RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 GPD1LQ8N335 351 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 OR13F1Q8NGS4 319 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 SREK1Q8WXA9 508 aaKnown RBP10.32□□□□□ -0.76
LINC00488-201ENST00000494582 TFAP2BQ92481 460 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 SNX19Q92543 992 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 SGCDQ92629 289 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 SH3YL1Q96HL8 342 aaPredicted RBP10.32□□□□□ -0.76
LINC00488-201ENST00000494582 WDR11Q9BZH6 1224 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 VRTNQ9H8Y1 702 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 CNTN6Q9UQ52 1028 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 PCDHA11Q9Y5I1 949 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 TLL2Q9Y6L7 1015 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 ARID2Q68CP9 1835 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 WDR27A2RRH5 827 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 TNFRSF10AO00220 468 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 CALB1P05937 261 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 ITGB5P18084 799 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 MIPP30301 263 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 ACOT2P49753 483 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 ZNF132P52740 706 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 NLRP11P59045 1033 aaKnown RBP10.32□□□□□ -0.76
LINC00488-201ENST00000494582 PSME3P61289 254 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 SNRPFP62306 86 aaKnown RBP10.32□□□□□ -0.76
LINC00488-201ENST00000494582 JAG1P78504 1218 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 IRF9Q00978 393 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 CNTN2Q02246 1040 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 NIPAL4Q0D2K0 466 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 E2F2Q14209 437 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 SPCS2Q15005 226 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 GPAT2Q6NUI2 795 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 UTS2BQ765I0 119 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 TAS1R3Q7RTX0 852 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 ZNF354CQ86Y25 554 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 ANKFN1Q8N957 763 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 SNX31Q8N9S9 440 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 BPIFB6Q8NFQ5 453 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 CMASQ8NFW8 434 aaPredicted RBP10.32□□□□□ -0.76
LINC00488-201ENST00000494582 HMGCLL1Q8TB92 370 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 PPWD1Q96BP3 646 aaKnown RBP10.32□□□□□ -0.76
LINC00488-201ENST00000494582 FAR2Q96K12 515 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 IL12RB2Q99665 862 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 PDZD7Q9H5P4 517 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 ZBTB26Q9HCK0 441 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 ANKMY1Q9P2S6 941 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 PCDHGC3Q9UN70 934 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 COPG1Q9Y678 874 aaKnown RBP10.32□□□□□ -0.76
LINC00488-201ENST00000494582 TRIM24O15164 1050 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 DHX15O43143 795 aaKnown RBP10.31□□□□□ -0.76
LINC00488-201ENST00000494582 S100BP04271 92 aaPredicted RBP10.31□□□□□ -0.76
LINC00488-201ENST00000494582 YBX3P16989 372 aaKnown RBP eCLIP10.31□□□□□ -0.76
LINC00488-201ENST00000494582 SLC7A1P30825 629 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 ABCG1P45844 678 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 HNRNPFP52597 415 aaKnown RBP10.31□□□□□ -0.76
LINC00488-201ENST00000494582 PGGT1BP53609 377 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 CLCQ05315 142 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 NSUN2Q08J23 767 aaKnown RBP eCLIP10.31□□□□□ -0.76
LINC00488-201ENST00000494582 MERTKQ12866 999 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 RFTN1Q14699 578 aaPredicted RBP10.31□□□□□ -0.76
LINC00488-201ENST00000494582 SLC36A3Q495N2 470 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 PTPN20Q4JDL3 420 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 PITRM1Q5JRX3 1037 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 CYP4V2Q6ZWL3 525 aaPredicted RBP10.31□□□□□ -0.76
LINC00488-201ENST00000494582 USP33Q8TEY7 942 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 CANT1Q8WVQ1 401 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 CAPSLQ8WWF8 208 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 C1orf50Q9BV19 199 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 GATA5Q9BWX5 397 aaPredicted RBP10.31□□□□□ -0.76
LINC00488-201ENST00000494582 EFCAB1Q9HAE3 211 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 DCDC2Q9UHG0 476 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 IFT52Q9Y366 437 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 ADAMTSL1Q8N6G6 1762 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 NOTOA8MTQ0 251 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 CLOCKO15516 846 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 CHEK2O96017 543 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 KRT7P08729 469 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 NCAM1P13591 858 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 YWHABP31946 246 aaKnown RBP10.31□□□□□ -0.76
LINC00488-201ENST00000494582 CCT8P50990 548 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 DLG2Q15700 870 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 RNF19BQ6ZMZ0 732 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 ITIH5Q86UX2 942 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 NAT16Q8N8M0 369 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 MFSD2AQ8NA29 543 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 TNIP2Q8NFZ5 429 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 OR5B17Q8NGF7 314 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 ACMSDQ8TDX5 336 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 CYGBQ8WWM9 190 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 ATXN7L3BQ96GX2 97 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 GLT1D1Q96MS3 346 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 HAPLN2Q9GZV7 340 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 TP63Q9H3D4 680 aaPredicted RBP10.31□□□□□ -0.76
LINC00488-201ENST00000494582 FANCEQ9HB96 536 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 PAK5Q9P286 719 aa10.31□□□□□ -0.76
LINC00488-201ENST00000494582 SUCOQ9UBS9 1254 aaKnown RBP10.31□□□□□ -0.76
LINC00488-201ENST00000494582 TOR1BO14657 336 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 HNRNPDLO14979 420 aaKnown RBP10.3□□□□□ -0.76
LINC00488-201ENST00000494582 TADA2AO75478 443 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 STAM2O75886 525 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 BMP2P12643 396 aa10.3□□□□□ -0.76
LINC00488-201ENST00000494582 ATP6V1B2P21281 511 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms