RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 TUBB4BP68371 445 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 GCNT1Q02742 428 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 SPA17Q15506 151 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 PTGISQ16647 500 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 TEX35Q5T0J7 233 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 PPP1R2P3Q6NXS1 205 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 TMCO3Q6UWJ1 677 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 RRAGAQ7L523 313 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 TEX9Q8N6V9 391 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 LMO3Q8TAP4 145 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 SUN5Q8TC36 379 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 SAAL1Q96ER3 474 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 TMEM41AQ96HV5 264 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 ANKRD36BP1Q96IX9 119 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 GPATCH1Q9BRR8 931 aaKnown RBP7.38□□□□□ -1.23
CLCN3-206ENST00000507875 SENP6Q9GZR1 1112 aaPredicted RBP7.38□□□□□ -1.23
CLCN3-206ENST00000507875 HAPLN2Q9GZV7 340 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 TMEM117Q9H0C3 514 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 BRD9Q9H8M2 597 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 SIX2Q9NPC8 291 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 UBN1Q9NPG3 1134 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 RASSF1Q9NS23 344 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 ARHGAP20Q9P2F6 1191 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 ANKFY1Q9P2R3 1169 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 GULP1Q9UBP9 304 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 TFR2Q9UP52 801 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 TMEM98Q9Y2Y6 226 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 A0A1W2PQ45 241 aaPredicted RBP7.37□□□□□ -1.23
CLCN3-206ENST00000507875 A0A1W2PQY0 241 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 LRRC53A6NM62 1247 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 MTRF1O75570 445 aaKnown RBP7.37□□□□□ -1.23
CLCN3-206ENST00000507875 NOL4O94818 638 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 LCA5LO95447 670 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 PLEKP08567 350 aaPredicted RBP7.37□□□□□ -1.23
CLCN3-206ENST00000507875 NFICP08651 508 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 UCHL3P15374 230 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 CYP3A5P20815 502 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 CDK7P50613 346 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 VAV2P52735 878 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 CYP27A1Q02318 531 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 PPP3CAQ08209 521 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 KIF5AQ12840 1032 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 BFSP2Q13515 415 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 SEMA3AQ14563 771 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 CCNG2Q16589 344 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 WHAMMP3Q1A5X7 153 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 CDPF1Q6NVV7 123 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 GALNT13Q8IUC8 556 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 BRSK1Q8TDC3 778 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 TSGA10Q9BZW7 698 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 FAM49AQ9H0Q0 323 aaPredicted RBP7.37□□□□□ -1.23
CLCN3-206ENST00000507875 EPC1Q9H2F5 836 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 GSX1Q9H4S2 264 aaPredicted RBP7.37□□□□□ -1.23
CLCN3-206ENST00000507875 MINDY3Q9H8M7 445 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 RAB20Q9NX57 234 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 FAM53CQ9NYF3 392 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 GOLGA8IPA6NC78 632 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 GOLGA8JA6NMD2 632 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 ZNF263O14978 683 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 CNOT4O95628 575 aaKnown RBP7.37□□□□□ -1.23
CLCN3-206ENST00000507875 EDN1P05305 212 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 GSNP06396 782 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 PAMP19021 973 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 TNNI1P19237 187 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 HADHAP40939 763 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 POLD2P49005 469 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 BPIFB4P59827 614 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 FMO1Q01740 532 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 SGSM1Q2NKQ1 1148 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 TRIM71Q2Q1W2 868 aaKnown RBP7.37□□□□□ -1.23
CLCN3-206ENST00000507875 WSCD2Q2TBF2 565 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 XKR4Q5GH76 650 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 EEF1DP3Q658K8 133 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 PGBD2Q6P3X8 592 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 SV2AQ7L0J3 742 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 TRAPPC11Q7Z392 1133 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 VPS36Q86VN1 386 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 LRRC43Q8N309 656 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 ANKRD52Q8NB46 1076 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 ARHGEF2Q92974 986 aaKnown RBP7.37□□□□□ -1.23
CLCN3-206ENST00000507875 ZBTB45Q96K62 511 aaPredicted RBP7.37□□□□□ -1.23
CLCN3-206ENST00000507875 PARD6BQ9BYG5 372 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 IMPG2Q9BZV3 1241 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 IKZF4Q9H2S9 585 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 HPS4Q9NQG7 708 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 CDY2AQ9Y6F7 541 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 TDRD15B5MCY1 1934 aaKnown RBP7.37□□□□□ -1.23
CLCN3-206ENST00000507875 TRIP11Q15643 1979 aa7.37□□□□□ -1.23
CLCN3-206ENST00000507875 FAM90A27PA6NNH2 459 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 TERTO14746 1132 aaKnown RBP7.36□□□□□ -1.23
CLCN3-206ENST00000507875 PLOD3O60568 738 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 RPS6KA5O75582 802 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 GUCA1CO95843 209 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 STAG3L1P0CL83 205 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 HNRNPLP14866 589 aaKnown RBP eCLIP7.36□□□□□ -1.23
CLCN3-206ENST00000507875 CCNCP24863 283 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 CD40P25942 277 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 CREMQ03060 361 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 LSAMPQ13449 338 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 GPR19Q15760 415 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms