RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 PDK2Q15119 407 aa11.24□□□□□ -0.61
RPGR-208ENST00000482855 CDO1Q16878 200 aa11.24□□□□□ -0.61
RPGR-208ENST00000482855 CYP4V2Q6ZWL3 525 aaPredicted RBP11.24□□□□□ -0.61
RPGR-208ENST00000482855 ZNF354CQ86Y25 554 aa11.24□□□□□ -0.61
RPGR-208ENST00000482855 PLD6Q8N2A8 252 aaKnown RBP11.24□□□□□ -0.61
RPGR-208ENST00000482855 ATP6V0A1Q93050 837 aa11.24□□□□□ -0.61
RPGR-208ENST00000482855 TARS2Q9BW92 718 aaKnown RBP11.24□□□□□ -0.61
RPGR-208ENST00000482855 GATA5Q9BWX5 397 aaPredicted RBP11.24□□□□□ -0.61
RPGR-208ENST00000482855 MTMR12Q9C0I1 747 aa11.24□□□□□ -0.61
RPGR-208ENST00000482855 ZNF385DQ9H6B1 395 aa11.24□□□□□ -0.61
RPGR-208ENST00000482855 ATAD3AQ9NVI7 634 aa11.24□□□□□ -0.61
RPGR-208ENST00000482855 K7ERI5 159 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 AKAP10O43572 662 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 GCATO75600 419 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 GPD1P21695 349 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 GP5P40197 560 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 PMS2P3Q13401 168 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 RAB39AQ14964 217 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 ANKRD26P1Q6NSI1 321 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 PPP4R4Q6NUP7 873 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 SLC2A7Q6PXP3 512 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 TMEM26Q6ZUK4 368 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 SIX6OS1Q8N1H7 587 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 TRUB1Q8WWH5 349 aaKnown RBP11.23□□□□□ -0.61
RPGR-208ENST00000482855 PBXIP1Q96AQ6 731 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 CNPY3Q9BT09 278 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 PDLIM7Q9NR12 457 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 CNOT6Q9ULM6 557 aaKnown RBP11.23□□□□□ -0.61
RPGR-208ENST00000482855 ERGIC3Q9Y282 383 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 TANC1Q9C0D5 1861 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 ADGRA2Q96PE1 1338 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 TESPA1A2RU30 521 aaPredicted RBP11.23□□□□□ -0.61
RPGR-208ENST00000482855 TCAF2A6NFQ2 919 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 SNAP91O60641 907 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 SEC24DO94855 1032 aaPredicted RBP11.23□□□□□ -0.61
RPGR-208ENST00000482855 OXSR1O95747 527 aaPredicted RBP11.23□□□□□ -0.61
RPGR-208ENST00000482855 PGAM1P18669 254 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 HK2P52789 917 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 SESN2P58004 480 aaPredicted RBP11.23□□□□□ -0.61
RPGR-208ENST00000482855 RPS3AP61247 264 aaKnown RBP11.23□□□□□ -0.61
RPGR-208ENST00000482855 FKBP1AP62942 108 aaKnown RBP11.23□□□□□ -0.61
RPGR-208ENST00000482855 SEMA5AQ13591 1074 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 CYP2A13Q16696 494 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 TRIM16LQ309B1 348 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 RAB6CQ53S08 254 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 HMBOX1Q6NT76 420 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 SCYL2Q6P3W7 929 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 CHSY3Q70JA7 882 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 EEPD1Q7L9B9 569 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 MCF2L2Q86YR7 1114 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 WDR49Q8IV35 697 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 GPC2Q8N158 579 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 DCLK2Q8N568 766 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 PCDH20Q8N6Y1 951 aaKnown RBP11.23□□□□□ -0.61
RPGR-208ENST00000482855 RDM1Q8NG50 284 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 PCDH19Q8TAB3 1148 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 SLCO4A1Q96BD0 722 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 MCRS1Q96EZ8 462 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 UHRF1Q96T88 793 aaPredicted RBP11.23□□□□□ -0.61
RPGR-208ENST00000482855 RAB6CQ9H0N0 254 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 GPATCH2LQ9NWQ4 482 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 MTMR10Q9NXD2 777 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 FBXO40Q9UH90 709 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 AFG3L2Q9Y4W6 797 aa11.23□□□□□ -0.61
RPGR-208ENST00000482855 IQCA1LA6NCM1 817 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 LRRIQ4A6NIV6 560 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.22□□□□□ -0.61
RPGR-208ENST00000482855 SOCS2O14508 198 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 SPTLC1O15269 473 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 NPM3O75607 178 aaKnown RBP11.22□□□□□ -0.61
RPGR-208ENST00000482855 ICAM1P05362 532 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 MYF6P23409 242 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 IL4RP24394 825 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 ITGADQ13349 1161 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 C15orf59Q2T9L4 293 aaPredicted RBP11.22□□□□□ -0.61
RPGR-208ENST00000482855 ZNF699Q32M78 642 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 SNRNP48Q6IEG0 339 aaKnown RBP11.22□□□□□ -0.61
RPGR-208ENST00000482855 SLC15A4Q8N697 577 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 LPGAT1Q92604 370 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 ATXN7L3BQ96GX2 97 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 POLR1BQ9H9Y6 1135 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 UTP6Q9NYH9 597 aaKnown RBP11.22□□□□□ -0.61
RPGR-208ENST00000482855 RNF181Q9P0P0 153 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 COPG1Q9Y678 874 aaKnown RBP11.22□□□□□ -0.61
RPGR-208ENST00000482855 HEATR9A2RTY3 570 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 F5H423 210 aaPredicted RBP11.22□□□□□ -0.61
RPGR-208ENST00000482855 PAPSS1O43252 624 aaPredicted RBP11.22□□□□□ -0.61
RPGR-208ENST00000482855 PIGNO95427 931 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 PIGRP01833 764 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 LTFP02788 710 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 GNAO1P09471 354 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 MLNP12872 115 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 PDGFRAP16234 1089 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 JAK1P23458 1154 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 RPS12P25398 132 aaKnown RBP11.22□□□□□ -0.61
RPGR-208ENST00000482855 MGAT1P26572 445 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 NME5P56597 212 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 TRAF2Q12933 501 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 PGM5Q15124 567 aa11.22□□□□□ -0.61
RPGR-208ENST00000482855 GRTP1Q5TC63 336 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms