RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 CENPCQ03188 943 aa11.11□□□□□ -0.63
PTP4A2-206ENST00000489313 SULT2A1Q06520 285 aa11.11□□□□□ -0.63
PTP4A2-206ENST00000489313 KCNMA1Q12791 1236 aa11.11□□□□□ -0.63
PTP4A2-206ENST00000489313 DLG2Q15700 870 aa11.11□□□□□ -0.63
PTP4A2-206ENST00000489313 ARHGAP40Q5TG30 622 aa11.11□□□□□ -0.63
PTP4A2-206ENST00000489313 FAM46CQ5VWP2 391 aa11.11□□□□□ -0.63
PTP4A2-206ENST00000489313 CXorf57Q6NSI4 855 aaKnown RBP11.11□□□□□ -0.63
PTP4A2-206ENST00000489313 ARHGEF19Q8IW93 802 aa11.11□□□□□ -0.63
PTP4A2-206ENST00000489313 ZNF248Q8NDW4 579 aa11.11□□□□□ -0.63
PTP4A2-206ENST00000489313 OR52K2Q8NGK3 314 aa11.11□□□□□ -0.63
PTP4A2-206ENST00000489313 OR4C6Q8NH72 309 aa11.11□□□□□ -0.63
PTP4A2-206ENST00000489313 PRMT1Q99873 361 aaKnown RBP11.11□□□□□ -0.63
PTP4A2-206ENST00000489313 FZD3Q9NPG1 666 aa11.11□□□□□ -0.63
PTP4A2-206ENST00000489313 PPM1HQ9ULR3 514 aa11.11□□□□□ -0.63
PTP4A2-206ENST00000489313 ZDHHC9Q9Y397 364 aa11.11□□□□□ -0.63
PTP4A2-206ENST00000489313 PTPN13Q12923 2485 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 SYNJ2BP-COX16A0A087WUM0 186 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 A0A1W2PQ27 194 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 A0A1W2PQ64 194 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 E5RJQ4 531 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 C1QTNF3-AMACRE9PGA6 284 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 J3QKU1 62 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 ERVH48-1M5A8F1 160 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 ATP9BO43861 1147 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 OPA1O60313 960 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 RNGTTO60942 597 aaKnown RBP11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 USP12O75317 370 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 IGLV3-25P01717 112 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 CENPBP07199 599 aaPredicted RBP11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 ZNF18P17022 549 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 RPL34P49207 117 aaKnown RBP11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 IRAK1P51617 712 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 TAF5Q15542 800 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 KIF26BQ2KJY2 2108 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 HS1BP3Q53T59 392 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 ZNF658Q5TYW1 1059 aaPredicted RBP11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 CDCP2Q5VXM1 449 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 ATP6V0D2Q8N8Y2 350 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 TMEM145Q8NBT3 493 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 OR13H1Q8NG92 308 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 LMO3Q8TAP4 145 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 ERCC4Q92889 916 aaPredicted RBP11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 ALG14Q96F25 216 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 HIC2Q96JB3 615 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 CALN1Q9BXU9 219 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 SEMA4CQ9C0C4 833 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 OSBPL2Q9H1P3 480 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 POPDC2Q9HBU9 364 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 KLHL11Q9NVR0 708 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 RMND1Q9NWS8 449 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 COX16Q9P0S2 106 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 SLC25A13Q9UJS0 675 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 TRPM6Q9BX84 2022 aa11.1□□□□□ -0.63
PTP4A2-206ENST00000489313 TLN1Q9Y490 2541 aaKnown RBP11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 A0A1W2PQU0 124 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 TCAF2A6NFQ2 919 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 MCF2LO15068 1137 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 CSO75390 466 aaKnown RBP11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 GIMD1P0DJR0 217 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 CKMT1AP12532 417 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 KRT5P13647 590 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 GGCXP38435 758 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 PLK1P53350 603 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 TMPRSS3P57727 454 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 CLDN2P57739 230 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 LRRC63Q05C16 580 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 ZNF542PQ5EBM4 170 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 RABGAP1LQ5R372 815 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 PIP5KL1Q5T9C9 394 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 BROXQ5VW32 411 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 FBXL22Q6P050 247 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 BEND5Q7L4P6 421 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 KREMEN1Q96MU8 473 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 ZNF578Q96N58 590 aaPredicted RBP11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 RPRD1AQ96P16 312 aaPredicted RBP11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 NOX5Q96PH1 765 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 FEM1AQ9BSK4 669 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 SLC4A5Q9BY07 1137 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 FAM204AQ9H8W3 233 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 GDPD2Q9HCC8 539 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 METTL14Q9HCE5 456 aaKnown RBP11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 PREBQ9HCU5 417 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 SLC12A6Q9UHW9 1150 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 VPS28Q9UK41 221 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 RP1P56715 2156 aa11.09□□□□□ -0.63
PTP4A2-206ENST00000489313 PYCARD-AS1I3L0S3 204 aa11.08□□□□□ -0.64
PTP4A2-206ENST00000489313 RNF103O00237 685 aa11.08□□□□□ -0.64
PTP4A2-206ENST00000489313 KLK10O43240 276 aa11.08□□□□□ -0.64
PTP4A2-206ENST00000489313 PIAS2O75928 621 aa11.08□□□□□ -0.64
PTP4A2-206ENST00000489313 NEBLO76041 1014 aa11.08□□□□□ -0.64
PTP4A2-206ENST00000489313 MT-CO1P00395 513 aa11.08□□□□□ -0.64
PTP4A2-206ENST00000489313 CTSLP07711 333 aa11.08□□□□□ -0.64
PTP4A2-206ENST00000489313 ACADSBP45954 432 aa11.08□□□□□ -0.64
PTP4A2-206ENST00000489313 YWHAZP63104 245 aaKnown RBP11.08□□□□□ -0.64
PTP4A2-206ENST00000489313 EIF4EBP2Q13542 120 aaPredicted RBP11.08□□□□□ -0.64
PTP4A2-206ENST00000489313 LY6DQ14210 128 aa11.08□□□□□ -0.64
PTP4A2-206ENST00000489313 ZNF284Q2VY69 593 aa11.08□□□□□ -0.64
PTP4A2-206ENST00000489313 COBLL1Q53SF7 1204 aa11.08□□□□□ -0.64
PTP4A2-206ENST00000489313 TTC39BQ5VTQ0 682 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms