RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 ZNF558Q96NG5 402 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 CPNE1Q99829 537 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 ACTR5Q9H9F9 607 aaPredicted RBP20.26■□□□□ 0.83
CHKB-209ENST00000481673 MPP6Q9NZW5 540 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 CCT8L1PA6NM43 557 aa20.25■□□□□ 0.83
CHKB-209ENST00000481673 MYO1CO00159 1063 aa20.25■□□□□ 0.83
CHKB-209ENST00000481673 RFPL1O75677 317 aa20.25■□□□□ 0.83
CHKB-209ENST00000481673 SOAT2O75908 522 aa20.25■□□□□ 0.83
CHKB-209ENST00000481673 DHRS4L1P0CG22 281 aa20.25■□□□□ 0.83
CHKB-209ENST00000481673 PPP3CCP48454 512 aa20.25■□□□□ 0.83
CHKB-209ENST00000481673 MAPKAPK2P49137 400 aa20.25■□□□□ 0.83
CHKB-209ENST00000481673 PARP15Q460N3 678 aa20.25■□□□□ 0.83
CHKB-209ENST00000481673 GRTP1Q5TC63 336 aa20.25■□□□□ 0.83
CHKB-209ENST00000481673 GPR65Q8IYL9 337 aa20.25■□□□□ 0.83
CHKB-209ENST00000481673 STKLD1Q8NE28 680 aa20.25■□□□□ 0.83
CHKB-209ENST00000481673 ZNF75CPQ92670 426 aaPredicted RBP20.25■□□□□ 0.83
CHKB-209ENST00000481673 ATP2A3Q93084 1043 aa20.25■□□□□ 0.83
CHKB-209ENST00000481673 RBM22Q9NW64 420 aaKnown RBP eCLIP20.25■□□□□ 0.83
CHKB-209ENST00000481673 NSMCE4AQ9NXX6 385 aa20.25■□□□□ 0.83
CHKB-209ENST00000481673 KLHL14Q9P2G3 628 aa20.25■□□□□ 0.83
CHKB-209ENST00000481673 TET1Q8NFU7 2136 aa20.25■□□□□ 0.83
CHKB-209ENST00000481673 GOLGA8RI6L899 631 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 ABLIM3O94929 683 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 TBX18O95935 607 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 ATF6P18850 670 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 ETV4P43268 484 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 CRADDP78560 199 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 TNK2Q07912 1038 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 LACTB2Q53H82 288 aaPredicted RBP20.24■□□□□ 0.83
CHKB-209ENST00000481673 AZIN2Q96A70 460 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 ZNF689Q96CS4 500 aaPredicted RBP20.24■□□□□ 0.83
CHKB-209ENST00000481673 TMEM169Q96HH4 297 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 SOX13Q9UN79 622 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 ATP11BQ9Y2G3 1177 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 CRHR1P34998 444 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 GP5P40197 560 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 DSG1Q02413 1049 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 MPP3Q13368 585 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 ANKRD20A4Q4UJ75 823 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 SPOUT1Q5T280 376 aaKnown RBP20.24■□□□□ 0.83
CHKB-209ENST00000481673 FBXL22Q6P050 247 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 POTEHQ6S545 545 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 PACS1Q6VY07 963 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 GIPC2Q8TF65 315 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 CCT6BQ92526 530 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 MYRFLQ96LU7 910 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 SRPK1Q96SB4 655 aaKnown RBP20.24■□□□□ 0.83
CHKB-209ENST00000481673 TBL1YQ9BQ87 522 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 VPS45Q9NRW7 570 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 NDFIP2Q9NV92 336 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 HAUS2Q9NVX0 235 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 PHTF1Q9UMS5 762 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 PLLPQ9Y342 182 aa20.24■□□□□ 0.83
CHKB-209ENST00000481673 EDF1O60869 148 aaKnown RBP20.23■□□□□ 0.83
CHKB-209ENST00000481673 LAG3P18627 525 aa20.23■□□□□ 0.83
CHKB-209ENST00000481673 ADRA1DP25100 572 aa20.23■□□□□ 0.83
CHKB-209ENST00000481673 DBN1Q16643 649 aa20.23■□□□□ 0.83
CHKB-209ENST00000481673 C5orf22Q49AR2 442 aa20.23■□□□□ 0.83
CHKB-209ENST00000481673 ARHGAP36Q6ZRI8 547 aa20.23■□□□□ 0.83
CHKB-209ENST00000481673 CMTR2Q8IYT2 770 aaKnown RBP20.23■□□□□ 0.83
CHKB-209ENST00000481673 KLF6Q99612 283 aaPredicted RBP20.23■□□□□ 0.83
CHKB-209ENST00000481673 KIFC1Q9BW19 673 aa20.23■□□□□ 0.83
CHKB-209ENST00000481673 SLC25A51Q9H1U9 297 aa20.23■□□□□ 0.83
CHKB-209ENST00000481673 KLF11O14901 512 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 SPRP35270 261 aaPredicted RBP20.22■□□□□ 0.83
CHKB-209ENST00000481673 ALDH1A3P47895 512 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 SLC11A2P49281 568 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 HARS2P49590 506 aaKnown RBP20.22■□□□□ 0.83
CHKB-209ENST00000481673 PCID2Q5JVF3 399 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 HECTD3Q5T447 861 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 MROH9Q5TGP6 573 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 MARC1Q5VT66 337 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 OTOP3Q7RTS5 596 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 TRPM8Q7Z2W7 1104 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 SLC39A11Q8N1S5 342 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 TRMT2BQ96GJ1 504 aaKnown RBP20.22■□□□□ 0.83
CHKB-209ENST00000481673 ZNF333Q96JL9 665 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 ZNF512Q96ME7 567 aaPredicted RBP20.22■□□□□ 0.83
CHKB-209ENST00000481673 RPRD1AQ96P16 312 aaPredicted RBP20.22■□□□□ 0.83
CHKB-209ENST00000481673 CLSTN3Q9BQT9 956 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 TRIM56Q9BRZ2 755 aaKnown RBP20.22■□□□□ 0.83
CHKB-209ENST00000481673 HERC2P3Q9BVR0 1158 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 NOL6Q9H6R4 1146 aaKnown RBP20.22■□□□□ 0.83
CHKB-209ENST00000481673 MANSC1Q9H8J5 431 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 PRKAG3Q9UGI9 489 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 GRID1Q9ULK0 1009 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 MAGED2Q9UNF1 606 aaPredicted RBP20.22■□□□□ 0.83
CHKB-209ENST00000481673 FNDC1Q4ZHG4 1894 aaPredicted RBP20.22■□□□□ 0.83
CHKB-209ENST00000481673 ZCWPW2A0A1B0GU75 182 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 RAMP2O60895 175 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 USP12O75317 370 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 IL1BP01584 269 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 HADHAP40939 763 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 VEPH1Q14D04 833 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 ZKSCAN8Q15776 578 aaPredicted RBP20.22■□□□□ 0.83
CHKB-209ENST00000481673 RAP1GAP2Q684P5 730 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 RNF43Q68DV7 783 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 KYAT3Q6YP21 454 aaKnown RBP20.22■□□□□ 0.83
CHKB-209ENST00000481673 RASSF3Q86WH2 238 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 RAB3IL1Q8TBN0 382 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms