RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 HERC3Q15034 1050 aa19.88■□□□□ 0.77
HMG20B-213ENST00000488973 SMAD1Q15797 465 aaKnown RBP19.88■□□□□ 0.77
HMG20B-213ENST00000488973 CELF3Q5SZQ8 465 aaKnown RBP19.88■□□□□ 0.77
HMG20B-213ENST00000488973 STRADAQ7RTN6 431 aa19.88■□□□□ 0.77
HMG20B-213ENST00000488973 ZFP28Q8NHY6 868 aa19.88■□□□□ 0.77
HMG20B-213ENST00000488973 CNBD2Q96M20 576 aa19.88■□□□□ 0.77
HMG20B-213ENST00000488973 MRPL45Q9BRJ2 306 aaKnown RBP19.88■□□□□ 0.77
HMG20B-213ENST00000488973 HSFX1Q9UBD0 423 aa19.88■□□□□ 0.77
HMG20B-213ENST00000488973 PCDHGB4Q9UN71 923 aa19.88■□□□□ 0.77
HMG20B-213ENST00000488973 GNEQ9Y223 722 aaKnown RBP19.88■□□□□ 0.77
HMG20B-213ENST00000488973 PCDHGB5Q9Y5G0 923 aa19.88■□□□□ 0.77
HMG20B-213ENST00000488973 PPP2R3BQ9Y5P8 575 aa19.88■□□□□ 0.77
HMG20B-213ENST00000488973 HBP1O60381 514 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 APOA4P06727 396 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 FAM58BPP0C7Q3 252 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 CD1EP15812 388 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 LSM12Q3MHD2 195 aaKnown RBP19.87■□□□□ 0.77
HMG20B-213ENST00000488973 PPM1LQ5SGD2 360 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 SEL1L3Q68CR1 1132 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.87■□□□□ 0.77
HMG20B-213ENST00000488973 URGCPQ8TCY9 931 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 CLEC4CQ8WTT0 213 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 GRIP2Q9C0E4 1043 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 DRC3Q9H069 523 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 ZNF385DQ9H6B1 395 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 COPS7BQ9H9Q2 264 aaPredicted RBP19.87■□□□□ 0.77
HMG20B-213ENST00000488973 GOLGA8QA0A0J9YX86 632 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 PRSS51A0A1B0GVH4 220 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 GOLGA8OA6NCC3 632 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 GOLGA8NF8WBI6 632 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 PPARGP37231 505 aaPredicted RBP19.87■□□□□ 0.77
HMG20B-213ENST00000488973 RPL14P50914 215 aaKnown RBP19.87■□□□□ 0.77
HMG20B-213ENST00000488973 IFRD2Q12894 506 aaPredicted RBP19.87■□□□□ 0.77
HMG20B-213ENST00000488973 PDK1Q15118 436 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 ADRM1Q16186 407 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 SOWAHAQ2M3V2 549 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 MYLK3Q32MK0 819 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 TMEM135Q86UB9 458 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 RIOX2Q8IUF8 465 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 LILRA2Q8N149 483 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 ZNF567Q8N184 647 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 PYROXD2Q8N2H3 581 aa19.87■□□□□ 0.77
HMG20B-213ENST00000488973 SENP6Q9GZR1 1112 aaPredicted RBP19.87■□□□□ 0.77
HMG20B-213ENST00000488973 WDR55Q9H6Y2 383 aaPredicted RBP19.87■□□□□ 0.77
HMG20B-213ENST00000488973 CNOT11Q9UKZ1 510 aaKnown RBP19.87■□□□□ 0.77
HMG20B-213ENST00000488973 CCDC160A6NGH7 325 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 HNRNPCP07910 306 aaKnown RBP eCLIP19.86■□□□□ 0.77
HMG20B-213ENST00000488973 ME2P23368 584 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 CD97P48960 835 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 PRKAA2P54646 552 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 IRF9Q00978 393 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 ARHGAP17Q68EM7 881 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 LBX2Q6XYB7 198 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 IFNLR1Q8IU57 520 aaPredicted RBP19.86■□□□□ 0.77
HMG20B-213ENST00000488973 PSTKQ8IV42 348 aaKnown RBP19.86■□□□□ 0.77
HMG20B-213ENST00000488973 SLC15A3Q8IY34 581 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 RDH11Q8TC12 318 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 AGR3Q8TD06 166 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 TRPM4Q8TD43 1214 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 ZNF669Q96BR6 464 aaPredicted RBP19.86■□□□□ 0.77
HMG20B-213ENST00000488973 ATXN7L3BQ96GX2 97 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 CPB2Q96IY4 423 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 SMARCAD1Q9H4L7 1026 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 TIMMDC1Q9NPL8 285 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 APPL1Q9UKG1 709 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 FZD10Q9ULW2 581 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 TIMM44O43615 452 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 TADA2AO75478 443 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 BCAS2O75934 225 aaPredicted RBP19.86■□□□□ 0.77
HMG20B-213ENST00000488973 LTFP02788 710 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 C2P06681 752 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 MPSTP25325 297 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 NR1H2P55055 460 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 CEACAM7Q14002 265 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 RFTN1Q14699 578 aaPredicted RBP19.86■□□□□ 0.77
HMG20B-213ENST00000488973 BHLHE22Q8NFJ8 381 aaPredicted RBP19.86■□□□□ 0.77
HMG20B-213ENST00000488973 RCN3Q96D15 328 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 PRPF18Q99633 342 aaKnown RBP19.86■□□□□ 0.77
HMG20B-213ENST00000488973 CEP41Q9BYV8 373 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 NACA2Q9H009 215 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.86■□□□□ 0.77
HMG20B-213ENST00000488973 THEGQ9P2T0 379 aa19.86■□□□□ 0.77
HMG20B-213ENST00000488973 ATP6V1B1P15313 513 aa19.85■□□□□ 0.77
HMG20B-213ENST00000488973 ARF4P18085 180 aaPredicted RBP19.85■□□□□ 0.77
HMG20B-213ENST00000488973 RPL34P49207 117 aaKnown RBP19.85■□□□□ 0.77
HMG20B-213ENST00000488973 MS4A2Q01362 244 aa19.85■□□□□ 0.77
HMG20B-213ENST00000488973 KLC3Q6P597 504 aa19.85■□□□□ 0.77
HMG20B-213ENST00000488973 OR52K1Q8NGK4 314 aa19.85■□□□□ 0.77
HMG20B-213ENST00000488973 CATSPER2Q96P56 530 aa19.85■□□□□ 0.77
HMG20B-213ENST00000488973 WDR41Q9HAD4 459 aa19.85■□□□□ 0.77
HMG20B-213ENST00000488973 TUBA8Q9NY65 449 aaPredicted RBP19.85■□□□□ 0.77
HMG20B-213ENST00000488973 SEPT10Q9P0V9 454 aa19.85■□□□□ 0.77
HMG20B-213ENST00000488973 VTI1BQ9UEU0 232 aa19.85■□□□□ 0.77
HMG20B-213ENST00000488973 FZD1Q9UP38 647 aa19.85■□□□□ 0.77
HMG20B-213ENST00000488973 NME7Q9Y5B8 376 aa19.85■□□□□ 0.77
HMG20B-213ENST00000488973 SNX9Q9Y5X1 595 aa19.85■□□□□ 0.77
HMG20B-213ENST00000488973 SLCO1B7G3V0H7 640 aa19.85■□□□□ 0.77
HMG20B-213ENST00000488973 NEMP1O14524 444 aa19.85■□□□□ 0.77
HMG20B-213ENST00000488973 CHRNGP07510 517 aa19.85■□□□□ 0.77
HMG20B-213ENST00000488973 EPHA3P29320 983 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms