RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 ZNF212Q9UDV6 495 aa19.6■□□□□ 0.73
SNX17-206ENST00000484886 NYNRINQ9P2P1 1898 aaKnown RBP19.6■□□□□ 0.73
SNX17-206ENST00000484886 CEP192Q8TEP8 1941 aa19.59■□□□□ 0.73
SNX17-206ENST00000484886 ATXN2Q99700 1313 aaKnown RBP19.59■□□□□ 0.73
SNX17-206ENST00000484886 BCLAF3A2AJT9 711 aaKnown RBP19.59■□□□□ 0.73
SNX17-206ENST00000484886 RAMP2O60895 175 aa19.59■□□□□ 0.73
SNX17-206ENST00000484886 GLDCP23378 1020 aa19.59■□□□□ 0.73
SNX17-206ENST00000484886 SSR1P43307 286 aaKnown RBP19.59■□□□□ 0.73
SNX17-206ENST00000484886 ZNF75DP51815 510 aa19.59■□□□□ 0.73
SNX17-206ENST00000484886 ZBTB16Q05516 673 aa19.59■□□□□ 0.73
SNX17-206ENST00000484886 SPDYCQ5MJ68 293 aa19.59■□□□□ 0.73
SNX17-206ENST00000484886 DAB2IPQ5VWQ8 1189 aa19.59■□□□□ 0.73
SNX17-206ENST00000484886 RETSATQ6NUM9 610 aa19.59■□□□□ 0.73
SNX17-206ENST00000484886 Q6ZVU0 165 aa19.59■□□□□ 0.73
SNX17-206ENST00000484886 NLRP14Q86W24 1093 aa19.59■□□□□ 0.73
SNX17-206ENST00000484886 GAS2L3Q86XJ1 694 aa19.59■□□□□ 0.73
SNX17-206ENST00000484886 SH2D3CQ8N5H7 860 aa19.59■□□□□ 0.73
SNX17-206ENST00000484886 ARFGAP1Q8N6T3 406 aa19.59■□□□□ 0.73
SNX17-206ENST00000484886 PTPRN2Q92932 1015 aa19.59■□□□□ 0.73
SNX17-206ENST00000484886 BTBD6Q96KE9 485 aa19.59■□□□□ 0.73
SNX17-206ENST00000484886 HSPA12BQ96MM6 686 aa19.59■□□□□ 0.73
SNX17-206ENST00000484886 PEBP4Q96S96 227 aa19.59■□□□□ 0.73
SNX17-206ENST00000484886 CHP1Q99653 195 aa19.59■□□□□ 0.73
SNX17-206ENST00000484886 SNRNP25Q9BV90 132 aaKnown RBP19.59■□□□□ 0.73
SNX17-206ENST00000484886 NHEJ1Q9H9Q4 299 aaPredicted RBP19.59■□□□□ 0.73
SNX17-206ENST00000484886 VPS45Q9NRW7 570 aa19.59■□□□□ 0.73
SNX17-206ENST00000484886 NDFIP2Q9NV92 336 aa19.59■□□□□ 0.73
SNX17-206ENST00000484886 IP6K2Q9UHH9 426 aa19.59■□□□□ 0.73
SNX17-206ENST00000484886 HPCAL4Q9UM19 191 aa19.59■□□□□ 0.73
SNX17-206ENST00000484886 NCKAP1Q9Y2A7 1128 aa19.59■□□□□ 0.73
SNX17-206ENST00000484886 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.59■□□□□ 0.73
SNX17-206ENST00000484886 WDR87Q6ZQQ6 2873 aa19.58■□□□□ 0.73
SNX17-206ENST00000484886 MEI4A8MW99 385 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 EEF2KO00418 725 aaKnown RBP19.58■□□□□ 0.72
SNX17-206ENST00000484886 DAPK3O43293 454 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 ATP9BO43861 1147 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 LRCH4O75427 683 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 MT-CO1P00395 513 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 IL1BP01584 269 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 H2AFZP0C0S5 128 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 SRCP12931 536 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 ACVRL1P37023 503 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 LMNB2Q03252 620 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 ZNF33AQ06730 810 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 SFSWAPQ12872 951 aaKnown RBP19.58■□□□□ 0.72
SNX17-206ENST00000484886 TBX2Q13207 712 aaPredicted RBP19.58■□□□□ 0.72
SNX17-206ENST00000484886 PIGHQ14442 188 aaPredicted RBP19.58■□□□□ 0.72
SNX17-206ENST00000484886 ELAVL3Q14576 367 aaKnown RBP19.58■□□□□ 0.72
SNX17-206ENST00000484886 POLD3Q15054 466 aaPredicted RBP19.58■□□□□ 0.72
SNX17-206ENST00000484886 SF3A2Q15428 464 aaKnown RBP19.58■□□□□ 0.72
SNX17-206ENST00000484886 CST6Q15828 149 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 AASDHQ4L235 1098 aaPredicted RBP19.58■□□□□ 0.72
SNX17-206ENST00000484886 PPP6R3Q5H9R7 873 aaPredicted RBP19.58■□□□□ 0.72
SNX17-206ENST00000484886 PRR23CQ6ZRP0 262 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 H2AFVQ71UI9 128 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 DSG4Q86SJ6 1040 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 RGL4Q8IZJ4 473 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 RTL3Q8N8U3 475 aaKnown RBP19.58■□□□□ 0.72
SNX17-206ENST00000484886 ZNF564Q8TBZ8 553 aaPredicted RBP19.58■□□□□ 0.72
SNX17-206ENST00000484886 FRS2Q8WU20 508 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 OR8D1Q8WZ84 308 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 CCDC114Q96M63 670 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 OMDQ99983 421 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 PABPC3Q9H361 631 aaKnown RBP19.58■□□□□ 0.72
SNX17-206ENST00000484886 ZWILCHQ9H900 591 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 SPTLC3Q9NUV7 552 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 WSB2Q9NYS7 404 aaPredicted RBP19.58■□□□□ 0.72
SNX17-206ENST00000484886 NEU3Q9UQ49 428 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 HS3ST2Q9Y278 367 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 FARP1Q9Y4F1 1045 aaPredicted RBP19.58■□□□□ 0.72
SNX17-206ENST00000484886 NUP205Q92621 2012 aa19.58■□□□□ 0.72
SNX17-206ENST00000484886 ZNF292O60281 2723 aa19.57■□□□□ 0.72
SNX17-206ENST00000484886 K7ERQ8 282 aa19.57■□□□□ 0.72
SNX17-206ENST00000484886 MYO1FO00160 1098 aa19.57■□□□□ 0.72
SNX17-206ENST00000484886 MID1O15344 667 aa19.57■□□□□ 0.72
SNX17-206ENST00000484886 FGF10O15520 208 aaPredicted RBP19.57■□□□□ 0.72
SNX17-206ENST00000484886 ZNF806P0C7X5 589 aa19.57■□□□□ 0.72
SNX17-206ENST00000484886 TGM1P22735 817 aa19.57■□□□□ 0.72
SNX17-206ENST00000484886 ITPKAP23677 461 aa19.57■□□□□ 0.72
SNX17-206ENST00000484886 PCK1P35558 622 aa19.57■□□□□ 0.72
SNX17-206ENST00000484886 VASPP50552 380 aaPredicted RBP19.57■□□□□ 0.72
SNX17-206ENST00000484886 ACAP1Q15027 740 aa19.57■□□□□ 0.72
SNX17-206ENST00000484886 CA9Q16790 459 aa19.57■□□□□ 0.72
SNX17-206ENST00000484886 SYCP2LQ5T4T6 812 aa19.57■□□□□ 0.72
SNX17-206ENST00000484886 FOXJ1Q92949 421 aa19.57■□□□□ 0.72
SNX17-206ENST00000484886 FAM129BQ96TA1 746 aa19.57■□□□□ 0.72
SNX17-206ENST00000484886 PACSIN1Q9BY11 444 aa19.57■□□□□ 0.72
SNX17-206ENST00000484886 MAGEH1Q9H213 219 aa19.57■□□□□ 0.72
SNX17-206ENST00000484886 FBXL12Q9NXK8 326 aa19.57■□□□□ 0.72
SNX17-206ENST00000484886 NENFQ9UMX5 172 aa19.57■□□□□ 0.72
SNX17-206ENST00000484886 SCML1Q9UN30 329 aa19.57■□□□□ 0.72
SNX17-206ENST00000484886 A0A1W2PP55 124 aa19.56■□□□□ 0.72
SNX17-206ENST00000484886 EIF3CLB5ME19 914 aaKnown RBP19.56■□□□□ 0.72
SNX17-206ENST00000484886 SMAD6O43541 496 aaKnown RBP19.56■□□□□ 0.72
SNX17-206ENST00000484886 FOXD2O60548 495 aaPredicted RBP19.56■□□□□ 0.72
SNX17-206ENST00000484886 RNASEH2AO75792 299 aaKnown RBP19.56■□□□□ 0.72
SNX17-206ENST00000484886 ADH1BP00325 375 aa19.56■□□□□ 0.72
SNX17-206ENST00000484886 IGLV3-19P01714 112 aa19.56■□□□□ 0.72
SNX17-206ENST00000484886 SLC8A1P32418 973 aa19.56■□□□□ 0.72
SNX17-206ENST00000484886 HTR7P34969 479 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms