RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 LARP4BQ92615 738 aaKnown RBP15.53■□□□□ 0.08
UFD1-209ENST00000489406 ZNF516Q92618 1163 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 CCDC127Q96BQ5 260 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 BMFQ96LC9 184 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 HEXIM2Q96MH2 286 aaKnown RBP15.53■□□□□ 0.08
UFD1-209ENST00000489406 FGFBP2Q9BYJ0 223 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 CPEB1Q9BZB8 566 aaKnown RBP15.53■□□□□ 0.08
UFD1-209ENST00000489406 PRDM8Q9NQV8 689 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 IPO11Q9UI26 975 aaKnown RBP15.53■□□□□ 0.08
UFD1-209ENST00000489406 DAAM1Q9Y4D1 1078 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 DNHD1Q96M86 4753 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 SPTY2D1-AS1A0A0U1RR47 76 aa15.52■□□□□ 0.08
UFD1-209ENST00000489406 TTLL8A6PVC2 850 aa15.52■□□□□ 0.08
UFD1-209ENST00000489406 EFCAB7A8K855 629 aa15.52■□□□□ 0.08
UFD1-209ENST00000489406 ZNF891A8MT65 544 aaPredicted RBP15.52■□□□□ 0.08
UFD1-209ENST00000489406 STMND1H3BQB6 276 aa15.52■□□□□ 0.08
UFD1-209ENST00000489406 K7EM74 188 aa15.52■□□□□ 0.08
UFD1-209ENST00000489406 KIAA0391O15091 583 aaKnown RBP15.52■□□□□ 0.08
UFD1-209ENST00000489406 CNTN5O94779 1100 aa15.52■□□□□ 0.08
UFD1-209ENST00000489406 PRKAR1AP10644 381 aa15.52■□□□□ 0.08
UFD1-209ENST00000489406 STK19P49842 368 aaPredicted RBP15.52■□□□□ 0.08
UFD1-209ENST00000489406 ADKP55263 362 aaKnown RBP15.52■□□□□ 0.08
UFD1-209ENST00000489406 YWHAGP61981 247 aaKnown RBP eCLIP15.52■□□□□ 0.08
UFD1-209ENST00000489406 ECT2LQ008S8 904 aa15.52■□□□□ 0.08
UFD1-209ENST00000489406 FGL2Q14314 439 aa15.52■□□□□ 0.08
UFD1-209ENST00000489406 EIF2S3LQ2VIR3 472 aaKnown RBP15.52■□□□□ 0.08
UFD1-209ENST00000489406 ZNF699Q32M78 642 aa15.52■□□□□ 0.08
UFD1-209ENST00000489406 ZNF667Q5HYK9 610 aa15.52■□□□□ 0.08
UFD1-209ENST00000489406 MPP7Q5T2T1 576 aa15.52■□□□□ 0.08
UFD1-209ENST00000489406 PIK3R6Q5UE93 754 aa15.52■□□□□ 0.08
UFD1-209ENST00000489406 FAM46CQ5VWP2 391 aa15.52■□□□□ 0.08
UFD1-209ENST00000489406 ZNF557Q8N988 423 aaPredicted RBP15.52■□□□□ 0.08
UFD1-209ENST00000489406 CCDC74AQ96AQ1 378 aa15.52■□□□□ 0.08
UFD1-209ENST00000489406 CYFIP2Q96F07 1278 aa15.52■□□□□ 0.08
UFD1-209ENST00000489406 SPAG5Q96R06 1193 aa15.52■□□□□ 0.08
UFD1-209ENST00000489406 GULP1Q9UBP9 304 aa15.52■□□□□ 0.08
UFD1-209ENST00000489406 POM121BA6NF01 834 aa15.51■□□□□ 0.07
UFD1-209ENST00000489406 SLC26A4O43511 780 aa15.51■□□□□ 0.07
UFD1-209ENST00000489406 PHACTR2O75167 634 aa15.51■□□□□ 0.07
UFD1-209ENST00000489406 GCATO75600 419 aa15.51■□□□□ 0.07
UFD1-209ENST00000489406 NUMBP49757 651 aa15.51■□□□□ 0.07
UFD1-209ENST00000489406 NAA30Q147X3 362 aaPredicted RBP15.51■□□□□ 0.07
UFD1-209ENST00000489406 FSCBQ5H9T9 825 aa15.51■□□□□ 0.07
UFD1-209ENST00000489406 TMEM164Q5U3C3 297 aa15.51■□□□□ 0.07
UFD1-209ENST00000489406 ESRP1Q6NXG1 681 aaKnown RBP15.51■□□□□ 0.07
UFD1-209ENST00000489406 HORMAD1Q86X24 394 aa15.51■□□□□ 0.07
UFD1-209ENST00000489406 RBFAQ8N0V3 343 aa15.51■□□□□ 0.07
UFD1-209ENST00000489406 ARHGAP18Q8N392 663 aa15.51■□□□□ 0.07
UFD1-209ENST00000489406 CARNMT1Q8N4J0 409 aa15.51■□□□□ 0.07
UFD1-209ENST00000489406 CPT1CQ8TCG5 803 aa15.51■□□□□ 0.07
UFD1-209ENST00000489406 PDCD6IPQ8WUM4 868 aaKnown RBP15.51■□□□□ 0.07
UFD1-209ENST00000489406 APOBEC4Q8WW27 367 aaKnown RBP15.51■□□□□ 0.07
UFD1-209ENST00000489406 CMKLR1Q99788 373 aa15.51■□□□□ 0.07
UFD1-209ENST00000489406 GPR27Q9NS67 375 aa15.51■□□□□ 0.07
UFD1-209ENST00000489406 SFMBT1Q9UHJ3 866 aa15.51■□□□□ 0.07
UFD1-209ENST00000489406 HIVEP3Q5T1R4 2406 aa15.51■□□□□ 0.07
UFD1-209ENST00000489406 EPB41L2O43491 1005 aaKnown RBP15.5■□□□□ 0.07
UFD1-209ENST00000489406 DUX1O43812 170 aa15.5■□□□□ 0.07
UFD1-209ENST00000489406 ANXA6P08133 673 aa15.5■□□□□ 0.07
UFD1-209ENST00000489406 GAP43P17677 238 aa15.5■□□□□ 0.07
UFD1-209ENST00000489406 SEPT6Q14141 434 aa15.5■□□□□ 0.07
UFD1-209ENST00000489406 DEFB109BQ30KR1 87 aa15.5■□□□□ 0.07
UFD1-209ENST00000489406 FAM174AQ8TBP5 190 aa15.5■□□□□ 0.07
UFD1-209ENST00000489406 OR8D1Q8WZ84 308 aa15.5■□□□□ 0.07
UFD1-209ENST00000489406 TMEM159Q96B96 161 aa15.5■□□□□ 0.07
UFD1-209ENST00000489406 EPAS1Q99814 870 aa15.5■□□□□ 0.07
UFD1-209ENST00000489406 TCEAL2Q9H3H9 227 aaPredicted RBP15.5■□□□□ 0.07
UFD1-209ENST00000489406 LRRN3Q9H3W5 708 aa15.5■□□□□ 0.07
UFD1-209ENST00000489406 SPASTQ9UBP0 616 aa15.5■□□□□ 0.07
UFD1-209ENST00000489406 HBS1LQ9Y450 684 aaKnown RBP15.5■□□□□ 0.07
UFD1-209ENST00000489406 YY2O15391 372 aa15.49■□□□□ 0.07
UFD1-209ENST00000489406 LATS1O95835 1130 aa15.49■□□□□ 0.07
UFD1-209ENST00000489406 NNMTP40261 264 aa15.49■□□□□ 0.07
UFD1-209ENST00000489406 SNRNP35Q16560 246 aaKnown RBP15.49■□□□□ 0.07
UFD1-209ENST00000489406 PRRT3Q5FWE3 981 aa15.49■□□□□ 0.07
UFD1-209ENST00000489406 TPRG1LQ5T0D9 272 aa15.49■□□□□ 0.07
UFD1-209ENST00000489406 NEK5Q6P3R8 708 aa15.49■□□□□ 0.07
UFD1-209ENST00000489406 APCDD1Q8J025 514 aa15.49■□□□□ 0.07
UFD1-209ENST00000489406 GPBAR1Q8TDU6 330 aa15.49■□□□□ 0.07
UFD1-209ENST00000489406 MARVELD3Q96A59 401 aa15.49■□□□□ 0.07
UFD1-209ENST00000489406 AK8Q96MA6 479 aa15.49■□□□□ 0.07
UFD1-209ENST00000489406 VRTNQ9H8Y1 702 aa15.49■□□□□ 0.07
UFD1-209ENST00000489406 KIAA1586Q9HCI6 787 aa15.49■□□□□ 0.07
UFD1-209ENST00000489406 ZFR2Q9UPR6 939 aaKnown RBP15.49■□□□□ 0.07
UFD1-209ENST00000489406 HS3ST3A1Q9Y663 406 aa15.49■□□□□ 0.07
UFD1-209ENST00000489406 C1QTNF3-AMACRE9PGA6 284 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 LMO7DNF2Z398 122 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 SPINT1O43278 529 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 MSI1O43347 362 aaKnown RBP15.48■□□□□ 0.07
UFD1-209ENST00000489406 STX6O43752 255 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 DIAPH2O60879 1101 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 PCDH8O95206 1070 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 MOCS3O95396 460 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 LDLRP01130 860 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 ITGB7P26010 798 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 ZFP36L1Q07352 338 aaKnown RBP15.48■□□□□ 0.07
UFD1-209ENST00000489406 CDH18Q13634 790 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 ALCAMQ13740 583 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 PDE1CQ14123 709 aaPredicted RBP15.48■□□□□ 0.07
UFD1-209ENST00000489406 PSMD6Q15008 389 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms