RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 SMG5Q9UPR3 1016 aaKnown RBP22.45■■□□□ 1.19
PTPN13-205ENST00000502971 SLC4A7Q9Y6M7 1214 aa22.45■■□□□ 1.19
PTPN13-205ENST00000502971 GOLGA6L7A0A1B0GV03 622 aa22.45■■□□□ 1.18
PTPN13-205ENST00000502971 FAM159BA6NKW6 160 aa22.45■■□□□ 1.18
PTPN13-205ENST00000502971 PRPF4O43172 522 aaKnown RBP eCLIP22.45■■□□□ 1.18
PTPN13-205ENST00000502971 ALDH1A2O94788 518 aa22.45■■□□□ 1.18
PTPN13-205ENST00000502971 OAS1P00973 400 aaKnown RBP22.45■■□□□ 1.18
PTPN13-205ENST00000502971 YBEYP58557 167 aaPredicted RBP22.45■■□□□ 1.18
PTPN13-205ENST00000502971 HNRNPDQ14103 355 aaKnown RBP22.45■■□□□ 1.18
PTPN13-205ENST00000502971 ZSCAN26Q16670 478 aa22.45■■□□□ 1.18
PTPN13-205ENST00000502971 OTOP3Q7RTS5 596 aa22.45■■□□□ 1.18
PTPN13-205ENST00000502971 MZB1Q8WU39 189 aa22.45■■□□□ 1.18
PTPN13-205ENST00000502971 HMCESQ96FZ2 354 aa22.45■■□□□ 1.18
PTPN13-205ENST00000502971 RBM22Q9NW64 420 aaKnown RBP eCLIP22.45■■□□□ 1.18
PTPN13-205ENST00000502971 SYBUQ9NX95 663 aa22.45■■□□□ 1.18
PTPN13-205ENST00000502971 NKIRAS1Q9NYS0 192 aa22.45■■□□□ 1.18
PTPN13-205ENST00000502971 ASB3Q9Y575 518 aa22.45■■□□□ 1.18
PTPN13-205ENST00000502971 RAMP2O60895 175 aa22.44■■□□□ 1.18
PTPN13-205ENST00000502971 NPY2RP49146 381 aa22.44■■□□□ 1.18
PTPN13-205ENST00000502971 RENBPP51606 427 aa22.44■■□□□ 1.18
PTPN13-205ENST00000502971 CTAGE3PQ8IX95 158 aa22.44■■□□□ 1.18
PTPN13-205ENST00000502971 LGI2Q8N0V4 545 aa22.44■■□□□ 1.18
PTPN13-205ENST00000502971 PPM1NQ8N819 430 aa22.44■■□□□ 1.18
PTPN13-205ENST00000502971 DNAAF3Q8N9W5 541 aa22.44■■□□□ 1.18
PTPN13-205ENST00000502971 TTC17Q96AE7 1141 aa22.44■■□□□ 1.18
PTPN13-205ENST00000502971 OXNAD1Q96HP4 312 aaPredicted RBP22.44■■□□□ 1.18
PTPN13-205ENST00000502971 SAMD15Q9P1V8 674 aa22.44■■□□□ 1.18
PTPN13-205ENST00000502971 PCDH10Q9P2E7 1040 aa22.44■■□□□ 1.18
PTPN13-205ENST00000502971 NYNRINQ9P2P1 1898 aaKnown RBP22.44■■□□□ 1.18
PTPN13-205ENST00000502971 MAGEB16A2A368 324 aa22.43■■□□□ 1.18
PTPN13-205ENST00000502971 FAM47DPA6NHR8 397 aa22.43■■□□□ 1.18
PTPN13-205ENST00000502971 PIAS1O75925 651 aa22.43■■□□□ 1.18
PTPN13-205ENST00000502971 NEBLO76041 1014 aa22.43■■□□□ 1.18
PTPN13-205ENST00000502971 CNPP09543 421 aaKnown RBP22.43■■□□□ 1.18
PTPN13-205ENST00000502971 GEMP55040 296 aa22.43■■□□□ 1.18
PTPN13-205ENST00000502971 PABPC1LQ4VXU2 614 aaKnown RBP22.43■■□□□ 1.18
PTPN13-205ENST00000502971 FAM133BQ5BKY9 247 aaKnown RBP22.43■■□□□ 1.18
PTPN13-205ENST00000502971 LGSNQ5TDP6 509 aa22.43■■□□□ 1.18
PTPN13-205ENST00000502971 KLHL23Q8NBE8 558 aa22.43■■□□□ 1.18
PTPN13-205ENST00000502971 KLF16Q9BXK1 252 aaPredicted RBP22.43■■□□□ 1.18
PTPN13-205ENST00000502971 SP110Q9HB58 689 aa22.43■■□□□ 1.18
PTPN13-205ENST00000502971 CXXC1Q9P0U4 656 aaPredicted RBP22.43■■□□□ 1.18
PTPN13-205ENST00000502971 STC2O76061 302 aa22.43■■□□□ 1.18
PTPN13-205ENST00000502971 FAM107AO95990 144 aa22.43■■□□□ 1.18
PTPN13-205ENST00000502971 PEX11BO96011 259 aa22.43■■□□□ 1.18
PTPN13-205ENST00000502971 HLA-DQB2P05538 268 aa22.43■■□□□ 1.18
PTPN13-205ENST00000502971 OR1E1P30953 314 aa22.43■■□□□ 1.18
PTPN13-205ENST00000502971 GBP2P32456 591 aaPredicted RBP22.43■■□□□ 1.18
PTPN13-205ENST00000502971 SEC24CP53992 1094 aa22.43■■□□□ 1.18
PTPN13-205ENST00000502971 POLD3Q15054 466 aaPredicted RBP22.43■■□□□ 1.18
PTPN13-205ENST00000502971 SPANXN3Q5MJ09 141 aa22.43■■□□□ 1.18
PTPN13-205ENST00000502971 RABGAP1LQ5R372 815 aa22.43■■□□□ 1.18
PTPN13-205ENST00000502971 TTC39BQ5VTQ0 682 aaPredicted RBP22.43■■□□□ 1.18
PTPN13-205ENST00000502971 ZNF449Q6P9G9 518 aa22.43■■□□□ 1.18
PTPN13-205ENST00000502971 SP7Q8TDD2 431 aaPredicted RBP22.43■■□□□ 1.18
PTPN13-205ENST00000502971 NSMCE1Q8WV22 266 aa22.43■■□□□ 1.18
PTPN13-205ENST00000502971 ALKBH8Q96BT7 664 aaKnown RBP22.43■■□□□ 1.18
PTPN13-205ENST00000502971 SGSM3Q96HU1 749 aa22.43■■□□□ 1.18
PTPN13-205ENST00000502971 RAD9AQ99638 391 aa22.43■■□□□ 1.18
PTPN13-205ENST00000502971 RNF38Q9H0F5 515 aa22.43■■□□□ 1.18
PTPN13-205ENST00000502971 PIH1D1Q9NWS0 290 aaKnown RBP22.43■■□□□ 1.18
PTPN13-205ENST00000502971 A0A1W2PPM1 405 aa22.42■■□□□ 1.18
PTPN13-205ENST00000502971 CXorf49A8MYA2 514 aaPredicted RBP22.42■■□□□ 1.18
PTPN13-205ENST00000502971 NDUFAB1O14561 156 aa22.42■■□□□ 1.18
PTPN13-205ENST00000502971 TGM5O43548 720 aa22.42■■□□□ 1.18
PTPN13-205ENST00000502971 CXCL14O95715 111 aa22.42■■□□□ 1.18
PTPN13-205ENST00000502971 F11P03951 625 aa22.42■■□□□ 1.18
PTPN13-205ENST00000502971 POLBP06746 335 aa22.42■■□□□ 1.18
PTPN13-205ENST00000502971 SLC6A4P31645 630 aa22.42■■□□□ 1.18
PTPN13-205ENST00000502971 CA8P35219 290 aa22.42■■□□□ 1.18
PTPN13-205ENST00000502971 CRADDP78560 199 aa22.42■■□□□ 1.18
PTPN13-205ENST00000502971 TNK2Q07912 1038 aa22.42■■□□□ 1.18
PTPN13-205ENST00000502971 IL10RBQ08334 325 aa22.42■■□□□ 1.18
PTPN13-205ENST00000502971 CDH17Q12864 832 aa22.42■■□□□ 1.18
PTPN13-205ENST00000502971 NAB1Q13506 487 aa22.42■■□□□ 1.18
PTPN13-205ENST00000502971 MPP2Q14168 576 aa22.42■■□□□ 1.18
PTPN13-205ENST00000502971 TRMT10BQ6PF06 316 aaKnown RBP22.42■■□□□ 1.18
PTPN13-205ENST00000502971 TMEM150AQ86TG1 271 aa22.42■■□□□ 1.18
PTPN13-205ENST00000502971 DENND1CQ8IV53 801 aa22.42■■□□□ 1.18
PTPN13-205ENST00000502971 CNPY4Q8N129 248 aa22.42■■□□□ 1.18
PTPN13-205ENST00000502971 ANKRD42Q8N9B4 389 aa22.42■■□□□ 1.18
PTPN13-205ENST00000502971 MYEOVQ96EZ4 313 aa22.42■■□□□ 1.18
PTPN13-205ENST00000502971 ZNF419Q96HQ0 510 aaPredicted RBP22.42■■□□□ 1.18
PTPN13-205ENST00000502971 CCT8L2Q96SF2 557 aa22.42■■□□□ 1.18
PTPN13-205ENST00000502971 TRIM56Q9BRZ2 755 aaKnown RBP22.42■■□□□ 1.18
PTPN13-205ENST00000502971 SMYD2Q9NRG4 433 aa22.42■■□□□ 1.18
PTPN13-205ENST00000502971 C2orf78A6NCI8 922 aa22.41■■□□□ 1.18
PTPN13-205ENST00000502971 USP12O75317 370 aa22.41■■□□□ 1.18
PTPN13-205ENST00000502971 CORO1AP31146 461 aaKnown RBP22.41■■□□□ 1.18
PTPN13-205ENST00000502971 CDH4P55283 916 aa22.41■■□□□ 1.18
PTPN13-205ENST00000502971 OLIG2Q13516 323 aa22.41■■□□□ 1.18
PTPN13-205ENST00000502971 FRG1Q14331 258 aaKnown RBP22.41■■□□□ 1.18
PTPN13-205ENST00000502971 CRYMQ14894 314 aa22.41■■□□□ 1.18
PTPN13-205ENST00000502971 MARC1Q5VT66 337 aa22.41■■□□□ 1.18
PTPN13-205ENST00000502971 CIR1Q86X95 450 aaPredicted RBP22.41■■□□□ 1.18
PTPN13-205ENST00000502971 HERC6Q8IVU3 1022 aa22.41■■□□□ 1.18
PTPN13-205ENST00000502971 TEX26Q8N6G2 289 aa22.41■■□□□ 1.18
PTPN13-205ENST00000502971 DYDC1Q8WWB3 177 aa22.41■■□□□ 1.18
PTPN13-205ENST00000502971 CDKL2Q92772 493 aa22.41■■□□□ 1.18
PTPN13-205ENST00000502971 DDX50Q9BQ39 737 aaKnown RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms