RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 RAB6CQ9H0N0 254 aa18.28■□□□□ 0.52
ABCF3-217ENST00000489719 HAUS4Q9H6D7 363 aa18.28■□□□□ 0.52
ABCF3-217ENST00000489719 VPS51Q9UID3 782 aa18.28■□□□□ 0.52
ABCF3-217ENST00000489719 FZD4Q9ULV1 537 aa18.28■□□□□ 0.52
ABCF3-217ENST00000489719 GON4LQ3T8J9 2241 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 MCF2LO15068 1137 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 SNAP91O60641 907 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 MT-CO1P00395 513 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 CEACAM1P13688 526 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 RRM1P23921 792 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 CD27P26842 260 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 ZNF143P52747 638 aaPredicted RBP18.27■□□□□ 0.52
ABCF3-217ENST00000489719 HDAC4P56524 1084 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 NRG1Q02297 640 aaPredicted RBP18.27■□□□□ 0.52
ABCF3-217ENST00000489719 SLC20A2Q08357 652 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 KLHL30Q0D2K2 578 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 TEAD4Q15561 434 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 N4BP2L1Q5TBK1 243 aaPredicted RBP18.27■□□□□ 0.52
ABCF3-217ENST00000489719 KIAA0895LQ68EN5 471 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 RETSATQ6NUM9 610 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.27■□□□□ 0.52
ABCF3-217ENST00000489719 SLFN11Q7Z7L1 901 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 DRC7Q8IY82 874 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 DCAF4L2Q8NA75 395 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 OR7D4Q8NG98 312 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 OR2T34Q8NGX1 318 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 OR14C36Q8NHC7 312 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 MCEEQ96PE7 176 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 PSMB7Q99436 277 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 PARVAQ9NVD7 372 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 SERGEFQ9UGK8 458 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 ADAMTS1Q9UHI8 967 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 HS3ST2Q9Y278 367 aa18.27■□□□□ 0.52
ABCF3-217ENST00000489719 C1QTNF3-AMACRE9PGA6 284 aa18.26■□□□□ 0.51
ABCF3-217ENST00000489719 CBX4O00257 560 aa18.26■□□□□ 0.51
ABCF3-217ENST00000489719 SRCP12931 536 aa18.26■□□□□ 0.51
ABCF3-217ENST00000489719 RHOQP17081 205 aa18.26■□□□□ 0.51
ABCF3-217ENST00000489719 AFF3P51826 1226 aaKnown RBP18.26■□□□□ 0.51
ABCF3-217ENST00000489719 RPL7AP62424 266 aaKnown RBP18.26■□□□□ 0.51
ABCF3-217ENST00000489719 GNA12Q03113 381 aa18.26■□□□□ 0.51
ABCF3-217ENST00000489719 GRIK2Q13002 908 aa18.26■□□□□ 0.51
ABCF3-217ENST00000489719 NCEH1Q6PIU2 408 aa18.26■□□□□ 0.51
ABCF3-217ENST00000489719 IL27RAQ6UWB1 636 aa18.26■□□□□ 0.51
ABCF3-217ENST00000489719 Q6ZVU0 165 aa18.26■□□□□ 0.51
ABCF3-217ENST00000489719 AADATQ8N5Z0 425 aa18.26■□□□□ 0.51
ABCF3-217ENST00000489719 CCDC185Q8N715 623 aa18.26■□□□□ 0.51
ABCF3-217ENST00000489719 NTAN1Q96AB6 310 aa18.26■□□□□ 0.51
ABCF3-217ENST00000489719 CNPY3Q9BT09 278 aa18.26■□□□□ 0.51
ABCF3-217ENST00000489719 ATP13A1Q9HD20 1204 aa18.26■□□□□ 0.51
ABCF3-217ENST00000489719 DNAAF2Q9NVR5 837 aaKnown RBP18.26■□□□□ 0.51
ABCF3-217ENST00000489719 TAS2R14Q9NYV8 317 aa18.26■□□□□ 0.51
ABCF3-217ENST00000489719 PPM1HQ9ULR3 514 aa18.26■□□□□ 0.51
ABCF3-217ENST00000489719 TBC1D3DA0A087WVF3 549 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 TBC1D3IA0A087WXS9 549 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 TBC1D3EA0A087X179 549 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 TBC1D3KA0A087X1G2 549 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 TCRBV5S1A1TA0A578 114 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 TBC1D3FA6NER0 549 aaPredicted RBP18.25■□□□□ 0.51
ABCF3-217ENST00000489719 TBC1D3LB9A6J9 549 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 K7ERQ8 282 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 ALOX15BO15296 676 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 FTLP02792 175 aaPredicted RBP18.25■□□□□ 0.51
ABCF3-217ENST00000489719 TBC1D3HP0C7X1 549 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 GZMAP12544 262 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 ETFBP38117 255 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 PRKCIP41743 596 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 RECQLP46063 649 aaPredicted RBP18.25■□□□□ 0.51
ABCF3-217ENST00000489719 CSNK1EP49674 416 aaKnown RBP18.25■□□□□ 0.51
ABCF3-217ENST00000489719 CLCN6P51797 869 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 CCDC15Q0P6D6 951 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 SEMA3BQ13214 749 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 SLC14A1Q13336 389 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 ZSCAN23Q3MJ62 389 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 FIGNQ5HY92 759 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 EFHC2Q5JST6 749 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 TBC1D3GQ6DHY5 549 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 TBC1D3CQ6IPX1 549 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 LINGO4Q6UY18 593 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 ZNF571Q7Z3V5 609 aaPredicted RBP18.25■□□□□ 0.51
ABCF3-217ENST00000489719 TBC1D3Q8IZP1 549 aaPredicted RBP18.25■□□□□ 0.51
ABCF3-217ENST00000489719 DEFB124Q8NES8 71 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 OR2I1PQ8NGU4 316 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 C1orf216Q8TAB5 229 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 PIP4K2CQ8TBX8 421 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 TBC1D31Q96DN5 1066 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 SYT11Q9BT88 431 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 OSGEPQ9NPF4 335 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 HPCAL4Q9UM19 191 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 CACNA1AO00555 2505 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 PLXND1Q9Y4D7 1925 aa18.25■□□□□ 0.51
ABCF3-217ENST00000489719 DNAH14Q0VDD8 3507 aa18.24■□□□□ 0.51
ABCF3-217ENST00000489719 A0A1B0GVT2 93 aa18.24■□□□□ 0.51
ABCF3-217ENST00000489719 UPK3BL1B0FP48 263 aa18.24■□□□□ 0.51
ABCF3-217ENST00000489719 UPK3BL2E5RIL1 263 aa18.24■□□□□ 0.51
ABCF3-217ENST00000489719 FAM72CH0Y354 149 aa18.24■□□□□ 0.51
ABCF3-217ENST00000489719 GIPC1O14908 333 aa18.24■□□□□ 0.51
ABCF3-217ENST00000489719 CCP110O43303 1012 aa18.24■□□□□ 0.51
ABCF3-217ENST00000489719 LRIG2O94898 1065 aa18.24■□□□□ 0.51
ABCF3-217ENST00000489719 SKILP12757 684 aa18.24■□□□□ 0.51
ABCF3-217ENST00000489719 L1CAMP32004 1257 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms