RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 MIS12Q9H081 205 aa5.35□□□□□ -1.55
HTT-202ENST00000502820 ZHX3Q9H4I2 956 aa5.35□□□□□ -1.55
HTT-202ENST00000502820 C6orf106Q9H6K1 298 aaPredicted RBP5.35□□□□□ -1.55
HTT-202ENST00000502820 NHEJ1Q9H9Q4 299 aaPredicted RBP5.35□□□□□ -1.55
HTT-202ENST00000502820 SLC24A3Q9HC58 644 aa5.35□□□□□ -1.55
HTT-202ENST00000502820 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.35□□□□□ -1.55
HTT-202ENST00000502820 THSD1Q9NS62 852 aa5.35□□□□□ -1.55
HTT-202ENST00000502820 TXLNGQ9NUQ3 528 aa5.35□□□□□ -1.55
HTT-202ENST00000502820 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.35□□□□□ -1.55
HTT-202ENST00000502820 DDX43Q9NXZ2 648 aaKnown RBP5.35□□□□□ -1.55
HTT-202ENST00000502820 PLK2Q9NYY3 685 aa5.35□□□□□ -1.55
HTT-202ENST00000502820 IL1RAPL1Q9NZN1 696 aa5.35□□□□□ -1.55
HTT-202ENST00000502820 GCNT4Q9P109 453 aa5.35□□□□□ -1.55
HTT-202ENST00000502820 HSFX1Q9UBD0 423 aa5.35□□□□□ -1.55
HTT-202ENST00000502820 SERTAD1Q9UHV2 236 aa5.35□□□□□ -1.55
HTT-202ENST00000502820 AGO2Q9UKV8 859 aaKnown RBP5.35□□□□□ -1.55
HTT-202ENST00000502820 REXO2Q9Y3B8 237 aaKnown RBP5.35□□□□□ -1.55
HTT-202ENST00000502820 DAAM1Q9Y4D1 1078 aa5.35□□□□□ -1.55
HTT-202ENST00000502820 PCDHGA1Q9Y5H4 931 aa5.35□□□□□ -1.55
HTT-202ENST00000502820 STON1Q9Y6Q2 735 aa5.35□□□□□ -1.55
HTT-202ENST00000502820 MYO18BQ8IUG5 2567 aa5.35□□□□□ -1.55
HTT-202ENST00000502820 COL5A1P20908 1838 aaPredicted RBP5.34□□□□□ -1.55
HTT-202ENST00000502820 PIEZO2Q9H5I5 2752 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 SPAG17Q6Q759 2223 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 PTPRJQ12913 1337 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 PRRT4C9JH25 899 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 K7ENP7 123 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 HCRTO43612 131 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 CREB3O43889 395 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 PCDHGA12O60330 932 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 NOL4O94818 638 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 SUN1O94901 812 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 IL18RAPO95256 599 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 GCNT3O95395 438 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 AGTP01019 485 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 EPHX1P07099 455 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 CDK4P11802 303 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 NQO1P15559 274 aaKnown RBP5.34□□□□□ -1.55
HTT-202ENST00000502820 ATP6V1C1P21283 382 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 DRD4P21917 467 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 BDNFP23560 247 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 ACSL1P33121 698 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 CTNNA1P35221 906 aaKnown RBP5.34□□□□□ -1.55
HTT-202ENST00000502820 HOXD13P35453 343 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 EIF2DP41214 584 aaKnown RBP5.34□□□□□ -1.55
HTT-202ENST00000502820 AFMP43652 599 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 TAF6P49848 677 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 CDH8P55286 799 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 RIPPLY3P57055 190 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 INSM1Q01101 510 aaPredicted RBP5.34□□□□□ -1.55
HTT-202ENST00000502820 GUCY1A3Q02108 690 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 KLC1Q07866 573 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 C2orf54Q08AI8 447 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 SMARCB1Q12824 385 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 BNIP3Q12983 259 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 NFE2Q16621 373 aaPredicted RBP5.34□□□□□ -1.55
HTT-202ENST00000502820 SKIDA1Q1XH10 827 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 VWA3BQ502W6 1294 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 INO80CQ6PI98 192 aaPredicted RBP5.34□□□□□ -1.55
HTT-202ENST00000502820 UNC13DQ70J99 1090 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 EPM2AIP1Q7L775 607 aaPredicted RBP5.34□□□□□ -1.55
HTT-202ENST00000502820 HS2ST1Q7LGA3 356 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 TRPM8Q7Z2W7 1104 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 PIGWQ7Z7B1 504 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 LCA5Q86VQ0 697 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 NT5DC4Q86YG4 428 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 BBS7Q8IWZ6 715 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 ALDH16A1Q8IZ83 802 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 LSMEM2Q8N112 164 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 AGGF1Q8N302 714 aaeCLIP5.34□□□□□ -1.55
HTT-202ENST00000502820 ZSWIM2Q8NEG5 633 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 SPDYE1Q8NFV5 336 aaPredicted RBP5.34□□□□□ -1.55
HTT-202ENST00000502820 CXorf38Q8TB03 319 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 ACTRT1Q8TDG2 376 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 POMGNT1Q8WZA1 660 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 TAF4BQ92750 862 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 INPP5DQ92835 1189 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 SKA1Q96BD8 255 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 BIRC7Q96CA5 298 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 TLCD1Q96CP7 247 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 PAGE5Q96GU1 130 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 SLC6A18Q96N87 628 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 TMEM237Q96Q45 408 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 ACCSQ96QU6 501 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 ELF4Q99607 663 aaPredicted RBP5.34□□□□□ -1.55
HTT-202ENST00000502820 CBWD1Q9BRT8 395 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 LRRC1Q9BTT6 524 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 DPH1Q9BZG8 443 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 CIPCQ9C0C6 399 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 MKRN2Q9H000 416 aaKnown RBP5.34□□□□□ -1.55
HTT-202ENST00000502820 SYNDIG1Q9H7V2 258 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 DMAP1Q9NPF5 467 aaPredicted RBP5.34□□□□□ -1.55
HTT-202ENST00000502820 ITM2CQ9NQX7 267 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 SPHK2Q9NRA0 654 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 PANK4Q9NVE7 773 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 HSPBP1Q9NZL4 362 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 AIPL1Q9NZN9 384 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 NDUFA13Q9P0J0 144 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 PDP2Q9P2J9 529 aa5.34□□□□□ -1.55
HTT-202ENST00000502820 TBC1D14Q9P2M4 693 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms