RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 LRRC72A6NJI9 287 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 ERVH48-1M5A8F1 160 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 XPO1O14980 1071 aaKnown RBP13.56□□□□□ -0.24
HDAC3-213ENST00000492506 LATO43561 262 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 ACTN4O43707 911 aaKnown RBP13.56□□□□□ -0.24
HDAC3-213ENST00000492506 RNASEH2AO75792 299 aaKnown RBP13.56□□□□□ -0.24
HDAC3-213ENST00000492506 GABBR2O75899 941 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 GLDCP23378 1020 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 ACP1P24666 158 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 SLC8A1P32418 973 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 CSKP41240 450 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 ADPRHP54922 357 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 ENPEPQ07075 957 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 ADIGQ0VDE8 80 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 CASP8Q14790 479 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 SLMAPQ14BN4 828 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 NFIL3Q16649 462 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 PROX2Q3B8N5 592 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 NADSYN1Q6IA69 706 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 MSANTD2Q6P1R3 559 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 INTS8Q75QN2 995 aaKnown RBP13.56□□□□□ -0.24
HDAC3-213ENST00000492506 MMAAQ8IVH4 418 aaKnown RBP13.56□□□□□ -0.24
HDAC3-213ENST00000492506 KDM1BQ8NB78 822 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 FIBINQ8TAL6 211 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 RNF139Q8WU17 664 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 TATDN2Q93075 761 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 FAXDC2Q96IV6 333 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 SERAC1Q96JX3 654 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 PRICKLE1Q96MT3 831 aaPredicted RBP13.56□□□□□ -0.24
HDAC3-213ENST00000492506 PLCD4Q9BRC7 762 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 DNAI2Q9GZS0 605 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 TMEM8AQ9HCN3 771 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 ARHGAP20Q9P2F6 1191 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 SERTAD1Q9UHV2 236 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 PCDHA7Q9UN72 937 aa13.56□□□□□ -0.24
HDAC3-213ENST00000492506 SPTA1P02549 2419 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 ANKRD33BA6NCL7 494 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 TTC34A8MYJ7 566 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 RNASEH1O60930 286 aaKnown RBP13.55□□□□□ -0.24
HDAC3-213ENST00000492506 ASLP04424 464 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 NR2F2P24468 414 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 CTSOP43234 321 aaPredicted RBP13.55□□□□□ -0.24
HDAC3-213ENST00000492506 SLC8A3P57103 927 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 PPP2CBP62714 309 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 PPP2CAP67775 309 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 KCNH2Q12809 1159 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 GOLGA7BQ2TAP0 167 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 FSCBQ5H9T9 825 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 WLSQ5T9L3 541 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 SCML4Q8N228 414 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 TTC39CQ8N584 583 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 MFSD2AQ8NA29 543 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 FAM76AQ8TAV0 307 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 FAM131CQ96AQ9 280 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 WBP1Q96G27 269 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 PAGE5Q96GU1 130 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 HIC2Q96JB3 615 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 SH3GL3Q99963 347 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 OMDQ99983 421 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 SEMA4CQ9C0C4 833 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 MMRN2Q9H8L6 949 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 FAM204AQ9H8W3 233 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 ABCC13Q9NSE7 274 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 EXOC1Q9NV70 894 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 IFNKQ9P0W0 207 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 TSPAN16Q9UKR8 245 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 ERVW-1Q9UQF0 538 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 FAM169AQ9Y6X4 670 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 ITIH6Q6UXX5 1313 aa13.55□□□□□ -0.24
HDAC3-213ENST00000492506 BOD1L1Q8NFC6 3051 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 TARSL2A2RTX5 802 aaKnown RBP13.54□□□□□ -0.24
HDAC3-213ENST00000492506 CAPN8A6NHC0 703 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 TRIM38O00635 465 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 IRAK2O43187 625 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 CALUO43852 315 aaPredicted RBP13.54□□□□□ -0.24
HDAC3-213ENST00000492506 ACSL4O60488 711 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 GOT1P17174 413 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 DRD3P35462 400 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 DAOAP59103 153 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 ST8SIA6P61647 398 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 RPS24P62847 133 aaKnown RBP13.54□□□□□ -0.24
HDAC3-213ENST00000492506 IFFO1Q0D2I5 559 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 SFSWAPQ12872 951 aaKnown RBP13.54□□□□□ -0.24
HDAC3-213ENST00000492506 KRT39Q6A163 491 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 SND1Q7KZF4 910 aaKnown RBP eCLIP13.54□□□□□ -0.24
HDAC3-213ENST00000492506 VSTM4Q8IW00 320 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 MFN1Q8IWA4 741 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 FAM186BQ8IYM0 893 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 OXR1Q8N573 874 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 ZNF557Q8N988 423 aaPredicted RBP13.54□□□□□ -0.24
HDAC3-213ENST00000492506 KCTD13Q8WZ19 329 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 PTPRN2Q92932 1015 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 ITFG2Q969R8 447 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 AZIN2Q96A70 460 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 LRRC4Q9HBW1 653 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 STIM2Q9P246 746 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 SLCO3A1Q9UIG8 710 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 PCDHB1Q9Y5F3 818 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 BSNQ9UPA5 3926 aa13.54□□□□□ -0.24
HDAC3-213ENST00000492506 SIGLEC6O43699 453 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms