RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 OR14C36Q8NHC7 312 aa19.58■□□□□ 0.72
CLIP2-206ENST00000487091 SLC30A5Q8TAD4 765 aa19.58■□□□□ 0.72
CLIP2-206ENST00000487091 RXFP2Q8WXD0 754 aa19.58■□□□□ 0.72
CLIP2-206ENST00000487091 CAMK1GQ96NX5 476 aa19.58■□□□□ 0.72
CLIP2-206ENST00000487091 C11orf70Q9BRQ4 267 aa19.58■□□□□ 0.72
CLIP2-206ENST00000487091 KDM4CQ9H3R0 1056 aa19.58■□□□□ 0.72
CLIP2-206ENST00000487091 MPP6Q9NZW5 540 aa19.58■□□□□ 0.72
CLIP2-206ENST00000487091 PPM1HQ9ULR3 514 aa19.58■□□□□ 0.72
CLIP2-206ENST00000487091 FNDC3AQ9Y2H6 1198 aaKnown RBP19.58■□□□□ 0.72
CLIP2-206ENST00000487091 PCDHB9Q9Y5E1 797 aa19.58■□□□□ 0.72
CLIP2-206ENST00000487091 SNX11Q9Y5W9 270 aa19.58■□□□□ 0.72
CLIP2-206ENST00000487091 C1QTNF3-AMACRE9PGA6 284 aa19.57■□□□□ 0.72
CLIP2-206ENST00000487091 VILLO15195 856 aa19.57■□□□□ 0.72
CLIP2-206ENST00000487091 SLC7A4O43246 635 aa19.57■□□□□ 0.72
CLIP2-206ENST00000487091 SRCP12931 536 aa19.57■□□□□ 0.72
CLIP2-206ENST00000487091 OR1E1P30953 314 aa19.57■□□□□ 0.72
CLIP2-206ENST00000487091 SDC4P31431 198 aa19.57■□□□□ 0.72
CLIP2-206ENST00000487091 NSFP46459 744 aaKnown RBP19.57■□□□□ 0.72
CLIP2-206ENST00000487091 ATP11AP98196 1134 aa19.57■□□□□ 0.72
CLIP2-206ENST00000487091 TYRO3Q06418 890 aa19.57■□□□□ 0.72
CLIP2-206ENST00000487091 PTP4A2Q12974 167 aa19.57■□□□□ 0.72
CLIP2-206ENST00000487091 ZNF423Q2M1K9 1284 aa19.57■□□□□ 0.72
CLIP2-206ENST00000487091 CCDC14Q49A88 953 aa19.57■□□□□ 0.72
CLIP2-206ENST00000487091 STRADAQ7RTN6 431 aa19.57■□□□□ 0.72
CLIP2-206ENST00000487091 PHF13Q86YI8 300 aaPredicted RBP19.57■□□□□ 0.72
CLIP2-206ENST00000487091 PCDHB18PQ96TA0 734 aa19.57■□□□□ 0.72
CLIP2-206ENST00000487091 NAT10Q9H0A0 1025 aaKnown RBP19.57■□□□□ 0.72
CLIP2-206ENST00000487091 PPARGC1AQ9UBK2 798 aaKnown RBP19.57■□□□□ 0.72
CLIP2-206ENST00000487091 ZNF212Q9UDV6 495 aa19.57■□□□□ 0.72
CLIP2-206ENST00000487091 VPS51Q9UID3 782 aa19.57■□□□□ 0.72
CLIP2-206ENST00000487091 FARP1Q9Y4F1 1045 aaPredicted RBP19.57■□□□□ 0.72
CLIP2-206ENST00000487091 ILVBLA1L0T0 632 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 C2CD4BA6NLJ0 364 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 DFNA5O60443 496 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 SNAP91O60641 907 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 SRGAP2O75044 1071 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 CBFA2T3O75081 653 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 MT-CO1P00395 513 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 ADRA1BP35368 520 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 CTSKP43235 329 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 PTPN9P43378 593 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 CLCN6P51797 869 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 NRG1Q02297 640 aaPredicted RBP19.56■□□□□ 0.72
CLIP2-206ENST00000487091 SUZ12Q15022 739 aaKnown RBP19.56■□□□□ 0.72
CLIP2-206ENST00000487091 CLEC16AQ2KHT3 1053 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 ARL13BQ3SXY8 428 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.56■□□□□ 0.72
CLIP2-206ENST00000487091 Q6ZVU0 165 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 TFAP2DQ7Z6R9 452 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 ADAT2Q7Z6V5 191 aaKnown RBP19.56■□□□□ 0.72
CLIP2-206ENST00000487091 GLRX5Q86SX6 157 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 AOPEPQ8N6M6 819 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 ATP11CQ8NB49 1132 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 PIP4K2CQ8TBX8 421 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 SKA1Q96BD8 255 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 CCDC114Q96M63 670 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 SCNM1Q9BWG6 230 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 ACE2Q9BYF1 805 aaPredicted RBP19.56■□□□□ 0.72
CLIP2-206ENST00000487091 ZYG11BQ9C0D3 744 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 RETREG1Q9H6L5 497 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 EBF2Q9HAK2 575 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 ADAM22Q9P0K1 906 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 TMEM63CQ9P1W3 806 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 PCOLCE2Q9UKZ9 415 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 SARDHQ9UL12 918 aa19.56■□□□□ 0.72
CLIP2-206ENST00000487091 A0A0D9SEW6 157 aa19.55■□□□□ 0.72
CLIP2-206ENST00000487091 FLRT2O43155 660 aa19.55■□□□□ 0.72
CLIP2-206ENST00000487091 PLXNA2O75051 1894 aa19.55■□□□□ 0.72
CLIP2-206ENST00000487091 TOP3BO95985 862 aaKnown RBP19.55■□□□□ 0.72
CLIP2-206ENST00000487091 CALB1P05937 261 aa19.55■□□□□ 0.72
CLIP2-206ENST00000487091 KRT3P12035 628 aa19.55■□□□□ 0.72
CLIP2-206ENST00000487091 ST3GAL2Q16842 350 aa19.55■□□□□ 0.72
CLIP2-206ENST00000487091 C15orf59Q2T9L4 293 aaPredicted RBP19.55■□□□□ 0.72
CLIP2-206ENST00000487091 PHLDB2Q86SQ0 1253 aa19.55■□□□□ 0.72
CLIP2-206ENST00000487091 JOSD2Q8TAC2 188 aa19.55■□□□□ 0.72
CLIP2-206ENST00000487091 TMEM131Q92545 1883 aa19.55■□□□□ 0.72
CLIP2-206ENST00000487091 CENPIQ92674 756 aaPredicted RBP19.55■□□□□ 0.72
CLIP2-206ENST00000487091 BPIFA3Q9BQP9 254 aa19.55■□□□□ 0.72
CLIP2-206ENST00000487091 OSBPL2Q9H1P3 480 aa19.55■□□□□ 0.72
CLIP2-206ENST00000487091 NEUROG3Q9Y4Z2 214 aa19.55■□□□□ 0.72
CLIP2-206ENST00000487091 TBC1D3DA0A087WVF3 549 aa19.54■□□□□ 0.72
CLIP2-206ENST00000487091 TBC1D3IA0A087WXS9 549 aa19.54■□□□□ 0.72
CLIP2-206ENST00000487091 TBC1D3EA0A087X179 549 aa19.54■□□□□ 0.72
CLIP2-206ENST00000487091 TBC1D3KA0A087X1G2 549 aa19.54■□□□□ 0.72
CLIP2-206ENST00000487091 TBC1D3FA6NER0 549 aaPredicted RBP19.54■□□□□ 0.72
CLIP2-206ENST00000487091 TBC1D3LB9A6J9 549 aa19.54■□□□□ 0.72
CLIP2-206ENST00000487091 LATO43561 262 aa19.54■□□□□ 0.72
CLIP2-206ENST00000487091 PLRG1O43660 514 aaKnown RBP19.54■□□□□ 0.72
CLIP2-206ENST00000487091 CCDC172P0C7W6 258 aa19.54■□□□□ 0.72
CLIP2-206ENST00000487091 TBC1D3HP0C7X1 549 aa19.54■□□□□ 0.72
CLIP2-206ENST00000487091 ATP1A3P13637 1013 aa19.54■□□□□ 0.72
CLIP2-206ENST00000487091 SPINK2P20155 84 aa19.54■□□□□ 0.72
CLIP2-206ENST00000487091 NUDT1P36639 197 aa19.54■□□□□ 0.72
CLIP2-206ENST00000487091 METAP1P53582 386 aa19.54■□□□□ 0.72
CLIP2-206ENST00000487091 C21orf59P57076 290 aa19.54■□□□□ 0.72
CLIP2-206ENST00000487091 SLC20A2Q08357 652 aa19.54■□□□□ 0.72
CLIP2-206ENST00000487091 CDO1Q16878 200 aa19.54■□□□□ 0.72
CLIP2-206ENST00000487091 KCNT1Q5JUK3 1230 aa19.54■□□□□ 0.72
CLIP2-206ENST00000487091 TBC1D3GQ6DHY5 549 aa19.54■□□□□ 0.72
CLIP2-206ENST00000487091 TBC1D3CQ6IPX1 549 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms