RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 CACNA1GO43497 2377 aa16.1■□□□□ 0.17
NUP58-213ENST00000490231 A0A087WV48 116 aa16.09■□□□□ 0.17
NUP58-213ENST00000490231 M0QYT0 321 aa16.09■□□□□ 0.17
NUP58-213ENST00000490231 PLK4O00444 970 aa16.09■□□□□ 0.17
NUP58-213ENST00000490231 ZNF18P17022 549 aa16.09■□□□□ 0.17
NUP58-213ENST00000490231 KRT9P35527 623 aa16.09■□□□□ 0.17
NUP58-213ENST00000490231 HNF1BP35680 557 aa16.09■□□□□ 0.17
NUP58-213ENST00000490231 ACADVLP49748 655 aa16.09■□□□□ 0.17
NUP58-213ENST00000490231 CNTN1Q12860 1018 aa16.09■□□□□ 0.17
NUP58-213ENST00000490231 DNAJC3Q13217 504 aa16.09■□□□□ 0.17
NUP58-213ENST00000490231 PTPN20Q4JDL3 420 aa16.09■□□□□ 0.17
NUP58-213ENST00000490231 Q6ZVU0 165 aa16.09■□□□□ 0.17
NUP58-213ENST00000490231 KANSL1Q7Z3B3 1105 aa16.09■□□□□ 0.17
NUP58-213ENST00000490231 C14orf80Q86SX3 495 aa16.09■□□□□ 0.17
NUP58-213ENST00000490231 SPATS2Q86XZ4 545 aaKnown RBP16.09■□□□□ 0.17
NUP58-213ENST00000490231 IRF2BP1Q8IU81 584 aa16.09■□□□□ 0.17
NUP58-213ENST00000490231 SYNCQ9H7C4 482 aa16.09■□□□□ 0.17
NUP58-213ENST00000490231 PREBQ9HCU5 417 aa16.09■□□□□ 0.17
NUP58-213ENST00000490231 SIX2Q9NPC8 291 aa16.09■□□□□ 0.17
NUP58-213ENST00000490231 TMEM51Q9NW97 253 aa16.09■□□□□ 0.17
NUP58-213ENST00000490231 ARHGEF38Q9NXL2 777 aa16.09■□□□□ 0.17
NUP58-213ENST00000490231 DNAJC12Q9UKB3 198 aa16.09■□□□□ 0.17
NUP58-213ENST00000490231 HS3ST2Q9Y278 367 aa16.09■□□□□ 0.17
NUP58-213ENST00000490231 NBEAQ8NFP9 2946 aa16.08■□□□□ 0.17
NUP58-213ENST00000490231 ADAMTS20P59510 1910 aa16.08■□□□□ 0.16
NUP58-213ENST00000490231 PRAMEF26H0Y7S4 382 aa16.08■□□□□ 0.16
NUP58-213ENST00000490231 CBX4O00257 560 aa16.08■□□□□ 0.16
NUP58-213ENST00000490231 RNGTTO60942 597 aaKnown RBP16.08■□□□□ 0.16
NUP58-213ENST00000490231 SRCP12931 536 aa16.08■□□□□ 0.16
NUP58-213ENST00000490231 JUPP14923 745 aa16.08■□□□□ 0.16
NUP58-213ENST00000490231 MAT2AP31153 395 aaKnown RBP16.08■□□□□ 0.16
NUP58-213ENST00000490231 CLCN1P35523 988 aa16.08■□□□□ 0.16
NUP58-213ENST00000490231 CXCR3P49682 368 aa16.08■□□□□ 0.16
NUP58-213ENST00000490231 KRT83P78385 493 aa16.08■□□□□ 0.16
NUP58-213ENST00000490231 BNIP3Q12983 259 aa16.08■□□□□ 0.16
NUP58-213ENST00000490231 ILKQ13418 452 aa16.08■□□□□ 0.16
NUP58-213ENST00000490231 STAT4Q14765 748 aa16.08■□□□□ 0.16
NUP58-213ENST00000490231 ACAP1Q15027 740 aa16.08■□□□□ 0.16
NUP58-213ENST00000490231 SETMARQ53H47 684 aaPredicted RBP16.08■□□□□ 0.16
NUP58-213ENST00000490231 BRMS1LQ5PSV4 323 aa16.08■□□□□ 0.16
NUP58-213ENST00000490231 ACBD5Q5T8D3 534 aaPredicted RBP16.08■□□□□ 0.16
NUP58-213ENST00000490231 OTUD1Q5VV17 481 aaPredicted RBP16.08■□□□□ 0.16
NUP58-213ENST00000490231 SLC47A2Q86VL8 602 aa16.08■□□□□ 0.16
NUP58-213ENST00000490231 NT5C3BQ969T7 300 aa16.08■□□□□ 0.16
NUP58-213ENST00000490231 PGAP3Q96FM1 320 aaPredicted RBP16.08■□□□□ 0.16
NUP58-213ENST00000490231 CCDC114Q96M63 670 aa16.08■□□□□ 0.16
NUP58-213ENST00000490231 NPY6RQ99463 290 aa16.08■□□□□ 0.16
NUP58-213ENST00000490231 C2orf49Q9BVC5 232 aaPredicted RBP16.08■□□□□ 0.16
NUP58-213ENST00000490231 MUC3BQ9H195 1237 aa16.08■□□□□ 0.16
NUP58-213ENST00000490231 WDCPQ9H6R7 721 aa16.08■□□□□ 0.16
NUP58-213ENST00000490231 PIGVQ9NUD9 493 aa16.08■□□□□ 0.16
NUP58-213ENST00000490231 AJAP1Q9UKB5 411 aaPredicted RBP16.08■□□□□ 0.16
NUP58-213ENST00000490231 STAP1Q9ULZ2 295 aa16.08■□□□□ 0.16
NUP58-213ENST00000490231 NYNRINQ9P2P1 1898 aaKnown RBP16.08■□□□□ 0.16
NUP58-213ENST00000490231 FOXN3O00409 490 aaPredicted RBP16.07■□□□□ 0.16
NUP58-213ENST00000490231 GGCXP38435 758 aa16.07■□□□□ 0.16
NUP58-213ENST00000490231 MTIF2P46199 727 aaKnown RBP16.07■□□□□ 0.16
NUP58-213ENST00000490231 TAS2R38P59533 333 aa16.07■□□□□ 0.16
NUP58-213ENST00000490231 BPIFB4P59827 614 aa16.07■□□□□ 0.16
NUP58-213ENST00000490231 CCDC15Q0P6D6 951 aa16.07■□□□□ 0.16
NUP58-213ENST00000490231 CAMK4Q16566 473 aa16.07■□□□□ 0.16
NUP58-213ENST00000490231 SOWAHCQ53LP3 525 aaPredicted RBP16.07■□□□□ 0.16
NUP58-213ENST00000490231 C6orf118Q5T5N4 469 aa16.07■□□□□ 0.16
NUP58-213ENST00000490231 NEK5Q6P3R8 708 aa16.07■□□□□ 0.16
NUP58-213ENST00000490231 SETD3Q86TU7 594 aaPredicted RBP16.07■□□□□ 0.16
NUP58-213ENST00000490231 ZNF683Q8IZ20 524 aa16.07■□□□□ 0.16
NUP58-213ENST00000490231 MLKLQ8NB16 471 aa16.07■□□□□ 0.16
NUP58-213ENST00000490231 NXPE2Q96DL1 559 aa16.07■□□□□ 0.16
NUP58-213ENST00000490231 TKTL2Q9H0I9 626 aa16.07■□□□□ 0.16
NUP58-213ENST00000490231 SIK2Q9H0K1 926 aa16.07■□□□□ 0.16
NUP58-213ENST00000490231 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.07■□□□□ 0.16
NUP58-213ENST00000490231 FARP1Q9Y4F1 1045 aaPredicted RBP16.07■□□□□ 0.16
NUP58-213ENST00000490231 PAXBP1Q9Y5B6 917 aa16.07■□□□□ 0.16
NUP58-213ENST00000490231 DRGXA6NNA5 263 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 I6L893 689 aaPredicted RBP16.06■□□□□ 0.16
NUP58-213ENST00000490231 CNTN5O94779 1100 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 ADCY5O95622 1261 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 MT-CO1P00395 513 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 F9P00740 461 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 CTSLP07711 333 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 RHOCP08134 193 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 CKMT2P17540 419 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 CHRNA3P32297 505 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 CDH5P33151 784 aaPredicted RBP16.06■□□□□ 0.16
NUP58-213ENST00000490231 SCNN1AP37088 669 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 GABRB2P47870 512 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 CLCN6P51797 869 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 UBE2HP62256 183 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 MAN2A1Q16706 1144 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 POM121L1PQ3SYA9 428 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 ALFQ53S48 1182 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 PIP5KL1Q5T9C9 394 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 FBXL19Q6PCT2 694 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 FAM71AQ8IYT1 594 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 ATP11CQ8NB49 1132 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 TMEM145Q8NBT3 493 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 TMEM35BQ8NCS4 154 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 TMIEQ8NEW7 156 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 OR2A12Q8NGT7 310 aa16.06■□□□□ 0.16
NUP58-213ENST00000490231 C1orf74Q96LT6 269 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms