RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 COX16Q9P0S2 106 aa6.78□□□□□ -1.32
HDLBP-243ENST00000488923 PRKAG3Q9UGI9 489 aa6.78□□□□□ -1.32
HDLBP-243ENST00000488923 DCDC2Q9UHG0 476 aa6.78□□□□□ -1.32
HDLBP-243ENST00000488923 MID2Q9UJV3 735 aa6.78□□□□□ -1.32
HDLBP-243ENST00000488923 GRID1Q9ULK0 1009 aa6.78□□□□□ -1.32
HDLBP-243ENST00000488923 PHTF1Q9UMS5 762 aa6.78□□□□□ -1.32
HDLBP-243ENST00000488923 TLR6Q9Y2C9 796 aa6.78□□□□□ -1.32
HDLBP-243ENST00000488923 CAPN7Q9Y6W3 813 aa6.78□□□□□ -1.32
HDLBP-243ENST00000488923 THSD7BQ9C0I4 1608 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 FAM237BA0A1B0GVD1 139 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 A0A1W2PPM1 405 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 FAM92AA1XBS5 289 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 ARHGAP42A6NI28 874 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 TRIM49D1C9J1S8 452 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 I3L4J1 428 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 TNFRSF10BO14763 440 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 CACNG3O60359 315 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 FKTNO75072 461 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 AVILO75366 819 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 NEBLO76041 1014 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 USP1O94782 785 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 LRIG2O94898 1065 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 MAP3K6O95382 1288 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 C1QAP02745 245 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 ALDH2P05091 517 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 INHAP05111 366 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 DHRS4L1P0CG22 281 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 PAMP19021 973 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 YY1P25490 414 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 PTPN3P26045 913 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 PSMB4P28070 264 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 GRK4P32298 578 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 SPRP35270 261 aaPredicted RBP6.77□□□□□ -1.33
HDLBP-243ENST00000488923 GP5P40197 560 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 SCTRP47872 440 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 POLD2P49005 469 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 NEK3P51956 506 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 NDST2P52849 883 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 GEMP55040 296 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 PITX1P78337 314 aaPredicted RBP6.77□□□□□ -1.33
HDLBP-243ENST00000488923 RELBQ01201 579 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 SLC20A2Q08357 652 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 CDH17Q12864 832 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 MRPL58Q14197 206 aaKnown RBP6.77□□□□□ -1.33
HDLBP-243ENST00000488923 CRYMQ14894 314 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 ZKSCAN8Q15776 578 aaPredicted RBP6.77□□□□□ -1.33
HDLBP-243ENST00000488923 CTXN3Q4LDR2 81 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 PAN2Q504Q3 1202 aaKnown RBP6.77□□□□□ -1.33
HDLBP-243ENST00000488923 CD300LGQ6UXG3 332 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 ANKS3Q6ZW76 656 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 SCN4BQ8IWT1 228 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 ZNF276Q8N554 614 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 ATPAF2Q8N5M1 289 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 DNAAF3Q8N9W5 541 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.77□□□□□ -1.33
HDLBP-243ENST00000488923 CD99L2Q8TCZ2 262 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 TCP10LQ8TDR4 215 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 NSMCE1Q8WV22 266 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 NDRG1Q92597 394 aaKnown RBP6.77□□□□□ -1.33
HDLBP-243ENST00000488923 EDEM1Q92611 657 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 ZNF75CPQ92670 426 aaPredicted RBP6.77□□□□□ -1.33
HDLBP-243ENST00000488923 MRRFQ96E11 262 aaKnown RBP6.77□□□□□ -1.33
HDLBP-243ENST00000488923 CCDC97Q96F63 343 aaPredicted RBP6.77□□□□□ -1.33
HDLBP-243ENST00000488923 SPATA17Q96L03 361 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 ZIC5Q96T25 663 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 MANSC1Q9H8J5 431 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 ENTPD7Q9NQZ7 604 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 TLR8Q9NR97 1041 aaKnown RBP6.77□□□□□ -1.33
HDLBP-243ENST00000488923 TXLNGQ9NUQ3 528 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 SAGE1Q9NXZ1 904 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 IL37Q9NZH6 218 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 SEPT10Q9P0V9 454 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 ZFATQ9P243 1243 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 PPARGC1AQ9UBK2 798 aaKnown RBP6.77□□□□□ -1.33
HDLBP-243ENST00000488923 LRFN2Q9ULH4 789 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 VANGL2Q9ULK5 521 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 SLC12A4Q9UP95 1085 aa6.77□□□□□ -1.33
HDLBP-243ENST00000488923 COL4A4P53420 1690 aaPredicted RBP6.77□□□□□ -1.33
HDLBP-243ENST00000488923 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.76□□□□□ -1.33
HDLBP-243ENST00000488923 FAM72CH0Y354 149 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 C2CD2LO14523 706 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 MATN3O15232 486 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 TIMM44O43615 452 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 H2AFYO75367 372 aaKnown RBP6.76□□□□□ -1.33
HDLBP-243ENST00000488923 PAGE1O75459 146 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 DDHD2O94830 711 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 MPOP05164 745 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 APOA4P06727 396 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 CCNB1P14635 433 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 RHOQP17081 205 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 FGFR3P22607 806 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 MGAT1P26572 445 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 FOXN2P32314 431 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 ETV4P43268 484 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 SERPINB8P50452 374 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 CDK7P50613 346 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 CACNA2D1P54289 1103 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 NRLP54845 237 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 CSE1LP55060 971 aaKnown RBP6.76□□□□□ -1.33
HDLBP-243ENST00000488923 MLLT6P55198 1093 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms