RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 MS4A13Q5J8X5 152 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 RFWD3Q6PCD5 774 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 C4orf50Q6ZRC1 276 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 ALYREFQ86V81 257 aaKnown RBP10.6□□□□□ -0.71
SAMM50-206ENST00000494795 DENND6AQ8IWF6 608 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 ABI1Q8IZP0 508 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 CRIPAKQ8N1N5 446 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 DIS3LQ8TF46 1054 aaKnown RBP10.6□□□□□ -0.71
SAMM50-206ENST00000494795 WBP2Q969T9 261 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 UTP4Q969X6 686 aaKnown RBP10.6□□□□□ -0.71
SAMM50-206ENST00000494795 CERS2Q96G23 380 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 UROC1Q96N76 676 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 SMIM14Q96QK8 99 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 CD248Q9HCU0 757 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 TMEM216Q9P0N5 145 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 ARMCX1Q9P291 453 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 KLHL14Q9P2G3 628 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 PCDHB7Q9Y5E2 793 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 CDY1Q9Y6F8 540 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 PATJQ8NI35 1801 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 NDC80O14777 642 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 GPR37O15354 613 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 CABYRO75952 493 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 GALTP07902 379 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 GABRB3P28472 473 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 ETFBP38117 255 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 CCR10P46092 362 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 HCAR3P49019 387 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 SLC10A7Q0GE19 358 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 DENND5AQ6IQ26 1287 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 FUT10Q6P4F1 479 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 BZW1Q7L1Q6 419 aaKnown RBP10.6□□□□□ -0.71
SAMM50-206ENST00000494795 URGCPQ8TCY9 931 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 PXYLP1Q8TE99 480 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 SH3RF2Q8TEC5 729 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 AUTS2Q8WXX7 1259 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 HMCESQ96FZ2 354 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 TSSK1BQ9BXA7 367 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.6□□□□□ -0.71
SAMM50-206ENST00000494795 CASS4Q9NQ75 786 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 IARS2Q9NSE4 1012 aaKnown RBP10.6□□□□□ -0.71
SAMM50-206ENST00000494795 TMEM161AQ9NX61 479 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 STK38LQ9Y2H1 464 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 SF3B1O75533 1304 aaKnown RBP eCLIP10.6□□□□□ -0.718e-6■■■■■ 107
SAMM50-206ENST00000494795 MYO7AQ13402 2215 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 KIAA0100Q14667 2235 aaKnown RBP10.6□□□□□ -0.71
SAMM50-206ENST00000494795 A0A0U1RQS6 177 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 TM9SF1O15321 606 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 STK10O94804 968 aaKnown RBP10.6□□□□□ -0.71
SAMM50-206ENST00000494795 CD1EP15812 388 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 TSHRP16473 764 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 AVPR1AP37288 418 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 CTBP1Q13363 440 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 PTPRCAPQ14761 206 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 ANKRD20A4Q4UJ75 823 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 TAF1BQ53T94 588 aaPredicted RBP10.6□□□□□ -0.71
SAMM50-206ENST00000494795 N4BP2L1Q5TBK1 243 aaPredicted RBP10.6□□□□□ -0.71
SAMM50-206ENST00000494795 RGS9BPQ6ZS82 235 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 MFSD6LQ8IWD5 586 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 ZNF683Q8IZ20 524 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 SLC25A41Q8N5S1 370 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 TTC16Q8NEE8 873 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 LRRC39Q96DD0 335 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 OSBPL2Q9H1P3 480 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 ZFATQ9P243 1243 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 ZNF180Q9UJW8 692 aa10.6□□□□□ -0.71
SAMM50-206ENST00000494795 CHD9Q3L8U1 2897 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 BUD23O43709 281 aaKnown RBP10.59□□□□□ -0.71
SAMM50-206ENST00000494795 SPAG6O75602 509 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 GJB5O95377 273 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 PEX11BO96011 259 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 ARNTP27540 789 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 ACVRL1P37023 503 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 MLLT6P55198 1093 aaPredicted RBP10.59□□□□□ -0.71
SAMM50-206ENST00000494795 MRPL58Q14197 206 aaKnown RBP10.59□□□□□ -0.71
SAMM50-206ENST00000494795 NADSYN1Q6IA69 706 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 FSTL4Q6MZW2 842 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 ESRP1Q6NXG1 681 aaKnown RBP10.59□□□□□ -0.71
SAMM50-206ENST00000494795 FBXL22Q6P050 247 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 CYB5D1Q6P9G0 228 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 NLRP9Q7RTR0 991 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 STRA8Q7Z7C7 330 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 DCLK2Q8N568 766 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 ATPAF2Q8N5M1 289 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 FBXO32Q969P5 355 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 PSMG2Q969U7 264 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 SLC39A13Q96H72 371 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 NSMCE3Q96MG7 304 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 EBF4Q9BQW3 602 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 FICDQ9BVA6 458 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 VPS11Q9H270 941 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 RXFP1Q9HBX9 757 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 SSU72Q9NP77 194 aaKnown RBP10.59□□□□□ -0.71
SAMM50-206ENST00000494795 RBM22Q9NW64 420 aaKnown RBP eCLIP10.59□□□□□ -0.71
SAMM50-206ENST00000494795 DLDP09622 509 aaKnown RBP10.59□□□□□ -0.71
SAMM50-206ENST00000494795 HOXD10P28358 340 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 SERPINB3P29508 390 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 CCNFP41002 786 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 ELF3P78545 371 aaPredicted RBP10.59□□□□□ -0.71
SAMM50-206ENST00000494795 MPP1Q00013 466 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms