RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.52□□□□□ -1.69
SNRNP40-205ENST00000486941 NEK9Q8TD19 979 aa4.52□□□□□ -1.69
SNRNP40-205ENST00000486941 SEPT8Q92599 483 aa4.52□□□□□ -1.69
SNRNP40-205ENST00000486941 TOP1MTQ969P6 601 aa4.52□□□□□ -1.69
SNRNP40-205ENST00000486941 MRPL38Q96DV4 380 aaKnown RBP4.52□□□□□ -1.69
SNRNP40-205ENST00000486941 SPATA33Q96N06 139 aa4.52□□□□□ -1.69
SNRNP40-205ENST00000486941 UBAC1Q9BSL1 405 aa4.52□□□□□ -1.69
SNRNP40-205ENST00000486941 CFAP97Q9P2B7 532 aa4.52□□□□□ -1.69
SNRNP40-205ENST00000486941 MTUS1Q9ULD2 1270 aa4.52□□□□□ -1.69
SNRNP40-205ENST00000486941 PCDHA1Q9Y5I3 950 aa4.52□□□□□ -1.69
SNRNP40-205ENST00000486941 XIRP2A4UGR9 3374 aa4.52□□□□□ -1.69
SNRNP40-205ENST00000486941 LOXHD1Q8IVV2 1947 aa4.52□□□□□ -1.69
SNRNP40-205ENST00000486941 ATG2AQ2TAZ0 1938 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 C17orf102A2RUQ5 167 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 KLRF2D3W0D1 207 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 H3BNC9 293 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 PPEF2O14830 753 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 NCK2O43639 380 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 STAM2O75886 525 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 CHEK2O96017 543 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 TUBB4AP04350 444 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 POLR2MP0CAP2 368 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 SMIM10L2AP0DMW4 78 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 SMIM10L2BP0DMW5 78 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 ALADP13716 330 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 ITGALP20701 1170 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 UBA1P22314 1058 aaKnown RBP4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 KCNA5P22460 613 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 CCND2P30279 289 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 ICAM3P32942 547 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 ADKP55263 362 aaKnown RBP4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 KRTAP10-7P60409 375 aaPredicted RBP4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 NEDD9Q14511 834 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 DAZAP2Q15038 168 aaPredicted RBP4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 EPC2Q52LR7 807 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 AARS2Q5JTZ9 985 aaKnown RBP4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 IFIT1BQ5T764 474 aaKnown RBP4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 CWC27Q6UX04 472 aaKnown RBP4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 TECPR1Q7Z6L1 1165 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 MYOCDQ8IZQ8 938 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 ATRIPQ8WXE1 791 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 APBB2Q92870 758 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 ATP6V0A1Q93050 837 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 PABPC5Q96DU9 382 aaKnown RBP4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 C17orf80Q9BSJ5 609 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 RWDD1Q9H446 243 aaPredicted RBP4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 MLXIPQ9HAP2 919 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 DUSP22Q9NRW4 184 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 DIAPH3Q9NSV4 1193 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 MAD2L2Q9UI95 211 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 FAM50BQ9Y247 325 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 COL4A6Q14031 1691 aa4.51□□□□□ -1.69
SNRNP40-205ENST00000486941 ZDBF2Q9HCK1 2354 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 TECTAO75443 2155 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 FNDC1Q4ZHG4 1894 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 C5orf67F2Z3F1 127 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 DNAJB5O75953 348 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 LGALS2P05162 132 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 RB1P06400 928 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 IL9P15248 144 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 NDUFB7P17568 137 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 CERS1P27544 350 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 HOXA13P31271 388 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 HK3P52790 923 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 FOXG1P55316 489 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 EEFSECP57772 596 aaKnown RBP4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 NUCB1Q02818 461 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 TRDNQ13061 729 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 GPM6BQ13491 265 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 GRM4Q14833 912 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 TCEAL5Q5H9L2 206 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 XRRA1Q6P2D8 792 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 ANKRD16Q6P6B7 361 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 METTL7BQ6UX53 244 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 NAPRTQ6XQN6 538 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 RPAINQ86UA6 219 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 CHD1LQ86WJ1 897 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 PRR18Q8N4B5 295 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 FANCBQ8NB91 859 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 C3orf20Q8ND61 904 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 FAM46DQ8NEK8 389 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 IL31RAQ8NI17 732 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 TNPO1Q92973 898 aaKnown RBP4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 INPP4AQ96PE3 977 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 PIGSQ96S52 555 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 YME1L1Q96TA2 773 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 SENP7Q9BQF6 1050 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 PRSS22Q9GZN4 317 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 LMAN2LQ9H0V9 348 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 SETD4Q9NVD3 440 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 ELOVL5Q9NYP7 299 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 MCM8Q9UJA3 840 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 SERTAD3Q9UJW9 196 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 PRKAB1Q9Y478 270 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 CACNA1HO95180 2353 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 MYO10Q9HD67 2058 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 EVPLQ92817 2033 aa4.5□□□□□ -1.69
SNRNP40-205ENST00000486941 FRMPD4Q14CM0 1322 aa4.49□□□□□ -1.69
SNRNP40-205ENST00000486941 NRCAMQ92823 1304 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms