RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 NOX5Q96PH1 765 aa11.91□□□□□ -0.5
HDAC6-233ENST00000489352 SPAG5Q96R06 1193 aa11.91□□□□□ -0.5
HDAC6-233ENST00000489352 EPAS1Q99814 870 aa11.91□□□□□ -0.5
HDAC6-233ENST00000489352 CBWD1Q9BRT8 395 aa11.91□□□□□ -0.5
HDAC6-233ENST00000489352 INTS2Q9H0H0 1204 aaKnown RBP11.91□□□□□ -0.5
HDAC6-233ENST00000489352 SMYD3Q9H7B4 428 aa11.91□□□□□ -0.5
HDAC6-233ENST00000489352 PNPLA8Q9NP80 782 aa11.91□□□□□ -0.5
HDAC6-233ENST00000489352 FOXD4L1Q9NU39 408 aa11.91□□□□□ -0.5
HDAC6-233ENST00000489352 ABCA2Q9BZC7 2435 aa11.91□□□□□ -0.5
HDAC6-233ENST00000489352 ETV5P41161 510 aa11.9□□□□□ -0.5
HDAC6-233ENST00000489352 UBA7P41226 1012 aa11.9□□□□□ -0.5
HDAC6-233ENST00000489352 MYL6P60660 151 aa11.9□□□□□ -0.5
HDAC6-233ENST00000489352 CNTN1Q12860 1018 aa11.9□□□□□ -0.5
HDAC6-233ENST00000489352 ZXDCQ2QGD7 858 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-233ENST00000489352 MPP7Q5T2T1 576 aa11.9□□□□□ -0.5
HDAC6-233ENST00000489352 PHF19Q5T6S3 580 aa11.9□□□□□ -0.5
HDAC6-233ENST00000489352 SCARA5Q6ZMJ2 495 aa11.9□□□□□ -0.5
HDAC6-233ENST00000489352 CLEC20AQ6ZU45 233 aa11.9□□□□□ -0.5
HDAC6-233ENST00000489352 CACNA2D3Q8IZS8 1091 aa11.9□□□□□ -0.5
HDAC6-233ENST00000489352 SDR16C5Q8N3Y7 309 aa11.9□□□□□ -0.5
HDAC6-233ENST00000489352 CARNMT1Q8N4J0 409 aa11.9□□□□□ -0.5
HDAC6-233ENST00000489352 TTC13Q8NBP0 860 aa11.9□□□□□ -0.5
HDAC6-233ENST00000489352 WFDC5Q8TCV5 224 aa11.9□□□□□ -0.5
HDAC6-233ENST00000489352 PDCD6IPQ8WUM4 868 aaKnown RBP11.9□□□□□ -0.5
HDAC6-233ENST00000489352 OR8D1Q8WZ84 308 aa11.9□□□□□ -0.5
HDAC6-233ENST00000489352 CCDC74AQ96AQ1 378 aa11.9□□□□□ -0.5
HDAC6-233ENST00000489352 KIAA1143Q96AT1 154 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-233ENST00000489352 B3GNT4Q9C0J1 378 aa11.9□□□□□ -0.5
HDAC6-233ENST00000489352 CDH19Q9H159 772 aa11.9□□□□□ -0.5
HDAC6-233ENST00000489352 TBC1D7Q9P0N9 293 aa11.9□□□□□ -0.5
HDAC6-233ENST00000489352 SLCO3A1Q9UIG8 710 aa11.9□□□□□ -0.5
HDAC6-233ENST00000489352 ITIH6Q6UXX5 1313 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 SPTY2D1-AS1A0A0U1RR47 76 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 NKX2-8O15522 239 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 STX6O43752 255 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 PCDH8O95206 1070 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 NR1D1P20393 614 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 KIF11P52732 1056 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 METAP1P53582 386 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 CDH18Q13634 790 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 FZD2Q14332 565 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 TRIP4Q15650 581 aaPredicted RBP11.89□□□□□ -0.51
HDAC6-233ENST00000489352 PRRT3Q5FWE3 981 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 ZNF667Q5HYK9 610 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 AGBL4Q5VU57 503 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 DIEXFQ68CQ4 756 aaKnown RBP11.89□□□□□ -0.51
HDAC6-233ENST00000489352 GCNT7Q6ZNI0 430 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 TMPRSS9Q7Z410 1059 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 ABI3BPQ7Z7G0 1075 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 HORMAD1Q86X24 394 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 CCDC13Q8IYE1 715 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 C12orf29Q8N999 325 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 FIBINQ8TAL6 211 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 RPL10LQ96L21 214 aaKnown RBP11.89□□□□□ -0.51
HDAC6-233ENST00000489352 C5orf34Q96MH7 638 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 LRRN3Q9H3W5 708 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 KIAA1586Q9HCI6 787 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 OLA1Q9NTK5 396 aaKnown RBP11.89□□□□□ -0.51
HDAC6-233ENST00000489352 MAP10Q9P2G4 905 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 APOBEC3BQ9UH17 382 aaKnown RBP11.89□□□□□ -0.51
HDAC6-233ENST00000489352 HS3ST3A1Q9Y663 406 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 CSMD2Q7Z408 3487 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 SPG11Q96JI7 2443 aa11.89□□□□□ -0.51
HDAC6-233ENST00000489352 SHANK1Q9Y566 2161 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 HHLA1C9JL84 531 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 IRAK2O43187 625 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 STAU1O95793 577 aaKnown RBP11.88□□□□□ -0.51
HDAC6-233ENST00000489352 LATS1O95835 1130 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 P4HA1P13674 534 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 CTSOP43234 321 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-233ENST00000489352 RABIFP47224 123 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 SGSHP51688 502 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 YWHAGP61981 247 aaKnown RBP eCLIP11.88□□□□□ -0.51
HDAC6-233ENST00000489352 MC1RQ01726 317 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 CDC20Q12834 499 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 C1orf61Q13536 156 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 PDE1CQ14123 709 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-233ENST00000489352 ZNF284Q2VY69 593 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 ZNF699Q32M78 642 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 ACCSLQ4AC99 568 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 PITRM1Q5JRX3 1037 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 TCTN3Q6NUS6 607 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 RFWD3Q6PCD5 774 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 CBWD2Q8IUF1 395 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 TP53INP2Q8IXH6 220 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 RNF139Q8WU17 664 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 RAD54LQ92698 747 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 CCDC127Q96BQ5 260 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 SLC45A3Q96JT2 553 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 EFHD1Q9BUP0 239 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 SLC29A3Q9BZD2 475 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 SLC13A1Q9BZW2 595 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 DNAI2Q9GZS0 605 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 GPN2Q9H9Y4 310 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-233ENST00000489352 DYRK4Q9NR20 520 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 SIRPGQ9P1W8 387 aa11.88□□□□□ -0.51
HDAC6-233ENST00000489352 HBS1LQ9Y450 684 aaKnown RBP11.88□□□□□ -0.51
HDAC6-233ENST00000489352 LMO7DNF2Z398 122 aa11.87□□□□□ -0.51
HDAC6-233ENST00000489352 M0QYT0 321 aa11.87□□□□□ -0.51
HDAC6-233ENST00000489352 SLC26A4O43511 780 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms