RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 ATP9BO43861 1147 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 CREB3O43889 395 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 PRPSAP2O60256 369 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 LRIG2O94898 1065 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 ADH1BP00325 375 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 EPHB2P29323 1055 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 RECQLP46063 649 aaPredicted RBP14.63□□□□□ -0.07
BRCA1-218ENST00000489037 CLCN6P51797 869 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 GNA12Q03113 381 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 SLC20A2Q08357 652 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 CST6Q15828 149 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 DUOXA1Q1HG43 343 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 CCDC122Q5T0U0 273 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 FAM46CQ5VWP2 391 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 ALKBH5Q6P6C2 394 aaKnown RBP14.63□□□□□ -0.07
BRCA1-218ENST00000489037 USP30Q70CQ3 517 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 ZNF354CQ86Y25 554 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 DNAAF5Q86Y56 855 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 VSTM4Q8IW00 320 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 STK40Q8N2I9 435 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 SH2D3CQ8N5H7 860 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 OR7D4Q8NG98 312 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 FNIP1Q8TF40 1166 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 PTPRN2Q92932 1015 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 TRIM5Q9C035 493 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 PABPC3Q9H361 631 aaKnown RBP14.63□□□□□ -0.07
BRCA1-218ENST00000489037 SMOC1Q9H4F8 434 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 TMEM248Q9NWD8 314 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 FBXL12Q9NXK8 326 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 DNAI1Q9UI46 699 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 VPS51Q9UID3 782 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 PILRBQ9UKJ0 227 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 HS3ST2Q9Y278 367 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 CHD5Q8TDI0 1954 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 A0A0D9SEW6 157 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 EIF3CLB5ME19 914 aaKnown RBP14.62□□□□□ -0.07
BRCA1-218ENST00000489037 C1QTNF3-AMACRE9PGA6 284 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 FAM72CH0Y354 149 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 BNIP3LO60238 219 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 SNAP91O60641 907 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 IL1BP01584 269 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 CFIP05156 583 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 C7P10643 843 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 C5AR1P21730 350 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 HNRNPH3P31942 346 aaKnown RBP14.62□□□□□ -0.07
BRCA1-218ENST00000489037 SLC8A1P32418 973 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 HTR7P34969 479 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 PSMD8P48556 350 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 GEMIN4P57678 1058 aaKnown RBP14.62□□□□□ -0.07
BRCA1-218ENST00000489037 OGDHQ02218 1023 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 ACAP1Q15027 740 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 TRIM61Q5EBN2 209 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 FAM72AQ5TYM5 149 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 MANEALQ5VSG8 457 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 FAM72DQ6L9T8 149 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 FAM72BQ86X60 149 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 SLC41A1Q8IVJ1 513 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 FRS2Q8WU20 508 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 RMDN1Q96DB5 314 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 FAM129BQ96TA1 746 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 PSMB7Q99436 277 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 EIF3CQ99613 913 aaKnown RBP14.62□□□□□ -0.07
BRCA1-218ENST00000489037 RTKNQ9BST9 563 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 MAGEH1Q9H213 219 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 PCSK1NQ9UHG2 260 aa14.62□□□□□ -0.07
BRCA1-218ENST00000489037 EVLQ9UI08 416 aaPredicted RBP14.62□□□□□ -0.07
BRCA1-218ENST00000489037 ATXN2Q99700 1313 aaKnown RBP14.62□□□□□ -0.07
BRCA1-218ENST00000489037 CFAP54Q96N23 3096 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 ADAMTS9Q9P2N4 1935 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 A0A087X0T9 212 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 METTL12A8MUP2 240 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 ALOX15BO15296 676 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 MID1O15344 667 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 FGF10O15520 208 aaPredicted RBP14.61□□□□□ -0.07
BRCA1-218ENST00000489037 DAPK3O43293 454 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 RAMP2O60895 175 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 RNASEH2AO75792 299 aaKnown RBP14.61□□□□□ -0.07
BRCA1-218ENST00000489037 SEMA4FO95754 770 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 FAM228BP0C875 321 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 SRCP12931 536 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 EIF4A3P38919 411 aaKnown RBP14.61□□□□□ -0.07
BRCA1-218ENST00000489037 ATXN3P54252 364 aaPredicted RBP14.61□□□□□ -0.07
BRCA1-218ENST00000489037 TPI1P60174 286 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 CCDC15Q0P6D6 951 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 POLD3Q15054 466 aaPredicted RBP14.61□□□□□ -0.07
BRCA1-218ENST00000489037 ERMARDQ5T6L9 678 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 DCAF12L1Q5VU92 463 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 TCEAL6Q6IPX3 200 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 PYROXD2Q8N2H3 581 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 HDDC3Q8N4P3 179 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 SNX19Q92543 992 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 TCEAL3Q969E4 200 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 EDEM2Q9BV94 578 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 THAP2Q9H0W7 228 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 MIR1-1HGQ9H1L0 117 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 DHX35Q9H5Z1 703 aaKnown RBP14.61□□□□□ -0.07
BRCA1-218ENST00000489037 ARHGAP20Q9P2F6 1191 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 SLC6A14Q9UN76 642 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 AP4E1Q9UPM8 1137 aa14.61□□□□□ -0.07
BRCA1-218ENST00000489037 CACNA1EQ15878 2313 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms