RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 NKD2Q969F2 451 aaPredicted RBP3.49□□□□□ -1.85
SMC6-208ENST00000481708 MIEF2Q96C03 454 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 MRPL38Q96DV4 380 aaKnown RBP3.49□□□□□ -1.85
SMC6-208ENST00000481708 FCRL2Q96LA5 508 aaPredicted RBP3.49□□□□□ -1.85
SMC6-208ENST00000481708 CACNG6Q9BXT2 260 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 EIF2AQ9BY44 585 aaKnown RBP3.49□□□□□ -1.85
SMC6-208ENST00000481708 IKZF4Q9H2S9 585 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 MRPL44Q9H9J2 332 aaKnown RBP3.49□□□□□ -1.85
SMC6-208ENST00000481708 MID1IP1Q9NPA3 183 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 ADPRHL2Q9NX46 363 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 C2CD2Q9Y426 696 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 CAPN7Q9Y6W3 813 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 SMIM30A4D0T7 59 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 OR2A25A4D2G3 310 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 AKR1B15C9JRZ8 316 aaPredicted RBP3.49□□□□□ -1.85
SMC6-208ENST00000481708 KLKB1P03952 638 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 ERBB2P04626 1255 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 PIM1P11309 404 aaPredicted RBP3.49□□□□□ -1.85
SMC6-208ENST00000481708 EDN2P20800 178 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 ARL3P36405 182 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 NPY4RP50391 375 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 ROM1Q03395 351 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 CALD1Q05682 793 aaKnown RBP3.49□□□□□ -1.85
SMC6-208ENST00000481708 CPSF6Q16630 551 aaKnown RBP eCLIP3.49□□□□□ -1.85
SMC6-208ENST00000481708 MEP1BQ16820 701 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 SLC9B1Q4ZJI4 515 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 CYP2R1Q6VVX0 501 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 PIK3AP1Q6ZUJ8 805 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 RAB11FIP2Q7L804 512 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 RABEPKQ7Z6M1 372 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 PLXDC1Q8IUK5 500 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 FAM71DQ8N9W8 422 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 CCDC114Q96M63 670 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 NEK1Q96PY6 1258 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 INTS14Q96SY0 518 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 MESP1Q9BRJ9 268 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 APOL6Q9BWW8 343 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 BCAS3Q9H6U6 928 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 HOXC10Q9NYD6 342 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 KCNK7Q9Y2U2 307 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 CLDN16Q9Y5I7 305 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 MYO3BQ8WXR4 1341 aa3.49□□□□□ -1.85
SMC6-208ENST00000481708 FAM90A8PA6NJQ4 464 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 MPHOSPH10O00566 681 aaKnown RBP3.48□□□□□ -1.85
SMC6-208ENST00000481708 ITGA10O75578 1167 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 FAM90A13PP0C7W8 464 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 FAM90A24PP0C7X0 464 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 FTH1P19P0C7X4 201 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 PRR35P0CG20 571 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 HOXC8P31273 242 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 KRT2P35908 639 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 TAGLN2P37802 199 aaKnown RBP3.48□□□□□ -1.85
SMC6-208ENST00000481708 CTXN1P60606 82 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 HTD2P86397 168 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 BNIP3Q12983 259 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 TRIM29Q14134 588 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 RALGPS1Q5JS13 557 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 DEPDC1Q5TB30 811 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 SERPINA13PQ6UXR4 307 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 CHST9Q7L1S5 443 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 LRRC8DQ7L1W4 858 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 PPP1R32Q7Z5V6 425 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 RSPH3Q86UC2 560 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 NAT16Q8N8M0 369 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 TMEM116Q8NCL8 245 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 ETNPPLQ8TBG4 499 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 RSC1A1Q92681 617 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 RMDN1Q96DB5 314 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 SIPA1Q96FS4 1042 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 THUMPD3Q9BV44 507 aaKnown RBP3.48□□□□□ -1.85
SMC6-208ENST00000481708 HSPB7Q9UBY9 170 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 DBR1Q9UK59 544 aaKnown RBP3.48□□□□□ -1.85
SMC6-208ENST00000481708 HPSEQ9Y251 543 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 SNX11Q9Y5W9 270 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 SSU72P8A0A1W2PR75 194 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 FAM181BA6NEQ2 426 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 C17orf100A8MU93 164 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 TXNL1O43396 289 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 TBCAO75347 108 aaKnown RBP3.48□□□□□ -1.85
SMC6-208ENST00000481708 SNX4O95219 450 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 GGPS1O95749 300 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 GNAI2P04899 355 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 GAAP10253 952 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 SFTPCP11686 197 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 PFKLP17858 780 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 FDXRP22570 491 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 PTGS1P23219 599 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 RPA1P27694 616 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 ALDH1B1P30837 517 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 GRK5P34947 590 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 RBM5P52756 815 aaKnown RBP eCLIP3.48□□□□□ -1.85
SMC6-208ENST00000481708 C21orf58P58505 322 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 TRA2AQ13595 282 aaKnown RBP eCLIP3.48□□□□□ -1.85
SMC6-208ENST00000481708 FAM187BQ17R55 369 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 PLA1AQ53H76 456 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 ARHGAP11AQ6P4F7 1023 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 SEM1Q6ZVN7 128 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 SLC35B2Q8TB61 432 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 CORO2AQ92828 525 aa3.48□□□□□ -1.85
SMC6-208ENST00000481708 TRIM6Q9C030 488 aaPredicted RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms