RNA–Protein interactions for RNA: ENST00000483344.1

FNDC3B-210, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-210ENST00000483344 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.78□□□□□ -1.64
FNDC3B-210ENST00000483344 IFT27Q9BW83 186 aa4.78□□□□□ -1.64
FNDC3B-210ENST00000483344 SCNM1Q9BWG6 230 aa4.78□□□□□ -1.64
FNDC3B-210ENST00000483344 AGXT2Q9BYV1 514 aa4.78□□□□□ -1.64
FNDC3B-210ENST00000483344 INTS2Q9H0H0 1204 aaKnown RBP4.78□□□□□ -1.64
FNDC3B-210ENST00000483344 ADARB2Q9NS39 739 aaKnown RBP4.78□□□□□ -1.64
FNDC3B-210ENST00000483344 HDAC6Q9UBN7 1215 aa4.78□□□□□ -1.64
FNDC3B-210ENST00000483344 DHDHQ9UQ10 334 aa4.78□□□□□ -1.64
FNDC3B-210ENST00000483344 POLR2AP24928 1970 aaKnown RBP4.78□□□□□ -1.64
FNDC3B-210ENST00000483344 ZNF335Q9H4Z2 1342 aaPredicted RBP4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 GOLGA6L10A0A0M3HER8 536 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 SMIM35A0A1B0GVV1 85 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 C17orf100A8MU93 164 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 CHRM4P08173 479 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 TNFAIP3P21580 790 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 ATP5F1P24539 256 aaPredicted RBP4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 ABCD3P28288 659 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 EPHB2P29323 1055 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 SKIV2L2P42285 1042 aaKnown RBP4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 PAFAH1B1P43034 410 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 CPA2P48052 419 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 RPS13P62277 151 aaKnown RBP4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 NAPEPLDQ6IQ20 393 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 ACAD10Q6JQN1 1059 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 SLC22A25Q6T423 547 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 CNGA4Q8IV77 575 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 TMEM217Q8N7C4 229 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 SETD9Q8NE22 299 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 TNIP2Q8NFZ5 429 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 TBC1D22AQ8WUA7 517 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 RUFY2Q8WXA3 655 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 RAB40AQ8WXH6 277 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 KAT2AQ92830 837 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 SKA1Q96BD8 255 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 ELP4Q96EB1 424 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 CLMNQ96JQ2 1002 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 FRG2BQ96QU4 278 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 EYA3Q99504 573 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 CLSTN3Q9BQT9 956 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 PIMREGQ9BSJ6 248 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 FRMD8Q9BZ67 464 aaPredicted RBP4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 LMAN2LQ9H0V9 348 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 EPHX3Q9H6B9 360 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 PAPOLBQ9NRJ5 636 aaKnown RBP4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 BEX4Q9NWD9 120 aaPredicted RBP4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 IRAK4Q9NWZ3 460 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 C11orf21Q9P2W6 132 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 PNMA2Q9UL42 364 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 OSGIN2Q9Y236 505 aa4.77□□□□□ -1.65
FNDC3B-210ENST00000483344 OR6C68A6NDL8 312 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 TNPO2O14787 897 aaKnown RBP4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 TSPAN4O14817 238 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 PER2O15055 1255 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 UGDHO60701 494 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 BCAR3O75815 825 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 CBX6O95503 412 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 CD4P01730 458 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 LCKP06239 509 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 CIITAP33076 1130 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 GGT5P36269 586 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 ARHGAP25P42331 645 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 CASP6P55212 293 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 CDH15P55291 814 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 DAZAP2Q15038 168 aaPredicted RBP4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 SLC18A3Q16572 532 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 SMN1Q16637 294 aaKnown RBP4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 KIAA1614Q5VZ46 1190 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 TMEM268Q5VZI3 342 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 FAAH2Q6GMR7 532 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 ISM2Q6H9L7 571 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 SLC18B1Q6NT16 456 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 YTHDF3Q7Z739 585 aaKnown RBP4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 NEK8Q86SG6 692 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 ARMC8Q8IUR7 673 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 GHDCQ8N2G8 530 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 DDB2Q92466 427 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 CUL5Q93034 780 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 SIGLEC11Q96RL6 698 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 TUBB6Q9BUF5 446 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 QTRT1Q9BXR0 403 aaKnown RBP4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 SLITRK6Q9H5Y7 841 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 VEZTQ9HBM0 779 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 ZNF304Q9HCX3 659 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 SMC4Q9NTJ3 1288 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 TMEM45AQ9NWC5 275 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 PPP1R14DQ9NXH3 145 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 HCN3Q9P1Z3 774 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 SLC25A10Q9UBX3 287 aaPredicted RBP4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 UTS2RQ9UKP6 389 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 LAMP3Q9UQV4 416 aa4.76□□□□□ -1.65
FNDC3B-210ENST00000483344 BICRAQ9NZM4 1560 aa4.75□□□□□ -1.65
FNDC3B-210ENST00000483344 GAGE10A6NGK3 116 aa4.75□□□□□ -1.65
FNDC3B-210ENST00000483344 B4E171 279 aa4.75□□□□□ -1.65
FNDC3B-210ENST00000483344 TEX22C9J3V5 150 aa4.75□□□□□ -1.65
FNDC3B-210ENST00000483344 F8W810 466 aa4.75□□□□□ -1.65
FNDC3B-210ENST00000483344 RHODO00212 210 aa4.75□□□□□ -1.65
FNDC3B-210ENST00000483344 TP73O15350 636 aa4.75□□□□□ -1.65
FNDC3B-210ENST00000483344 PRPF4O43172 522 aaKnown RBP eCLIP4.75□□□□□ -1.65
FNDC3B-210ENST00000483344 NEURL1O76050 574 aa4.75□□□□□ -1.65
FNDC3B-210ENST00000483344 WNT1P04628 370 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms