RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 CIPCQ9C0C6 399 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 VPS51Q9UID3 782 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 VPS28Q9UK41 221 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 ERVW-1Q9UQF0 538 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 EFR3BQ9Y2G0 817 aa13.15□□□□□ -0.3
TCOF1-210ENST00000506767 NYNRINQ9P2P1 1898 aaKnown RBP13.14□□□□□ -0.31
TCOF1-210ENST00000506767 NUP205Q92621 2012 aa13.14□□□□□ -0.31
TCOF1-210ENST00000506767 hCG_1818297A0A087WSY0 165 aa13.14□□□□□ -0.31
TCOF1-210ENST00000506767 KDELR3O43731 214 aa13.14□□□□□ -0.31
TCOF1-210ENST00000506767 SNAP91O60641 907 aa13.14□□□□□ -0.31
TCOF1-210ENST00000506767 CD160O95971 181 aa13.14□□□□□ -0.31
TCOF1-210ENST00000506767 GLDCP23378 1020 aa13.14□□□□□ -0.31
TCOF1-210ENST00000506767 SERPINB6P35237 376 aa13.14□□□□□ -0.31
TCOF1-210ENST00000506767 ARF5P84085 180 aa13.14□□□□□ -0.31
TCOF1-210ENST00000506767 ECT2LQ008S8 904 aa13.14□□□□□ -0.31
TCOF1-210ENST00000506767 ADCY2Q08462 1091 aa13.14□□□□□ -0.31
TCOF1-210ENST00000506767 ZNF234Q14588 700 aa13.14□□□□□ -0.31
TCOF1-210ENST00000506767 DCAF12L1Q5VU92 463 aa13.14□□□□□ -0.31
TCOF1-210ENST00000506767 TP53INP2Q8IXH6 220 aa13.14□□□□□ -0.31
TCOF1-210ENST00000506767 CYB5D2Q8WUJ1 264 aa13.14□□□□□ -0.31
TCOF1-210ENST00000506767 HMCESQ96FZ2 354 aa13.14□□□□□ -0.31
TCOF1-210ENST00000506767 CELF6Q96J87 481 aaKnown RBP13.14□□□□□ -0.31
TCOF1-210ENST00000506767 GABRG3Q99928 467 aa13.14□□□□□ -0.31
TCOF1-210ENST00000506767 SPON2Q9BUD6 331 aa13.14□□□□□ -0.31
TCOF1-210ENST00000506767 TMEM245Q9H330 911 aa13.14□□□□□ -0.31
TCOF1-210ENST00000506767 ATP13A1Q9HD20 1204 aa13.14□□□□□ -0.31
TCOF1-210ENST00000506767 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.14□□□□□ -0.31
TCOF1-210ENST00000506767 PLA2G4CQ9UP65 541 aa13.14□□□□□ -0.31
TCOF1-210ENST00000506767 ARHGAP42A6NI28 874 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 WASH3PC4AMC7 463 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 CBX4O00257 560 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 MFSD11O43934 449 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 KIF5CO60282 957 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 ADAM23O75077 832 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 ATG13O75143 517 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 KRT10P13645 584 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 ZFXP17010 805 aaPredicted RBP13.13□□□□□ -0.31
TCOF1-210ENST00000506767 AVPR2P30518 371 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 NTSR1P30989 418 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 IL12RB1P42701 662 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 NUMBP49757 651 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 PAPOLAP51003 745 aaKnown RBP13.13□□□□□ -0.31
TCOF1-210ENST00000506767 SLC10A2Q12908 348 aaPredicted RBP13.13□□□□□ -0.31
TCOF1-210ENST00000506767 TFDP2Q14188 446 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 RPS6KA1Q15418 735 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 ZNF569Q5MCW4 686 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 IL31Q6EBC2 164 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 AADACL2Q6P093 401 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 TRMT11Q7Z4G4 463 aaKnown RBP13.13□□□□□ -0.31
TCOF1-210ENST00000506767 RFX6Q8HWS3 928 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 SLC35F6Q8N357 371 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 SPEM1Q8N4L4 309 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 ALLCQ8N6M5 410 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 TXNDC5Q8NBS9 432 aaKnown RBP13.13□□□□□ -0.31
TCOF1-210ENST00000506767 NETO2Q8NC67 525 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 RPL10LQ96L21 214 aaKnown RBP13.13□□□□□ -0.31
TCOF1-210ENST00000506767 HERPUD2Q9BSE4 406 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 MAK16Q9BXY0 300 aaKnown RBP13.13□□□□□ -0.31
TCOF1-210ENST00000506767 PDFQ9HBH1 243 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 CD248Q9HCU0 757 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 ZDHHC4Q9NPG8 344 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 SLCO3A1Q9UIG8 710 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 MMP17Q9ULZ9 603 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 HS3ST2Q9Y278 367 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 JRKLQ9Y4A0 524 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 STON1Q9Y6Q2 735 aa13.13□□□□□ -0.31
TCOF1-210ENST00000506767 ATG2BQ96BY7 2078 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 KMT2EQ8IZD2 1858 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 ZSCAN5CA6NGD5 496 aaPredicted RBP13.12□□□□□ -0.31
TCOF1-210ENST00000506767 SGK1O00141 431 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 APOL1O14791 398 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 ATP9BO43861 1147 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 CST8O60676 142 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 KLF8O95600 359 aaPredicted RBP13.12□□□□□ -0.31
TCOF1-210ENST00000506767 MT-CO1P00395 513 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 SRCP12931 536 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 STK19P49842 368 aaPredicted RBP13.12□□□□□ -0.31
TCOF1-210ENST00000506767 GBE1Q04446 702 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 SLC20A2Q08357 652 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 GALNT2Q10471 571 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 MTAPQ13126 283 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 ZNF211Q13398 564 aaPredicted RBP13.12□□□□□ -0.31
TCOF1-210ENST00000506767 RETSATQ6NUM9 610 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 ARHGAP36Q6ZRI8 547 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 BBS12Q6ZW61 710 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 SYT13Q7L8C5 426 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 LRRC49Q8IUZ0 686 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 CCDC50Q8IVM0 306 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 CHPFQ8IZ52 775 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 SH2D3CQ8N5H7 860 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 CCDC33Q8N5R6 958 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.12□□□□□ -0.31
TCOF1-210ENST00000506767 FRS2Q8WU20 508 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 OSBPL8Q9BZF1 889 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 CARD9Q9H257 536 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 C2orf42Q9NWW7 574 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 CACNA2D2Q9NY47 1150 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 DTLQ9NZJ0 730 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 SLC25A13Q9UJS0 675 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 HPCAL4Q9UM19 191 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms