RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 LCHNA4D1U4 455 aa16.91■□□□□ 0.3
DDX41-207ENST00000507900 ANXA9O76027 345 aa16.91■□□□□ 0.3
DDX41-207ENST00000507900 ALDH1A2O94788 518 aa16.91■□□□□ 0.3
DDX41-207ENST00000507900 HLA-DQB2P05538 268 aa16.91■□□□□ 0.3
DDX41-207ENST00000507900 PGAM1P18669 254 aa16.91■□□□□ 0.3
DDX41-207ENST00000507900 MGAT1P26572 445 aa16.91■□□□□ 0.3
DDX41-207ENST00000507900 MSH2P43246 934 aa16.91■□□□□ 0.3
DDX41-207ENST00000507900 NAPEPLDQ6IQ20 393 aa16.91■□□□□ 0.3
DDX41-207ENST00000507900 TMC7Q7Z402 723 aa16.91■□□□□ 0.3
DDX41-207ENST00000507900 LINC00523Q86TU6 105 aa16.91■□□□□ 0.3
DDX41-207ENST00000507900 TEX26Q8N6G2 289 aa16.91■□□□□ 0.3
DDX41-207ENST00000507900 MZB1Q8WU39 189 aa16.91■□□□□ 0.3
DDX41-207ENST00000507900 EMILIN2Q9BXX0 1053 aa16.91■□□□□ 0.3
DDX41-207ENST00000507900 LRRC3Q9BY71 257 aa16.91■□□□□ 0.3
DDX41-207ENST00000507900 MTIF3Q9H2K0 278 aaKnown RBP16.91■□□□□ 0.3
DDX41-207ENST00000507900 MOCS1Q9NZB8 636 aa16.91■□□□□ 0.3
DDX41-207ENST00000507900 ZNF180Q9UJW8 692 aa16.91■□□□□ 0.3
DDX41-207ENST00000507900 FAM159BA6NKW6 160 aa16.9■□□□□ 0.3
DDX41-207ENST00000507900 C1RP00736 705 aa16.9■□□□□ 0.3
DDX41-207ENST00000507900 CHN1P15882 459 aa16.9■□□□□ 0.3
DDX41-207ENST00000507900 OR1E1P30953 314 aa16.9■□□□□ 0.3
DDX41-207ENST00000507900 CORO1AP31146 461 aaKnown RBP16.9■□□□□ 0.3
DDX41-207ENST00000507900 CTNNB1P35222 781 aa16.9■□□□□ 0.3
DDX41-207ENST00000507900 RENBPP51606 427 aa16.9■□□□□ 0.3
DDX41-207ENST00000507900 SLC18A1P54219 525 aa16.9■□□□□ 0.3
DDX41-207ENST00000507900 CDH4P55283 916 aa16.9■□□□□ 0.3
DDX41-207ENST00000507900 UBE3AQ05086 875 aa16.9■□□□□ 0.3
DDX41-207ENST00000507900 IL10RBQ08334 325 aa16.9■□□□□ 0.3
DDX41-207ENST00000507900 SERINC3Q13530 473 aa16.9■□□□□ 0.3
DDX41-207ENST00000507900 SPARCL1Q14515 664 aa16.9■□□□□ 0.3
DDX41-207ENST00000507900 POLD3Q15054 466 aaPredicted RBP16.9■□□□□ 0.3
DDX41-207ENST00000507900 RABGAP1LQ5R372 815 aa16.9■□□□□ 0.3
DDX41-207ENST00000507900 TTC19Q6DKK2 380 aaPredicted RBP16.9■□□□□ 0.3
DDX41-207ENST00000507900 ZNF449Q6P9G9 518 aa16.9■□□□□ 0.3
DDX41-207ENST00000507900 CHST9Q7L1S5 443 aa16.9■□□□□ 0.3
DDX41-207ENST00000507900 RTL10Q7L3V2 364 aa16.9■□□□□ 0.3
DDX41-207ENST00000507900 OTOP3Q7RTS5 596 aa16.9■□□□□ 0.3
DDX41-207ENST00000507900 PRPF39Q86UA1 669 aaKnown RBP16.9■□□□□ 0.3
DDX41-207ENST00000507900 CIR1Q86X95 450 aaPredicted RBP16.9■□□□□ 0.3
DDX41-207ENST00000507900 TMC8Q8IU68 726 aa16.9■□□□□ 0.3
DDX41-207ENST00000507900 DENND1CQ8IV53 801 aa16.9■□□□□ 0.3
DDX41-207ENST00000507900 SRRM1Q8IYB3 904 aaKnown RBP16.9■□□□□ 0.3
DDX41-207ENST00000507900 OR52K1Q8NGK4 314 aa16.9■□□□□ 0.3
DDX41-207ENST00000507900 USP33Q8TEY7 942 aa16.9■□□□□ 0.3
DDX41-207ENST00000507900 PRICKLE1Q96MT3 831 aaPredicted RBP16.9■□□□□ 0.3
DDX41-207ENST00000507900 DDX50Q9BQ39 737 aaKnown RBP16.9■□□□□ 0.3
DDX41-207ENST00000507900 TCF25Q9BQ70 676 aa16.9■□□□□ 0.3
DDX41-207ENST00000507900 RBM22Q9NW64 420 aaKnown RBP eCLIP16.9■□□□□ 0.3
DDX41-207ENST00000507900 HELZP42694 1942 aaKnown RBP16.9■□□□□ 0.3
DDX41-207ENST00000507900 TMEM120BA0PK00 339 aa16.89■□□□□ 0.3
DDX41-207ENST00000507900 C5orf67F2Z3F1 127 aa16.89■□□□□ 0.3
DDX41-207ENST00000507900 H3BNC9 293 aa16.89■□□□□ 0.3
DDX41-207ENST00000507900 LRG1P02750 347 aa16.89■□□□□ 0.3
DDX41-207ENST00000507900 C8AP07357 584 aa16.89■□□□□ 0.3
DDX41-207ENST00000507900 BRAFP15056 766 aa16.89■□□□□ 0.3
DDX41-207ENST00000507900 CREB1P16220 341 aa16.89■□□□□ 0.3
DDX41-207ENST00000507900 NPY2RP49146 381 aa16.89■□□□□ 0.3
DDX41-207ENST00000507900 GEMP55040 296 aa16.89■□□□□ 0.3
DDX41-207ENST00000507900 SESN2P58004 480 aaPredicted RBP16.89■□□□□ 0.3
DDX41-207ENST00000507900 ERVFC1P60507 584 aa16.89■□□□□ 0.3
DDX41-207ENST00000507900 FRG1Q14331 258 aaKnown RBP16.89■□□□□ 0.3
DDX41-207ENST00000507900 ADGRF1Q5T601 910 aa16.89■□□□□ 0.3
DDX41-207ENST00000507900 TTC39BQ5VTQ0 682 aaPredicted RBP16.89■□□□□ 0.3
DDX41-207ENST00000507900 SLC26A11Q86WA9 606 aa16.89■□□□□ 0.3
DDX41-207ENST00000507900 LRRC6Q86X45 466 aa16.89■□□□□ 0.3
DDX41-207ENST00000507900 MRPL43Q8N983 215 aaKnown RBP16.89■□□□□ 0.3
DDX41-207ENST00000507900 KREMEN2Q8NCW0 462 aa16.89■□□□□ 0.3
DDX41-207ENST00000507900 MDM1Q8TC05 714 aa16.89■□□□□ 0.3
DDX41-207ENST00000507900 ATXN2LQ8WWM7 1075 aaKnown RBP16.89■□□□□ 0.3
DDX41-207ENST00000507900 TTC17Q96AE7 1141 aa16.89■□□□□ 0.3
DDX41-207ENST00000507900 MAGEH1Q9H213 219 aa16.89■□□□□ 0.3
DDX41-207ENST00000507900 SP110Q9HB58 689 aa16.89■□□□□ 0.3
DDX41-207ENST00000507900 SSU72Q9NP77 194 aaKnown RBP16.89■□□□□ 0.3
DDX41-207ENST00000507900 GKN1Q9NS71 199 aa16.89■□□□□ 0.3
DDX41-207ENST00000507900 SYBUQ9NX95 663 aa16.89■□□□□ 0.3
DDX41-207ENST00000507900 BFARQ9NZS9 450 aa16.89■□□□□ 0.3
DDX41-207ENST00000507900 AGO1Q9UL18 857 aaKnown RBP16.89■□□□□ 0.3
DDX41-207ENST00000507900 C2orf71A6NGG8 1288 aa16.89■□□□□ 0.29
DDX41-207ENST00000507900 J3KR12 359 aa16.89■□□□□ 0.29
DDX41-207ENST00000507900 PRPF4O43172 522 aaKnown RBP eCLIP16.89■□□□□ 0.29
DDX41-207ENST00000507900 CLDN11O75508 207 aa16.89■□□□□ 0.29
DDX41-207ENST00000507900 FAM155BO75949 473 aa16.89■□□□□ 0.29
DDX41-207ENST00000507900 GLUD1P00367 558 aa16.89■□□□□ 0.29
DDX41-207ENST00000507900 INHBAP08476 426 aa16.89■□□□□ 0.29
DDX41-207ENST00000507900 SPATA31D3P0C874 917 aa16.89■□□□□ 0.29
DDX41-207ENST00000507900 MBL2P11226 248 aaPredicted RBP16.89■□□□□ 0.29
DDX41-207ENST00000507900 PFKLP17858 780 aa16.89■□□□□ 0.29
DDX41-207ENST00000507900 KRT15P19012 456 aa16.89■□□□□ 0.29
DDX41-207ENST00000507900 CA8P35219 290 aa16.89■□□□□ 0.29
DDX41-207ENST00000507900 CRYMQ14894 314 aa16.89■□□□□ 0.29
DDX41-207ENST00000507900 RFWD3Q6PCD5 774 aa16.89■□□□□ 0.29
DDX41-207ENST00000507900 LEKR1Q6ZMV7 388 aa16.89■□□□□ 0.29
DDX41-207ENST00000507900 SPATA31D4Q6ZUB0 917 aa16.89■□□□□ 0.29
DDX41-207ENST00000507900 CCDC117Q8IWD4 279 aaPredicted RBP16.89■□□□□ 0.29
DDX41-207ENST00000507900 CNPY4Q8N129 248 aa16.89■□□□□ 0.29
DDX41-207ENST00000507900 SPPL3Q8TCT6 385 aa16.89■□□□□ 0.29
DDX41-207ENST00000507900 ZNF599Q96NL3 588 aa16.89■□□□□ 0.29
DDX41-207ENST00000507900 IL22Q9GZX6 179 aa16.89■□□□□ 0.29
DDX41-207ENST00000507900 SLC25A51Q9H1U9 297 aa16.89■□□□□ 0.29
DDX41-207ENST00000507900 EPN3Q9H201 632 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms