60641 907 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 MT-CO1P00395 513 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 WNT1P04628 370 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 GLDCP23378 1020 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 DRD3P35462 400 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 PLK1P53350 603 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 COPB1P53618 953 aaKnown RBP11.21□□□□□ -0.61
RNF4-212ENST00000509258 GALCP54803 685 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 SNX16P57768 344 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 POLR2FP61218 127 aaKnown RBP11.21□□□□□ -0.61
RNF4-212ENST00000509258 IL9RQ01113 521 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 SULT2A1Q06520 285 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 PTP4A2Q12974 167 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 SLC12A1Q13621 1099 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 CST6Q15828 149 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 CCDC157Q569K6 752 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 FAM102AQ5T9C2 384 aaPredicted RBP11.21□□□□□ -0.61
RNF4-212ENST00000509258 NCEH1Q6PIU2 408 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 EMC1Q8N766 993 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 PDCD7Q8N8D1 485 aaKnown RBP11.21□□□□□ -0.61
RNF4-212ENST00000509258 TMEM35BQ8NCS4 154 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 SLC30A5Q8TAD4 765 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 HNRNPLLQ8WVV9 542 aaKnown RBP11.21□□□□□ -0.61
RNF4-212ENST00000509258 RNF34Q969K3 372 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 C18orf8Q96DM3 657 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 CFAP57Q96MR6 1250 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 RPRD1AQ96P16 312 aaPredicted RBP11.21□□□□□ -0.61
RNF4-212ENST00000509258 FEM1AQ9BSK4 669 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 TKTL2Q9H0I9 626 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 SYNCQ9H7C4 482 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 FAM207AQ9NSI2 230 aaPredicted RBP11.21□□□□□ -0.61
RNF4-212ENST00000509258 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.21□□□□□ -0.61
RNF4-212ENST00000509258 MPP6Q9NZW5 540 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 DACH1Q9UI36 760 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 FZD4Q9ULV1 537 aa11.21□□□□□ -0.61
RNF4-212ENST00000509258 KNTC1P50748 2209 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 A0A0D9SEW6 157 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 A0A1B0GTQ1 180 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 EDDM13A0A1B0GTR0 161 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 TRABD2BA6NFA1 517 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 E9PAM4 449 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 SMAD6O43541 496 aaKnown RBP11.2□□□□□ -0.62
RNF4-212ENST00000509258 RNASEH2AO75792 299 aaKnown RBP11.2□□□□□ -0.62
RNF4-212ENST00000509258 ADH1BP00325 375 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 CYP1A1P04798 512 aaPredicted RBP11.2□□□□□ -0.62
RNF4-212ENST00000509258 SLC2A3P11169 496 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 CDK4P11802 303 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 ZNF18P17022 549 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 ABCB4P21439 1286 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 SLC8A1P32418 973 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 HNF1BP35680 557 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 PPP2CBP62714 309 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 PPP2CAP67775 309 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 CAMK2BQ13554 666 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 SYCP1Q15431 976 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 C15orf59Q2T9L4 293 aaPredicted RBP11.2□□□□□ -0.62
RNF4-212ENST00000509258 POM121L1PQ3SYA9 428 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 TTC39BQ5VTQ0 682 aaPredicted RBP11.2□□□□□ -0.62
RNF4-212ENST00000509258 Q6ZVU0 165 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 SND1Q7KZF4 910 aaKnown RBP eCLIP11.2□□□□□ -0.62
RNF4-212ENST00000509258 TMPRSS12Q86WS5 348 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 ERICH1Q86X53 443 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 FAM131BQ86XD5 332 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 OXR1Q8N573 874 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 OR2T34Q8NGX1 318 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 JOSD2Q8TAC2 188 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 PGAP3Q96FM1 320 aaPredicted RBP11.2□□□□□ -0.62
RNF4-212ENST00000509258 SLC6A18Q96N87 628 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 NOX5Q96PH1 765 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 ELF4Q99607 663 aaPredicted RBP11.2□□□□□ -0.62
RNF4-212ENST00000509258 METTL5Q9NRN9 209 aaKnown RBP11.2□□□□□ -0.62
RNF4-212ENST00000509258 TMEM63CQ9P1W3 806 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 ADAMTS1Q9UHI8 967 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 TBC1D30Q9Y2I9 924 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 ACTL7AQ9Y615 435 aa11.2□□□□□ -0.62
RNF4-212ENST00000509258 URB1O60287 2271 aaKnown RBP11.19□□□□□ -0.62
RNF4-212ENST00000509258 A0A087WV48 116 aa11.19□□□□□ -0.62
RNF4-212ENST00000509258 FAM149AA5PLN7 773 aa11.19□□□□□ -0.62
RNF4-212ENST00000509258 ATP9BO43861 1147 aa11.19□□□□□ -0.62
RNF4-212ENST00000509258 MAGEC1O60732 1142 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms