RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 VRTNQ9H8Y1 702 aa12.93□□□□□ -0.34
LSM6-204ENST00000504181 CUEDC1Q9NWM3 386 aaPredicted RBP12.93□□□□□ -0.34
LSM6-204ENST00000504181 RABGEF1Q9UJ41 708 aa12.93□□□□□ -0.34
LSM6-204ENST00000504181 PADI4Q9UM07 663 aa12.93□□□□□ -0.34
LSM6-204ENST00000504181 CSMD2Q7Z408 3487 aa12.93□□□□□ -0.34
LSM6-204ENST00000504181 STX6O43752 255 aa12.92□□□□□ -0.34
LSM6-204ENST00000504181 IDEP14735 1019 aa12.92□□□□□ -0.34
LSM6-204ENST00000504181 JUNDP17535 347 aa12.92□□□□□ -0.34
LSM6-204ENST00000504181 SLC6A4P31645 630 aa12.92□□□□□ -0.34
LSM6-204ENST00000504181 NOS2P35228 1153 aa12.92□□□□□ -0.34
LSM6-204ENST00000504181 CCL7P80098 99 aa12.92□□□□□ -0.34
LSM6-204ENST00000504181 ECT2LQ008S8 904 aa12.92□□□□□ -0.34
LSM6-204ENST00000504181 CYP24A1Q07973 514 aa12.92□□□□□ -0.34
LSM6-204ENST00000504181 ZNF284Q2VY69 593 aa12.92□□□□□ -0.34
LSM6-204ENST00000504181 RILPL1Q5EBL4 403 aa12.92□□□□□ -0.34
LSM6-204ENST00000504181 FSCBQ5H9T9 825 aa12.92□□□□□ -0.34
LSM6-204ENST00000504181 MPP7Q5T2T1 576 aa12.92□□□□□ -0.34
LSM6-204ENST00000504181 ZC3H18Q86VM9 953 aaKnown RBP12.92□□□□□ -0.34
LSM6-204ENST00000504181 PARGQ86W56 976 aa12.92□□□□□ -0.34
LSM6-204ENST00000504181 HEATR4Q86WZ0 1026 aa12.92□□□□□ -0.34
LSM6-204ENST00000504181 ARHGAP18Q8N392 663 aa12.92□□□□□ -0.34
LSM6-204ENST00000504181 ZNF557Q8N988 423 aaPredicted RBP12.92□□□□□ -0.34
LSM6-204ENST00000504181 MS4A3Q96HJ5 214 aa12.92□□□□□ -0.34
LSM6-204ENST00000504181 TMEM74Q96NL1 305 aa12.92□□□□□ -0.34
LSM6-204ENST00000504181 SPAG5Q96R06 1193 aa12.92□□□□□ -0.34
LSM6-204ENST00000504181 TWNKQ96RR1 684 aa12.92□□□□□ -0.34
LSM6-204ENST00000504181 KIAA1586Q9HCI6 787 aa12.92□□□□□ -0.34
LSM6-204ENST00000504181 TP53TG5Q9Y2B4 290 aa12.92□□□□□ -0.34
LSM6-204ENST00000504181 HBS1LQ9Y450 684 aaKnown RBP12.92□□□□□ -0.34
LSM6-204ENST00000504181 AKAP9Q99996 3911 aa12.92□□□□□ -0.34
LSM6-204ENST00000504181 WIPF3A6NGB9 483 aa12.91□□□□□ -0.34
LSM6-204ENST00000504181 TPP1O14773 563 aa12.91□□□□□ -0.34
LSM6-204ENST00000504181 MSI1O43347 362 aaKnown RBP12.91□□□□□ -0.34
LSM6-204ENST00000504181 LATS1O95835 1130 aa12.91□□□□□ -0.34
LSM6-204ENST00000504181 RPLP0P05388 317 aaKnown RBP12.91□□□□□ -0.34
LSM6-204ENST00000504181 LIFP15018 202 aa12.91□□□□□ -0.34
LSM6-204ENST00000504181 CD82P27701 267 aa12.91□□□□□ -0.34
LSM6-204ENST00000504181 CCKBRP32239 447 aa12.91□□□□□ -0.34
LSM6-204ENST00000504181 C1orf61Q13536 156 aa12.91□□□□□ -0.34
LSM6-204ENST00000504181 CDH18Q13634 790 aa12.91□□□□□ -0.34
LSM6-204ENST00000504181 NUGGCQ68CJ6 796 aa12.91□□□□□ -0.34
LSM6-204ENST00000504181 UNC93AQ86WB7 457 aa12.91□□□□□ -0.34
LSM6-204ENST00000504181 DCP2Q8IU60 420 aaKnown RBP12.91□□□□□ -0.34
LSM6-204ENST00000504181 FAM114A1Q8IWE2 563 aa12.91□□□□□ -0.34
LSM6-204ENST00000504181 RBFAQ8N0V3 343 aa12.91□□□□□ -0.34
LSM6-204ENST00000504181 SDR16C5Q8N3Y7 309 aa12.91□□□□□ -0.34
LSM6-204ENST00000504181 OR8D1Q8WZ84 308 aa12.91□□□□□ -0.34
LSM6-204ENST00000504181 NDRG1Q92597 394 aaKnown RBP12.91□□□□□ -0.34
LSM6-204ENST00000504181 CCDC74AQ96AQ1 378 aa12.91□□□□□ -0.34
LSM6-204ENST00000504181 MOCOSQ96EN8 888 aa12.91□□□□□ -0.34
LSM6-204ENST00000504181 PRICKLE1Q96MT3 831 aaPredicted RBP12.91□□□□□ -0.34
LSM6-204ENST00000504181 CATSPER2Q96P56 530 aa12.91□□□□□ -0.34
LSM6-204ENST00000504181 DUSP16Q9BY84 665 aa12.91□□□□□ -0.34
LSM6-204ENST00000504181 CPEB1Q9BZB8 566 aaKnown RBP12.91□□□□□ -0.34
LSM6-204ENST00000504181 PCNX1Q96RV3 2341 aa12.91□□□□□ -0.34
LSM6-204ENST00000504181 SVILO95425 2214 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 ANKRD36A6QL64 1941 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 NAV3Q8IVL0 2385 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 SPTY2D1-AS1A0A0U1RR47 76 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 A0A1W2PQM1 296 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 POM121BA6NF01 834 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 STMND1H3BQB6 276 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 GCATO75600 419 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 MOCS3O95396 460 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 DDAH2O95865 285 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 TRIM21P19474 475 aaKnown RBP12.9□□□□□ -0.34
LSM6-204ENST00000504181 CASP4P49662 377 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 ATP1A2P50993 1020 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 CYP2J2P51589 502 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 ADKP55263 362 aaKnown RBP12.9□□□□□ -0.34
LSM6-204ENST00000504181 RPS24P62847 133 aaKnown RBP12.9□□□□□ -0.34
LSM6-204ENST00000504181 NCOA4Q13772 614 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 FGL2Q14314 439 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 FAM133BQ5BKY9 247 aaKnown RBP12.9□□□□□ -0.34
LSM6-204ENST00000504181 FAM46CQ5VWP2 391 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 MCTP1Q6DN14 999 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 SV2AQ7L0J3 742 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 TMPRSS9Q7Z410 1059 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 HORMAD1Q86X24 394 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 APCDD1Q8J025 514 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 EFCAB3Q8N7B9 438 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 TEX19Q8NA77 164 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 HJURPQ8NCD3 748 aaPredicted RBP12.9□□□□□ -0.34
LSM6-204ENST00000504181 GALNT11Q8NCW6 608 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 NKD1Q969G9 470 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 MYEOVQ96EZ4 313 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 BMFQ96LC9 184 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 TCEAL2Q9H3H9 227 aaPredicted RBP12.9□□□□□ -0.34
LSM6-204ENST00000504181 CASS4Q9NQ75 786 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 GPR27Q9NS67 375 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 OLA1Q9NTK5 396 aaKnown RBP12.9□□□□□ -0.34
LSM6-204ENST00000504181 GULP1Q9UBP9 304 aa12.9□□□□□ -0.34
LSM6-204ENST00000504181 IPO11Q9UI26 975 aaKnown RBP12.9□□□□□ -0.34
LSM6-204ENST00000504181 ZFR2Q9UPR6 939 aaKnown RBP12.9□□□□□ -0.34
LSM6-204ENST00000504181 ARHGEF17Q96PE2 2063 aaPredicted RBP12.9□□□□□ -0.34
LSM6-204ENST00000504181 TYW5A2RUC4 315 aaKnown RBP12.89□□□□□ -0.35
LSM6-204ENST00000504181 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.89□□□□□ -0.35
LSM6-204ENST00000504181 C1QTNF3-AMACRE9PGA6 284 aa12.89□□□□□ -0.35
LSM6-204ENST00000504181 CLIC2O15247 247 aa12.89□□□□□ -0.35
LSM6-204ENST00000504181 VNN1O95497 513 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms