RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 KLHDC7BQ96G42 594 aa12.11□□□□□ -0.47
FDPS-215ENST00000490140 SRRTQ9BXP5 876 aaKnown RBP12.11□□□□□ -0.47
FDPS-215ENST00000490140 INTS2Q9H0H0 1204 aaKnown RBP12.11□□□□□ -0.47
FDPS-215ENST00000490140 MUC3BQ9H195 1237 aa12.11□□□□□ -0.47
FDPS-215ENST00000490140 SYNCQ9H7C4 482 aa12.11□□□□□ -0.47
FDPS-215ENST00000490140 USP29Q9HBJ7 922 aa12.11□□□□□ -0.47
FDPS-215ENST00000490140 RRN3Q9NYV6 651 aa12.11□□□□□ -0.47
FDPS-215ENST00000490140 NCKIPSDQ9NZQ3 722 aa12.11□□□□□ -0.47
FDPS-215ENST00000490140 XPO7Q9UIA9 1087 aaKnown RBP12.11□□□□□ -0.47
FDPS-215ENST00000490140 ARID1BQ8NFD5 2236 aaPredicted RBP12.1□□□□□ -0.47
FDPS-215ENST00000490140 NEMP2A6NFY4 417 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 CBX4O00257 560 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 PRNPP04156 253 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 RECQLP46063 649 aaPredicted RBP12.1□□□□□ -0.47
FDPS-215ENST00000490140 DUSP3P51452 185 aaPredicted RBP12.1□□□□□ -0.47
FDPS-215ENST00000490140 CLCN6P51797 869 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 MARSP56192 900 aaKnown RBP12.1□□□□□ -0.47
FDPS-215ENST00000490140 PCBP4P57723 403 aaKnown RBP12.1□□□□□ -0.47
FDPS-215ENST00000490140 CNTN1Q12860 1018 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 DLG2Q15700 870 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 TBC1D25Q3MII6 688 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 AGBL4Q5VU57 503 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 TTI2Q6NXR4 508 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 DENND1BQ6P3S1 775 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 Q6ZVU0 165 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 GPR155Q7Z3F1 870 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 DCP2Q8IU60 420 aaKnown RBP12.1□□□□□ -0.47
FDPS-215ENST00000490140 ARHGEF19Q8IW93 802 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 TRIM59Q8IWR1 403 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 DCBLD1Q8N8Z6 715 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 ZNF248Q8NDW4 579 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 FRS2Q8WU20 508 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 NELFBQ8WX92 580 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 IFT43Q96FT9 208 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 BBC3Q96PG8 261 aaPredicted RBP12.1□□□□□ -0.47
FDPS-215ENST00000490140 DEPDC7Q96QD5 511 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 PRMT1Q99873 361 aaKnown RBP12.1□□□□□ -0.47
FDPS-215ENST00000490140 FEM1AQ9BSK4 669 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 PRORYQ9H606 182 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 UBE2TQ9NPD8 197 aaPredicted RBP12.1□□□□□ -0.47
FDPS-215ENST00000490140 PPM1HQ9ULR3 514 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 HS3ST2Q9Y278 367 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 SHROOM3Q8TF72 1996 aa12.1□□□□□ -0.47
FDPS-215ENST00000490140 SETXQ7Z333 2677 aaKnown RBP12.1□□□□□ -0.47
FDPS-215ENST00000490140 SYNJ2BP-COX16A0A087WUM0 186 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 KPNA3O00505 521 aaPredicted RBP12.09□□□□□ -0.47
FDPS-215ENST00000490140 BRINP1O60477 761 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 GP1BAP07359 652 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 THEGLP0DJG4 465 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 HNRNPA2B1P22626 353 aaKnown RBP12.09□□□□□ -0.47
FDPS-215ENST00000490140 CDH4P55283 916 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 BNIP3Q12983 259 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 PAK1Q13153 545 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 PROX2Q3B8N5 592 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 CXorf57Q6NSI4 855 aaKnown RBP12.09□□□□□ -0.47
FDPS-215ENST00000490140 FBXL22Q6P050 247 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 CIR1Q86X95 450 aaPredicted RBP12.09□□□□□ -0.47
FDPS-215ENST00000490140 SPATS2Q86XZ4 545 aaKnown RBP12.09□□□□□ -0.47
FDPS-215ENST00000490140 ZDHHC17Q8IUH5 632 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 SH2D3CQ8N5H7 860 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 ATP11CQ8NB49 1132 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 OR4C6Q8NH72 309 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 ZNF606Q8WXB4 792 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 PPP1R13BQ96KQ4 1090 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 KREMEN1Q96MU8 473 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 SLC2A13Q96QE2 648 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 LGMNQ99538 433 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 DUSP23Q9BVJ7 150 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 KLHL11Q9NVR0 708 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 COX16Q9P0S2 106 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 ARHGAP20Q9P2F6 1191 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 VANGL2Q9ULK5 521 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 STAP1Q9ULZ2 295 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 CTNND2Q9UQB3 1225 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 MYLKQ15746 1914 aa12.09□□□□□ -0.47
FDPS-215ENST00000490140 ASH1LQ9NR48 2969 aaKnown RBP12.08□□□□□ -0.48
FDPS-215ENST00000490140 H3BM21 787 aa12.08□□□□□ -0.48
FDPS-215ENST00000490140 WNT9AO14904 365 aa12.08□□□□□ -0.48
FDPS-215ENST00000490140 SIGLEC6O43699 453 aa12.08□□□□□ -0.48
FDPS-215ENST00000490140 BNIP3LO60238 219 aa12.08□□□□□ -0.48
FDPS-215ENST00000490140 SDC3O75056 442 aa12.08□□□□□ -0.48
FDPS-215ENST00000490140 DAB1O75553 588 aa12.08□□□□□ -0.48
FDPS-215ENST00000490140 VAV1P15498 845 aa12.08□□□□□ -0.48
FDPS-215ENST00000490140 ITPKBP27987 946 aa12.08□□□□□ -0.48
FDPS-215ENST00000490140 USP8P40818 1118 aa12.08□□□□□ -0.48
FDPS-215ENST00000490140 HNRNPKP61978 463 aaKnown RBP eCLIP12.08□□□□□ -0.48
FDPS-215ENST00000490140 INSM1Q01101 510 aaPredicted RBP12.08□□□□□ -0.48
FDPS-215ENST00000490140 CENPCQ03188 943 aa12.08□□□□□ -0.48
FDPS-215ENST00000490140 KCNMA1Q12791 1236 aa12.08□□□□□ -0.48
FDPS-215ENST00000490140 NME3Q13232 169 aa12.08□□□□□ -0.48
FDPS-215ENST00000490140 AUHQ13825 339 aaKnown RBP12.08□□□□□ -0.48
FDPS-215ENST00000490140 BRMS1LQ5PSV4 323 aa12.08□□□□□ -0.48
FDPS-215ENST00000490140 LRRC31Q6UY01 552 aa12.08□□□□□ -0.48
FDPS-215ENST00000490140 C11orf57Q6ZUT1 292 aaPredicted RBP12.08□□□□□ -0.48
FDPS-215ENST00000490140 KANSL1Q7Z3B3 1105 aa12.08□□□□□ -0.48
FDPS-215ENST00000490140 SETD3Q86TU7 594 aaPredicted RBP12.08□□□□□ -0.48
FDPS-215ENST00000490140 HORMAD1Q86X24 394 aa12.08□□□□□ -0.48
FDPS-215ENST00000490140 DCAF4L2Q8NA75 395 aa12.08□□□□□ -0.48
FDPS-215ENST00000490140 TMEM145Q8NBT3 493 aa12.08□□□□□ -0.48
FDPS-215ENST00000490140 C1orf131Q8NDD1 294 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms