RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 ACE2Q9BYF1 805 aaPredicted RBP14.89□□□□□ -0.03
BRCA1-223ENST00000494123 EPHX3Q9H6B9 360 aa14.89□□□□□ -0.03
BRCA1-223ENST00000494123 SP110Q9HB58 689 aa14.89□□□□□ -0.03
BRCA1-223ENST00000494123 VPS51Q9UID3 782 aa14.89□□□□□ -0.03
BRCA1-223ENST00000494123 ERVW-1Q9UQF0 538 aa14.89□□□□□ -0.03
BRCA1-223ENST00000494123 EFR3BQ9Y2G0 817 aa14.89□□□□□ -0.03
BRCA1-223ENST00000494123 CHD5Q8TDI0 1954 aa14.89□□□□□ -0.03
BRCA1-223ENST00000494123 A0A0C4DFX4 3053 aa14.89□□□□□ -0.03
BRCA1-223ENST00000494123 NPC1O15118 1278 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 KDELR3O43731 214 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 SNAP91O60641 907 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 MAP3K6O95382 1288 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 SRPRAP08240 638 aaKnown RBP14.88□□□□□ -0.03
BRCA1-223ENST00000494123 TGM2P21980 687 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 GLDCP23378 1020 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 CTSOP43234 321 aaPredicted RBP14.88□□□□□ -0.03
BRCA1-223ENST00000494123 KIR2DL1P43626 348 aaPredicted RBP14.88□□□□□ -0.03
BRCA1-223ENST00000494123 MRPS21P82921 87 aaKnown RBP14.88□□□□□ -0.03
BRCA1-223ENST00000494123 GBE1Q04446 702 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 SERINC3Q13530 473 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 EGFLAMQ63HQ2 1017 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 CWF19L1Q69YN2 538 aaKnown RBP14.88□□□□□ -0.03
BRCA1-223ENST00000494123 SDE2Q6IQ49 451 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 BBS12Q6ZW61 710 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 TRMT11Q7Z4G4 463 aaKnown RBP14.88□□□□□ -0.03
BRCA1-223ENST00000494123 CHPFQ8IZ52 775 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 ATPAF2Q8N5M1 289 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 CCDC33Q8N5R6 958 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 RPLP0P6Q8NHW5 317 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 P3H4Q92791 437 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 RPL10LQ96L21 214 aaKnown RBP14.88□□□□□ -0.03
BRCA1-223ENST00000494123 WDR24Q96S15 920 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 NAPGQ99747 312 aaPredicted RBP14.88□□□□□ -0.03
BRCA1-223ENST00000494123 ZDHHC4Q9NPG8 344 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 THAP10Q9P2Z0 257 aaPredicted RBP14.88□□□□□ -0.03
BRCA1-223ENST00000494123 NYNRINQ9P2P1 1898 aaKnown RBP14.88□□□□□ -0.03
BRCA1-223ENST00000494123 CTAGE9A4FU28 777 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 ZSCAN5CA6NGD5 496 aaPredicted RBP14.88□□□□□ -0.03
BRCA1-223ENST00000494123 DCNP07585 359 aaKnown RBP14.88□□□□□ -0.03
BRCA1-223ENST00000494123 MX2P20592 715 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 CXCR5P32302 372 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 GEMIN4P57678 1058 aaKnown RBP14.88□□□□□ -0.03
BRCA1-223ENST00000494123 ZNF234Q14588 700 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 NPNTQ6UXI9 565 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 SERPINA13PQ6UXR4 307 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 Q6ZS52 159 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 BZW1Q7L1Q6 419 aaKnown RBP14.88□□□□□ -0.03
BRCA1-223ENST00000494123 ALLCQ8N6M5 410 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 USP33Q8TEY7 942 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 HAUS1Q96CS2 278 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 DTLQ9NZJ0 730 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 IPO11Q9UI26 975 aaKnown RBP14.88□□□□□ -0.03
BRCA1-223ENST00000494123 SLC8A2Q9UPR5 921 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 RAD54BQ9Y620 910 aa14.88□□□□□ -0.03
BRCA1-223ENST00000494123 ATG2BQ96BY7 2078 aa14.87□□□□□ -0.03
BRCA1-223ENST00000494123 ANTXRLA6NF34 631 aa14.87□□□□□ -0.03
BRCA1-223ENST00000494123 APOC4-APOC2K7ER74 178 aa14.87□□□□□ -0.03
BRCA1-223ENST00000494123 CEP104O60308 925 aa14.87□□□□□ -0.03
BRCA1-223ENST00000494123 ATG13O75143 517 aa14.87□□□□□ -0.03
BRCA1-223ENST00000494123 KLF8O95600 359 aaPredicted RBP14.87□□□□□ -0.03
BRCA1-223ENST00000494123 APOC2P02655 101 aa14.87□□□□□ -0.03
BRCA1-223ENST00000494123 HNRNPLP14866 589 aaKnown RBP eCLIP14.87□□□□□ -0.03
BRCA1-223ENST00000494123 AOC1P19801 751 aa14.87□□□□□ -0.03
BRCA1-223ENST00000494123 RPS9P46781 194 aaKnown RBP14.87□□□□□ -0.03
BRCA1-223ENST00000494123 NR2C2P49116 596 aa14.87□□□□□ -0.03
BRCA1-223ENST00000494123 STK19P49842 368 aaPredicted RBP14.87□□□□□ -0.03
BRCA1-223ENST00000494123 CLCN5P51795 746 aa14.87□□□□□ -0.03
BRCA1-223ENST00000494123 ARF5P84085 180 aa14.87□□□□□ -0.03
BRCA1-223ENST00000494123 ADCY2Q08462 1091 aa14.87□□□□□ -0.03
BRCA1-223ENST00000494123 FZD5Q13467 585 aa14.87□□□□□ -0.03
BRCA1-223ENST00000494123 PTPRNQ16849 979 aa14.87□□□□□ -0.03
BRCA1-223ENST00000494123 LINGO4Q6UY18 593 aa14.87□□□□□ -0.03
BRCA1-223ENST00000494123 LRRC49Q8IUZ0 686 aa14.87□□□□□ -0.03
BRCA1-223ENST00000494123 TP53INP2Q8IXH6 220 aa14.87□□□□□ -0.03
BRCA1-223ENST00000494123 IL17RCQ8NAC3 791 aa14.87□□□□□ -0.03
BRCA1-223ENST00000494123 ATP11CQ8NB49 1132 aa14.87□□□□□ -0.03
BRCA1-223ENST00000494123 CCNYQ8ND76 341 aa14.87□□□□□ -0.03
BRCA1-223ENST00000494123 CLDN23Q96B33 292 aa14.87□□□□□ -0.03
BRCA1-223ENST00000494123 C16orf45Q96MC5 204 aaPredicted RBP14.87□□□□□ -0.03
BRCA1-223ENST00000494123 CACNA2D2Q9NY47 1150 aa14.87□□□□□ -0.03
BRCA1-223ENST00000494123 PPP1R12AO14974 1030 aaPredicted RBP14.86□□□□□ -0.03
BRCA1-223ENST00000494123 PRAMEF11O60813 436 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 ZMPSTE24O75844 475 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 PECAM1P16284 738 aaPredicted RBP14.86□□□□□ -0.03
BRCA1-223ENST00000494123 NTSR1P30989 418 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 CASQ1P31415 396 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 GARSP41250 739 aaKnown RBP14.86□□□□□ -0.03
BRCA1-223ENST00000494123 IL12RB1P42701 662 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 WASP42768 502 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 MAGEA9P43362 315 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 ETF1P62495 437 aaKnown RBP14.86□□□□□ -0.03
BRCA1-223ENST00000494123 IL10RBQ08334 325 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 SLC20A2Q08357 652 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 GALNT2Q10471 571 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 SLC10A2Q12908 348 aaPredicted RBP14.86□□□□□ -0.03
BRCA1-223ENST00000494123 PDK1Q15118 436 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 ACCSLQ4AC99 568 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 HSF5Q4G112 596 aaPredicted RBP14.86□□□□□ -0.03
BRCA1-223ENST00000494123 LEKR1Q6ZMV7 388 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 ARHGAP36Q6ZRI8 547 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms