RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 HAPLN3Q96S86 360 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 PSMB7Q99436 277 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 C2orf49Q9BVC5 232 aaPredicted RBP8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 NAT10Q9H0A0 1025 aaKnown RBP8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 HSD3B7Q9H2F3 369 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 IL21RQ9HBE5 538 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 TM9SF3Q9HD45 589 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 MPP6Q9NZW5 540 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 SLCO1B1Q9Y6L6 691 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 CNOT1A5YKK6 2376 aaKnown RBP8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 SPTBN2O15020 2390 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 A0A1W2PPC4 97 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 C1QTNF3-AMACRE9PGA6 284 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 ALOX15BO15296 676 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 BNIP3LO60238 219 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 SNAP91O60641 907 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 ENDOD1O94919 500 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 ZNF883P0CG24 379 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 SRCP12931 536 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 ATP1A3P13637 1013 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 SDC4P31431 198 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 DRD3P35462 400 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 METAP1P53582 386 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 ADPRHP54922 357 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 GSCP56915 257 aaPredicted RBP8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 RACK1P63244 317 aaKnown RBP8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 SIM1P81133 766 aaPredicted RBP8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 PTP4A2Q12974 167 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 CLEC16AQ2KHT3 1053 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 C15orf59Q2T9L4 293 aaPredicted RBP8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 HLA-BQ31612 363 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 ARL13BQ3SXY8 428 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 CCDC14Q49A88 953 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 ANO6Q4KMQ2 910 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 C6orf118Q5T5N4 469 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 FAM46CQ5VWP2 391 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 LAYNQ6UX15 382 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 Q6ZVU0 165 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 APTXQ7Z2E3 356 aaKnown RBP8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 TFAP2DQ7Z6R9 452 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 PHLDB2Q86SQ0 1253 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 DCAF4L2Q8NA75 395 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 ATP11CQ8NB49 1132 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 OR14C36Q8NHC7 312 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 JOSD2Q8TAC2 188 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 RXFP2Q8WXD0 754 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 CCDC114Q96M63 670 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 CAMK1GQ96NX5 476 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 PCDHB18PQ96TA0 734 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 ORAI3Q9BRQ5 295 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 SELENOOQ9BVL4 669 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 ZYG11BQ9C0D3 744 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 TM7SF3Q9NS93 570 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 SEPT11Q9NVA2 429 aaKnown RBP8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 ADAM22Q9P0K1 906 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 PPARGC1AQ9UBK2 798 aaKnown RBP8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 VPS51Q9UID3 782 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 TPX2Q9ULW0 747 aaKnown RBP8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 HS3ST2Q9Y278 367 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 ANKRD6Q9Y2G4 727 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 FNDC3AQ9Y2H6 1198 aaKnown RBP8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 PCDHB9Q9Y5E1 797 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 SNX11Q9Y5W9 270 aa8.69□□□□□ -1.02
HMGXB4-207ENST00000498212 COL5A1P20908 1838 aaPredicted RBP8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 ANKRD36A6QL64 1941 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 TBC1D3DA0A087WVF3 549 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 TBC1D3IA0A087WXS9 549 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 TBC1D3EA0A087X179 549 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 TBC1D3KA0A087X1G2 549 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 A0A0D9SEW6 157 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 ILVBLA1L0T0 632 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 TBC1D3FA6NER0 549 aaPredicted RBP8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 C2CD4BA6NLJ0 364 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 SMTNL1A8MU46 457 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 TBC1D3LB9A6J9 549 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 MCF2LO15068 1137 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 SLC7A4O43246 635 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 GJB6O95452 261 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 TOP3BO95985 862 aaKnown RBP8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 MT-CO1P00395 513 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 CALB1P05937 261 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 CCDC172P0C7W6 258 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 TBC1D3HP0C7X1 549 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 KRT3P12035 628 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 HOXB3P14651 431 aaPredicted RBP8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 SPINK2P20155 84 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 ADRA1BP35368 520 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 PTPN9P43378 593 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 CCR5P51681 352 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 FAM193AP78312 1265 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 TRIP6Q15654 476 aaKnown RBP8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 KIF19Q2TAC6 998 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 RAB6CQ53S08 254 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 ARTNQ5T4W7 220 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 TBC1D3GQ6DHY5 549 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 TBC1D3CQ6IPX1 549 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 CAVIN1Q6NZI2 390 aaKnown RBP8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 LINGO4Q6UY18 593 aa8.68□□□□□ -1.02
HMGXB4-207ENST00000498212 ZNF783Q6ZMS7 281 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms