RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 CDK5RAP3Q96JB5 506 aa12.06□□□□□ -0.48
TRIM56-204ENST00000487252 GFM1Q96RP9 751 aaKnown RBP12.06□□□□□ -0.48
TRIM56-204ENST00000487252 CDH19Q9H159 772 aa12.06□□□□□ -0.48
TRIM56-204ENST00000487252 SMYD3Q9H7B4 428 aa12.06□□□□□ -0.48
TRIM56-204ENST00000487252 PRDM8Q9NQV8 689 aa12.06□□□□□ -0.48
TRIM56-204ENST00000487252 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.06□□□□□ -0.48
TRIM56-204ENST00000487252 SLCO3A1Q9UIG8 710 aa12.06□□□□□ -0.48
TRIM56-204ENST00000487252 RABGEF1Q9UJ41 708 aa12.06□□□□□ -0.48
TRIM56-204ENST00000487252 TP53TG5Q9Y2B4 290 aa12.06□□□□□ -0.48
TRIM56-204ENST00000487252 CCDC168Q8NDH2 2452 aa12.06□□□□□ -0.48
TRIM56-204ENST00000487252 SVILO95425 2214 aa12.06□□□□□ -0.48
TRIM56-204ENST00000487252 UNC13CQ8NB66 2214 aa12.06□□□□□ -0.48
TRIM56-204ENST00000487252 ZNF891A8MT65 544 aaPredicted RBP12.05□□□□□ -0.48
TRIM56-204ENST00000487252 STMND1H3BQB6 276 aa12.05□□□□□ -0.48
TRIM56-204ENST00000487252 K7EM74 188 aa12.05□□□□□ -0.48
TRIM56-204ENST00000487252 KIAA0391O15091 583 aaKnown RBP12.05□□□□□ -0.48
TRIM56-204ENST00000487252 SLFN14P0C7P3 912 aa12.05□□□□□ -0.48
TRIM56-204ENST00000487252 FAM200BP0CF97 657 aa12.05□□□□□ -0.48
TRIM56-204ENST00000487252 HNRNPA2B1P22626 353 aaKnown RBP12.05□□□□□ -0.48
TRIM56-204ENST00000487252 ATICP31939 592 aa12.05□□□□□ -0.48
TRIM56-204ENST00000487252 ARSDP51689 593 aa12.05□□□□□ -0.48
TRIM56-204ENST00000487252 CNTN1Q12860 1018 aa12.05□□□□□ -0.48
TRIM56-204ENST00000487252 MCM6Q14566 821 aa12.05□□□□□ -0.48
TRIM56-204ENST00000487252 NEK5Q6P3R8 708 aa12.05□□□□□ -0.48
TRIM56-204ENST00000487252 Q6ZSR6 202 aa12.05□□□□□ -0.48
TRIM56-204ENST00000487252 SV2AQ7L0J3 742 aa12.05□□□□□ -0.48
TRIM56-204ENST00000487252 CBWD2Q8IUF1 395 aa12.05□□□□□ -0.48
TRIM56-204ENST00000487252 C12orf29Q8N999 325 aa12.05□□□□□ -0.48
TRIM56-204ENST00000487252 TCTN2Q96GX1 697 aa12.05□□□□□ -0.48
TRIM56-204ENST00000487252 BMFQ96LC9 184 aa12.05□□□□□ -0.48
TRIM56-204ENST00000487252 IL12RB2Q99665 862 aa12.05□□□□□ -0.48
TRIM56-204ENST00000487252 MYOCQ99972 504 aa12.05□□□□□ -0.48
TRIM56-204ENST00000487252 PCIF1Q9H4Z3 704 aa12.05□□□□□ -0.48
TRIM56-204ENST00000487252 FZD3Q9NPG1 666 aa12.05□□□□□ -0.48
TRIM56-204ENST00000487252 SARDHQ9UL12 918 aa12.05□□□□□ -0.48
TRIM56-204ENST00000487252 STRIP2Q9ULQ0 834 aa12.05□□□□□ -0.48
TRIM56-204ENST00000487252 PADI4Q9UM07 663 aa12.05□□□□□ -0.48
TRIM56-204ENST00000487252 ANKHD1Q8IWZ3 2542 aaKnown RBP12.05□□□□□ -0.48
TRIM56-204ENST00000487252 TACC2O95359 2948 aa12.04□□□□□ -0.48
TRIM56-204ENST00000487252 ZNF233A6NK53 670 aa12.04□□□□□ -0.48
TRIM56-204ENST00000487252 A6NNZ2 444 aa12.04□□□□□ -0.48
TRIM56-204ENST00000487252 H3BM21 787 aa12.04□□□□□ -0.48
TRIM56-204ENST00000487252 GADD45BO75293 160 aaPredicted RBP12.04□□□□□ -0.48
TRIM56-204ENST00000487252 KRT18P05783 430 aaKnown RBP12.04□□□□□ -0.48
TRIM56-204ENST00000487252 AKT2P31751 481 aa12.04□□□□□ -0.48
TRIM56-204ENST00000487252 CTSOP43234 321 aaPredicted RBP12.04□□□□□ -0.48
TRIM56-204ENST00000487252 CLDN2P57739 230 aa12.04□□□□□ -0.48
TRIM56-204ENST00000487252 MYL6P60660 151 aa12.04□□□□□ -0.48
TRIM56-204ENST00000487252 PIK3R6Q5UE93 754 aa12.04□□□□□ -0.48
TRIM56-204ENST00000487252 NUGGCQ68CJ6 796 aa12.04□□□□□ -0.48
TRIM56-204ENST00000487252 TCTN3Q6NUS6 607 aa12.04□□□□□ -0.48
TRIM56-204ENST00000487252 PARGQ86W56 976 aa12.04□□□□□ -0.48
TRIM56-204ENST00000487252 TEX19Q8NA77 164 aa12.04□□□□□ -0.48
TRIM56-204ENST00000487252 FBXO18Q8NFZ0 1043 aa12.04□□□□□ -0.48
TRIM56-204ENST00000487252 APOBEC4Q8WW27 367 aaKnown RBP12.04□□□□□ -0.48
TRIM56-204ENST00000487252 JPH3Q8WXH2 748 aaPredicted RBP12.04□□□□□ -0.48
TRIM56-204ENST00000487252 RAD54LQ92698 747 aa12.04□□□□□ -0.48
TRIM56-204ENST00000487252 GLMNQ92990 594 aa12.04□□□□□ -0.48
TRIM56-204ENST00000487252 SYAP1Q96A49 352 aaPredicted RBP12.04□□□□□ -0.48
TRIM56-204ENST00000487252 SLC45A3Q96JT2 553 aa12.04□□□□□ -0.48
TRIM56-204ENST00000487252 PPP1R13BQ96KQ4 1090 aa12.04□□□□□ -0.48
TRIM56-204ENST00000487252 SPAG5Q96R06 1193 aa12.04□□□□□ -0.48
TRIM56-204ENST00000487252 PPP1R9BQ96SB3 815 aa12.04□□□□□ -0.48
TRIM56-204ENST00000487252 CGRRF1Q99675 332 aa12.04□□□□□ -0.48
TRIM56-204ENST00000487252 SDCBP2Q9H190 292 aa12.04□□□□□ -0.48
TRIM56-204ENST00000487252 HS3ST3A1Q9Y663 406 aa12.04□□□□□ -0.48
TRIM56-204ENST00000487252 A0A1W2PQU0 124 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 LMO7DNF2Z398 122 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 CAPN5O15484 640 aaPredicted RBP12.03□□□□□ -0.48
TRIM56-204ENST00000487252 NKX2-8O15522 239 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 GCATO75600 419 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 NR1D1P20393 614 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 ATP1A2P50993 1020 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 CASP5P51878 434 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 UBE2HP62256 183 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 CCL7P80098 99 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 PIP5KL1Q5T9C9 394 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 OR6B2Q6IFH4 312 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 KYAT3Q6YP21 454 aaKnown RBP12.03□□□□□ -0.48
TRIM56-204ENST00000487252 TMPRSS9Q7Z410 1059 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 HORMAD1Q86X24 394 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 EFCAB3Q8N7B9 438 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 CPT1CQ8TCG5 803 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 LMX1AQ8TE12 382 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 C8orf76Q96K31 380 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 TBATAQ96M53 351 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 CMKLR1Q99788 373 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 SYNDIG1Q9H7V2 258 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 CASS4Q9NQ75 786 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 HMGXB4Q9UGU5 601 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 ERRFI1Q9UJM3 462 aaPredicted RBP12.03□□□□□ -0.48
TRIM56-204ENST00000487252 PPM1HQ9ULR3 514 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 HBS1LQ9Y450 684 aaKnown RBP12.03□□□□□ -0.48
TRIM56-204ENST00000487252 PCDHB13Q9Y5F0 798 aa12.03□□□□□ -0.48
TRIM56-204ENST00000487252 POM121BA6NF01 834 aa12.02□□□□□ -0.49
TRIM56-204ENST00000487252 HNRNPRO43390 633 aaKnown RBP12.02□□□□□ -0.49
TRIM56-204ENST00000487252 TBL1XO60907 577 aa12.02□□□□□ -0.49
TRIM56-204ENST00000487252 RPLP0P05388 317 aaKnown RBP12.02□□□□□ -0.49
TRIM56-204ENST00000487252 VAV1P15498 845 aa12.02□□□□□ -0.49
TRIM56-204ENST00000487252 JUNDP17535 347 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms