RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 TRMT10BQ6PF06 316 aaKnown RBP11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 KRT27Q7Z3Y8 459 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 KBTBD6Q86V97 674 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 ZNF420Q8TAQ5 688 aaPredicted RBP11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 PNPT1Q8TCS8 783 aaKnown RBP11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 FAM162AQ96A26 154 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 TBCBQ99426 244 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 APOL2Q9BQE5 337 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 HERPUD2Q9BSE4 406 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 CEP41Q9BYV8 373 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 EXOSC4Q9NPD3 245 aaKnown RBP11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 C8orf4Q9NR00 106 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 SMPD3Q9NY59 655 aaPredicted RBP11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 BTBD3Q9Y2F9 522 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 MTF2Q9Y483 593 aaPredicted RBP11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 MYPNQ86TC9 1320 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 PNMA8CA0A1B0GUJ8 204 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 TRIM64CA6NLI5 447 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 KCNU1A8MYU2 1149 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 PSMD11O00231 422 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 SLC4A1P02730 911 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 LCP1P13796 627 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 KCNA2P16389 499 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 FUT4P22083 530 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 ALDH1B1P30837 517 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 GSSP48637 474 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 IKBKEQ14164 716 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 GRIK5Q16478 980 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 SPANXN2Q5MJ10 180 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 TDRD10Q5VZ19 366 aaKnown RBP11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 NAPEPLDQ6IQ20 393 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 KCNMB4Q86W47 210 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 TMEM161BQ8NDZ6 487 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 APBA2Q99767 749 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 PCDHAC1Q9H158 963 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 JPH1Q9HDC5 661 aaPredicted RBP11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 KCNQ5Q9NR82 932 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 TMEM9Q9P0T7 183 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 AP4E1Q9UPM8 1137 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 ANKRD6Q9Y2G4 727 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 CAPN14A8MX76 684 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 CXorf49A8MYA2 514 aaPredicted RBP11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 IL1BP01584 269 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 TFEBP19484 476 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 SLC7A1P30825 629 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 SLC9B1Q4ZJI4 515 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 SLC9A4Q6AI14 798 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 TMIGD2Q96BF3 282 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 NGLY1Q96IV0 654 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 MFSD14AQ96MC6 490 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 TPRKBQ9Y3C4 175 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 BAZ2AQ9UIF9 1905 aaKnown RBP11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 MYO1GB0I1T2 1018 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 H3BNH8 94 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 BUD23O43709 281 aaKnown RBP11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 LRCH4O75427 683 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 CABYRO75952 493 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 TRUB2O95900 331 aaKnown RBP11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 ZNF182P17025 639 aaPredicted RBP11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 IL12AP29459 219 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 MAP3K7CLP57077 242 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 PTPN11Q06124 597 aaPredicted RBP11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 TNK2Q07912 1038 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 MERTKQ12866 999 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 BNIP2Q12982 314 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 MSLNQ13421 630 aaPredicted RBP11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 TOP3AQ13472 1001 aaPredicted RBP11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 SNAPC2Q13487 334 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 CSHL1Q14406 222 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 MGAT5BQ3V5L5 792 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 ARMCX4Q5H9R4 360 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 CCNYL2Q5T2Q4 361 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 ALDH16A1Q8IZ83 802 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 SVOPQ8N4V2 548 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 EHD1Q9H4M9 534 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 PNPLA8Q9NP80 782 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 TBC1D13Q9NVG8 400 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 KANSL3Q9P2N6 904 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 EBF1Q9UH73 591 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 N4BP2Q86UW6 1770 aaPredicted RBP11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 CCDC162PA2VCL2 907 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 STX16-NPEPL1H3BU86 382 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 SH3BP5O60239 455 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 NRP2O60462 931 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 BCAS2O75934 225 aaPredicted RBP11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 RAD17O75943 681 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 TOMM70O94826 608 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 OXSR1O95747 527 aaPredicted RBP11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 PRKCBP05771 671 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 SOX6P35712 828 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 IL12RB1P42701 662 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 COPZ1P61923 177 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 MYBPC1Q00872 1141 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 EPS8Q12929 822 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 TRIM32Q13049 653 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 ITPK1Q13572 414 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 GRM2Q14416 872 aa11.46□□□□□ -0.57
CRNKL1-204ENST00000490910 TGFBIQ15582 683 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms