RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 PTK2Q05397 1052 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 BNIP3Q12983 259 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 NME3Q13232 169 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 ILKQ13418 452 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 AUHQ13825 339 aaKnown RBP12.37□□□□□ -0.43
CNOT4-211ENST00000498534 SETMARQ53H47 684 aaPredicted RBP12.37□□□□□ -0.43
CNOT4-211ENST00000498534 OR6B2Q6IFH4 312 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 GBP6Q6ZN66 633 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 C11orf57Q6ZUT1 292 aaPredicted RBP12.37□□□□□ -0.43
CNOT4-211ENST00000498534 NXPE2Q96DL1 559 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 SLC2A13Q96QE2 648 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 SIK2Q9H0K1 926 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 SYNCQ9H7C4 482 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 ACP6Q9NPH0 428 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 ARHGAP20Q9P2F6 1191 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 VPS28Q9UK41 221 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 VANGL2Q9ULK5 521 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 PPM1HQ9ULR3 514 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 CBX4O00257 560 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 PLRG1O43660 514 aaKnown RBP12.36□□□□□ -0.43
CNOT4-211ENST00000498534 BNIP3LO60238 219 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 RNGTTO60942 597 aaKnown RBP12.36□□□□□ -0.43
CNOT4-211ENST00000498534 GRAP2O75791 330 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 CKMT2P17540 419 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 SLC9A1P19634 815 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 NOS2P35228 1153 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 EMP3P54852 163 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 PPP2CBP62714 309 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 PPP2CAP67775 309 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 KRT83P78385 493 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 CNTN1Q12860 1018 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 TARDBPQ13148 414 aaKnown RBP eCLIP12.36□□□□□ -0.438e-8■■■■□ 26.5
CNOT4-211ENST00000498534 HS1BP3Q53T59 392 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 SMYD5Q6GMV2 418 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 CXorf57Q6NSI4 855 aaKnown RBP12.36□□□□□ -0.43
CNOT4-211ENST00000498534 GJB7Q6PEY0 223 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 TRIM65Q6PJ69 517 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 LRRC69Q6ZNQ3 347 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 TRIM69Q86WT6 500 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 WDTC1Q8N5D0 677 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 PIP4K2CQ8TBX8 421 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 TSC1Q92574 1164 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 ALG14Q96F25 216 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 KLHDC7BQ96G42 594 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 CCDC114Q96M63 670 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 CPXM1Q96SM3 734 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 MUC3BQ9H195 1237 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 WDCPQ9H6R7 721 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 RRN3Q9NYV6 651 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 APEX2Q9UBZ4 518 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 SARDHQ9UL12 918 aa12.36□□□□□ -0.43
CNOT4-211ENST00000498534 COL5A1P20908 1838 aaPredicted RBP12.36□□□□□ -0.43
CNOT4-211ENST00000498534 M0QYT0 321 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 RRP8O43159 456 aaKnown RBP12.35□□□□□ -0.43
CNOT4-211ENST00000498534 PAGE1O75459 146 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 ABCG1P45844 678 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 ACADVLP49748 655 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 CDH4P55283 916 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 E2F1Q01094 437 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 SLC6A3Q01959 620 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 SEMG2Q02383 582 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 EXOC3L4Q17RC7 722 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 POM121L1PQ3SYA9 428 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 HES3Q5TGS1 186 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 NEK5Q6P3R8 708 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 Q6ZVU0 165 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 SPATS2Q86XZ4 545 aaKnown RBP12.35□□□□□ -0.43
CNOT4-211ENST00000498534 PASD1Q8IV76 773 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 SH2D3CQ8N5H7 860 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 ATP11CQ8NB49 1132 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 FAM131CQ96AQ9 280 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 C2orf49Q9BVC5 232 aaPredicted RBP12.35□□□□□ -0.43
CNOT4-211ENST00000498534 NRSN2Q9GZP1 204 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 PREBQ9HCU5 417 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 DYRK4Q9NR20 520 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 TMEM51Q9NW97 253 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 RWDD2AQ9UIY3 292 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 PCDHGC3Q9UN70 934 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 TBC1D30Q9Y2I9 924 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 PAXBP1Q9Y5B6 917 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 OR51B4Q9Y5P0 310 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 HS3ST4Q9Y661 456 aa12.35□□□□□ -0.43
CNOT4-211ENST00000498534 BECN2A8MW95 431 aa12.34□□□□□ -0.43
CNOT4-211ENST00000498534 F9P00740 461 aa12.34□□□□□ -0.43
CNOT4-211ENST00000498534 METAP1P53582 386 aa12.34□□□□□ -0.43
CNOT4-211ENST00000498534 BPIFB4P59827 614 aa12.34□□□□□ -0.43
CNOT4-211ENST00000498534 RNASE9P60153 205 aaKnown RBP12.34□□□□□ -0.43
CNOT4-211ENST00000498534 CENPCQ03188 943 aa12.34□□□□□ -0.43
CNOT4-211ENST00000498534 RTP5Q14D33 572 aa12.34□□□□□ -0.43
CNOT4-211ENST00000498534 ACBD5Q5T8D3 534 aaPredicted RBP12.34□□□□□ -0.43
CNOT4-211ENST00000498534 AGBL4Q5VU57 503 aa12.34□□□□□ -0.43
CNOT4-211ENST00000498534 SFMBT2Q5VUG0 894 aa12.34□□□□□ -0.43
CNOT4-211ENST00000498534 FBXL19Q6PCT2 694 aa12.34□□□□□ -0.43
CNOT4-211ENST00000498534 LRRC31Q6UY01 552 aa12.34□□□□□ -0.43
CNOT4-211ENST00000498534 FAM183BPQ6ZVS7 135 aa12.34□□□□□ -0.43
CNOT4-211ENST00000498534 ZDHHC17Q8IUH5 632 aa12.34□□□□□ -0.43
CNOT4-211ENST00000498534 CACTIN-AS1Q8N1I8 211 aa12.34□□□□□ -0.43
CNOT4-211ENST00000498534 SHC3Q92529 594 aa12.34□□□□□ -0.43
CNOT4-211ENST00000498534 BAP1Q92560 729 aa12.34□□□□□ -0.43
CNOT4-211ENST00000498534 PDCL3Q9H2J4 239 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms