RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 TSG101Q99816 390 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 ABCG4Q9H172 646 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 GOLPH3LQ9H4A5 285 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 KLHL11Q9NVR0 708 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 SLC12A6Q9UHW9 1150 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 PPM1HQ9ULR3 514 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 MUC22E2RYF6 1773 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-206ENST00000483030 COL5A1P20908 1838 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-206ENST00000483030 SYNJ2BP-COX16A0A087WUM0 186 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 A0A1B0GVM2 712 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 A0A1W2PQ27 194 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 A0A1W2PQ64 194 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 A0A1W2PQU0 124 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 TRIM49BA6NDI0 452 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 CYSRT1A8MQ03 144 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 KCNU1A8MYU2 1149 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 C1QTNF3-AMACRE9PGA6 284 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 KLK10O43240 276 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 SART1O43290 800 aaKnown RBP7.59□□□□□ -1.19
CSDE1-206ENST00000483030 ATP9BO43861 1147 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 KALRNO60229 2985 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 RNGTTO60942 597 aaKnown RBP7.59□□□□□ -1.19
CSDE1-206ENST00000483030 USP12O75317 370 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 CSO75390 466 aaKnown RBP7.59□□□□□ -1.19
CSDE1-206ENST00000483030 GIMD1P0DJR0 217 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 CKMT1AP12532 417 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 ACADSBP45954 432 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 LSSP48449 732 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 RPL34P49207 117 aaKnown RBP7.59□□□□□ -1.19
CSDE1-206ENST00000483030 FMO5P49326 533 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 UCNP55089 124 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 PCBP4P57723 403 aaKnown RBP7.59□□□□□ -1.19
CSDE1-206ENST00000483030 TMPRSS3P57727 454 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 TAS2R38P59533 333 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 YWHAZP63104 245 aaKnown RBP7.59□□□□□ -1.19
CSDE1-206ENST00000483030 GABREP78334 506 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 PITX1P78337 314 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-206ENST00000483030 RHDQ02161 417 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 KCNMA1Q12791 1236 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 PNOCQ13519 176 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 LY6DQ14210 128 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 TAF5Q15542 800 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 ZNF542PQ5EBM4 170 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 CDCP2Q5VXM1 449 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 CXorf57Q6NSI4 855 aaKnown RBP7.59□□□□□ -1.19
CSDE1-206ENST00000483030 FBXL22Q6P050 247 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 DENND1BQ6P3S1 775 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 Q6ZVU0 165 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 BEND5Q7L4P6 421 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 LSMEM2Q8N112 164 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 ATP6V0D2Q8N8Y2 350 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 TMEM145Q8NBT3 493 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 OR52K2Q8NGK3 314 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 KCNE4Q8WWG9 221 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 ERCC4Q92889 916 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-206ENST00000483030 ALG14Q96F25 216 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 WBP1Q96G27 269 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 APOLD1Q96LR9 279 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 PCMTD1Q96MG8 357 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-206ENST00000483030 PPP1R9BQ96SB3 815 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 PRMT1Q99873 361 aaKnown RBP7.59□□□□□ -1.19
CSDE1-206ENST00000483030 FEM1AQ9BSK4 669 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 CALN1Q9BXU9 219 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 SEMA4CQ9C0C4 833 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 POLR1BQ9H9Y6 1135 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 POPDC2Q9HBU9 364 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 METTL14Q9HCE5 456 aaKnown RBP7.59□□□□□ -1.19
CSDE1-206ENST00000483030 PREBQ9HCU5 417 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 FZD3Q9NPG1 666 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.59□□□□□ -1.19
CSDE1-206ENST00000483030 COX16Q9P0S2 106 aa7.59□□□□□ -1.19
CSDE1-206ENST00000483030 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-206ENST00000483030 TCAF2A6NFQ2 919 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 E5RJQ4 531 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 PYCARD-AS1I3L0S3 204 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 KPNA3O00505 521 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-206ENST00000483030 ALOX15BO15296 676 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 PIAS2O75928 621 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 DXOO77932 396 aaKnown RBP7.58□□□□□ -1.2
CSDE1-206ENST00000483030 MT-CO1P00395 513 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 IGLV3-25P01717 112 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 ALPPL2P10696 532 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 AKT2P31751 481 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 IRAK1P51617 712 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 OXCT1P55809 520 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 CLDN2P57739 230 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 ERVPABLB-1P60509 514 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 CENPCQ03188 943 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 ZNF177Q13360 481 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-206ENST00000483030 EIF4EBP2Q13542 120 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-206ENST00000483030 AUHQ13825 339 aaKnown RBP7.58□□□□□ -1.2
CSDE1-206ENST00000483030 ZNF284Q2VY69 593 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 RABGAP1LQ5R372 815 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 PIP5KL1Q5T9C9 394 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 ZNF658Q5TYW1 1059 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-206ENST00000483030 NEK5Q6P3R8 708 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 TMEM110Q86TL2 294 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 HORMAD1Q86X24 394 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 ARHGEF19Q8IW93 802 aa7.58□□□□□ -1.2
CSDE1-206ENST00000483030 OR13H1Q8NG92 308 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms