RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 C1orf146Q5VVC0 180 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 PDPK2PQ6A1A2 396 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 ITPRIPL1Q6GPH6 555 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 MYLK4Q86YV6 388 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-204ENST00000501271 LMNTD2Q8IXW0 634 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 URGCPQ8TCY9 931 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 TEKT5Q96M29 485 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 EPAS1Q99814 870 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 AP5M1Q9H0R1 490 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 IARS2Q9NSE4 1012 aaKnown RBP10.05□□□□□ -0.8
CLIP1-204ENST00000501271 C20orf96Q9NUD7 363 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-204ENST00000501271 DONSONQ9NYP3 566 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 ZNF212Q9UDV6 495 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 TRHDEQ9UKU6 1024 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 CDH9Q9ULB4 789 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 CORO1CQ9ULV4 474 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-204ENST00000501271 ST3GAL5Q9UNP4 418 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 PCDHB12Q9Y5F1 795 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 BRCA2P51587 3418 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 ARL5CA6NH57 179 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 A6NHS1 94 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-204ENST00000501271 MTSS1O43312 755 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 ZNF189O75820 626 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-204ENST00000501271 UPP2O95045 317 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 KLHL2O95198 593 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 MPOP05164 745 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 CTSHP09668 335 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 SERPINB6P35237 376 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 TUBP50607 506 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 CDK7P50613 346 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 COPAP53621 1224 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 PEX6Q13608 980 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 PAN2Q504Q3 1202 aaKnown RBP10.05□□□□□ -0.8
CLIP1-204ENST00000501271 TIGD5Q53EQ6 642 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 ARHGAP36Q6ZRI8 547 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 OTOP3Q7RTS5 596 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 PHTF2Q8N3S3 785 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 CNTD1Q8N815 330 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 USP33Q8TEY7 942 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 UCMAQ8WVF2 138 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 MOCOSQ96EN8 888 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 ZNF419Q96HQ0 510 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-204ENST00000501271 VPS39Q96JC1 886 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 IL22Q9GZX6 179 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 BRD8Q9H0E9 1235 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 CSNK1G1Q9HCP0 422 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 NEU3Q9UQ49 428 aa10.05□□□□□ -0.8
CLIP1-204ENST00000501271 SCN10AQ9Y5Y9 1956 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 SORBS2O94875 1100 aaKnown RBP10.04□□□□□ -0.8
CLIP1-204ENST00000501271 F9P00740 461 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 GNAT1P11488 350 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 ANPEPP15144 967 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 YY1P25490 414 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 ITGA7Q13683 1181 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 PM20D1Q6GTS8 502 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 CAPRIN2Q6IMN6 1127 aaKnown RBP10.04□□□□□ -0.8
CLIP1-204ENST00000501271 TAF2Q6P1X5 1199 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 AGMOQ6ZNB7 445 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 AGR3Q8TD06 166 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 MAPK15Q8TD08 544 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 SPDL1Q96EA4 605 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 VAT1Q99536 393 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 CDH19Q9H159 772 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 FAM96AQ9H5X1 160 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 COG4Q9H9E3 785 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 NMRAL1Q9HBL8 299 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 ACSS2Q9NR19 701 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 MAN1C1Q9NR34 630 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 RRN3Q9NYV6 651 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 CPSF2Q9P2I0 782 aaKnown RBP10.04□□□□□ -0.8
CLIP1-204ENST00000501271 PPM1HQ9ULR3 514 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 LRCH1Q9Y2L9 728 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 TTC3P53804 2025 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 MYO16Q9Y6X6 1858 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 TK2O00142 265 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 TIMM44O43615 452 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 ZBTB14O43829 449 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 HSPA4LO95757 839 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 NCF2P19878 526 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-204ENST00000501271 BDNFP23560 247 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 NPY2RP49146 381 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 CSRP3P50461 194 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 CSE1LP55060 971 aaKnown RBP10.04□□□□□ -0.8
CLIP1-204ENST00000501271 KLC1Q07866 573 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 CDH17Q12864 832 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 PPP2R5DQ14738 602 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 GRM3Q14832 879 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 UPP1Q16831 310 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 SLC9B1Q4ZJI4 515 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 C6orf163Q5TEZ5 329 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 EPGNQ6UW88 154 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 SPATA22Q8NHS9 363 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 DQX1Q8TE96 717 aaKnown RBP10.04□□□□□ -0.8
CLIP1-204ENST00000501271 TMLHEQ9NVH6 421 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 ANGPTL2Q9UKU9 493 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 SLC39A10Q9ULF5 831 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 TRPV2Q9Y5S1 764 aa10.04□□□□□ -0.8
CLIP1-204ENST00000501271 MRPL42Q9Y6G3 142 aaKnown RBP10.04□□□□□ -0.8
CLIP1-204ENST00000501271 MAGEB16A2A368 324 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms