RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 PCDHA6Q9UN73 950 aa4.94□□□□□ -1.62
XPA-204ENST00000496104 GPR52Q9Y2T5 361 aa4.94□□□□□ -1.62
XPA-204ENST00000496104 ZNF451Q9Y4E5 1061 aa4.94□□□□□ -1.62
XPA-204ENST00000496104 PCDHA8Q9Y5H6 950 aa4.94□□□□□ -1.62
XPA-204ENST00000496104 ZNF638Q14966 1978 aaKnown RBP4.94□□□□□ -1.62
XPA-204ENST00000496104 VPS13CQ709C8 3753 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 ANAPC1Q9H1A4 1944 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 A0A1B0GTQ1 180 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 MEGF11A6BM72 1044 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 KLHL33A6NCF5 533 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 WDR64B1ANS9 1081 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 TOR1BO14657 336 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 AREL1O15033 823 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 PRODHO43272 600 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 EDIL3O43854 480 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 USP12O75317 370 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 CST3P01034 146 aaPredicted RBP4.93□□□□□ -1.62
XPA-204ENST00000496104 WNT1P04628 370 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 TP53P04637 393 aaPredicted RBP4.93□□□□□ -1.62
XPA-204ENST00000496104 TPM2P07951 284 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 ZFYP08048 801 aaPredicted RBP4.93□□□□□ -1.62
XPA-204ENST00000496104 RAC2P15153 192 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 GNSP15586 552 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 ARF4P18085 180 aaPredicted RBP4.93□□□□□ -1.62
XPA-204ENST00000496104 ATF6P18850 670 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 KRT20P35900 424 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 CLCNKBP51801 687 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 ELAVL2Q12926 359 aaKnown RBP4.93□□□□□ -1.62
XPA-204ENST00000496104 BYSLQ13895 437 aaKnown RBP4.93□□□□□ -1.62
XPA-204ENST00000496104 MTF1Q14872 753 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 PDGFRLQ15198 375 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 PTPAQ15257 358 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 PCBP2Q15366 365 aaKnown RBP eCLIP4.93□□□□□ -1.62
XPA-204ENST00000496104 NTRK3Q16288 839 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 UPP1Q16831 310 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 FKBP15Q5T1M5 1219 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 ZNF648Q5T619 568 aaPredicted RBP4.93□□□□□ -1.62
XPA-204ENST00000496104 FHL5Q5TD97 284 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 DCAF12L1Q5VU92 463 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 SFMBT2Q5VUG0 894 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 ISM2Q6H9L7 571 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 IL27RAQ6UWB1 636 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 TMCO3Q6UWJ1 677 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 DNAJB7Q7Z6W7 309 aaPredicted RBP4.93□□□□□ -1.62
XPA-204ENST00000496104 ZNF589Q86UQ0 364 aaPredicted RBP4.93□□□□□ -1.62
XPA-204ENST00000496104 SKAP1Q86WV1 359 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 EFCAB13Q8IY85 973 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 ARHGEF39Q8N4T4 335 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 OR2C3Q8N628 320 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 TEX9Q8N6V9 391 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 CNNM3Q8NE01 707 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 ZNF507Q8TCN5 953 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 PDCD6IPQ8WUM4 868 aaKnown RBP4.93□□□□□ -1.62
XPA-204ENST00000496104 PIBF1Q8WXW3 757 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 LENG9Q96B70 501 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 MOCOSQ96EN8 888 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 P2RY11Q96G91 374 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 RCC1LQ96I51 464 aaKnown RBP4.93□□□□□ -1.62
XPA-204ENST00000496104 MRGPRX1Q96LB2 322 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 SLC46A1Q96NT5 459 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 FANCD2OSQ96PS1 177 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 PPP1R10Q96QC0 940 aaKnown RBP4.93□□□□□ -1.62
XPA-204ENST00000496104 TREX2Q9BQ50 279 aaPredicted RBP4.93□□□□□ -1.62
XPA-204ENST00000496104 VPS11Q9H270 941 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 TMEM245Q9H330 911 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 PLEKHA5Q9HAU0 1116 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 THG1LQ9NWX6 298 aaKnown RBP4.93□□□□□ -1.62
XPA-204ENST00000496104 USP36Q9P275 1121 aaKnown RBP4.93□□□□□ -1.62
XPA-204ENST00000496104 CCDC39Q9UFE4 941 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 ERRFI1Q9UJM3 462 aaPredicted RBP4.93□□□□□ -1.62
XPA-204ENST00000496104 ANAPC2Q9UJX6 822 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 SLC13A4Q9UKG4 626 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 PADI4Q9UM07 663 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 DNM3Q9UQ16 869 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 CRYL1Q9Y2S2 319 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 SNX5Q9Y5X3 404 aa4.93□□□□□ -1.62
XPA-204ENST00000496104 KMT2CQ8NEZ4 4911 aaKnown RBP4.93□□□□□ -1.62
XPA-204ENST00000496104 LRRC10BA6NIK2 292 aa4.92□□□□□ -1.62
XPA-204ENST00000496104 F5H0A9 414 aaPredicted RBP4.92□□□□□ -1.62
XPA-204ENST00000496104 CPLX1O14810 134 aa4.92□□□□□ -1.62
XPA-204ENST00000496104 XPOTO43592 962 aaKnown RBP4.92□□□□□ -1.62
XPA-204ENST00000496104 DLX3O60479 287 aa4.92□□□□□ -1.62
XPA-204ENST00000496104 B3GAT3O94766 335 aa4.92□□□□□ -1.62
XPA-204ENST00000496104 GFPT2O94808 682 aa4.92□□□□□ -1.62
XPA-204ENST00000496104 LDOC1O95751 146 aaPredicted RBP4.92□□□□□ -1.62
XPA-204ENST00000496104 CYP17A1P05093 508 aa4.92□□□□□ -1.62
XPA-204ENST00000496104 EDN1P05305 212 aa4.92□□□□□ -1.62
XPA-204ENST00000496104 SFTPCP11686 197 aa4.92□□□□□ -1.62
XPA-204ENST00000496104 CDK4P11802 303 aa4.92□□□□□ -1.62
XPA-204ENST00000496104 RARGP13631 454 aa4.92□□□□□ -1.62
XPA-204ENST00000496104 FOSL1P15407 271 aa4.92□□□□□ -1.62
XPA-204ENST00000496104 SMARCA1P28370 1054 aa4.92□□□□□ -1.62
XPA-204ENST00000496104 KIF5BP33176 963 aa4.92□□□□□ -1.62
XPA-204ENST00000496104 TNFSF9P41273 254 aa4.92□□□□□ -1.62
XPA-204ENST00000496104 WASP42768 502 aa4.92□□□□□ -1.62
XPA-204ENST00000496104 PDX1P52945 283 aa4.92□□□□□ -1.62
XPA-204ENST00000496104 YARSP54577 528 aaKnown RBP4.92□□□□□ -1.62
XPA-204ENST00000496104 SNX16P57768 344 aa4.92□□□□□ -1.62
XPA-204ENST00000496104 NLRP12P59046 1061 aa4.92□□□□□ -1.62
XPA-204ENST00000496104 ETF1P62495 437 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms