RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 H3BM21 787 aa16.55■□□□□ 0.24
DDX56-210ENST00000479440 SCAMP1O15126 338 aa16.55■□□□□ 0.24
DDX56-210ENST00000479440 ATP9BO43861 1147 aa16.55■□□□□ 0.24
DDX56-210ENST00000479440 F13A1P00488 732 aa16.55■□□□□ 0.24
DDX56-210ENST00000479440 PRLRP16471 622 aa16.55■□□□□ 0.24
DDX56-210ENST00000479440 HNRNPKP61978 463 aaKnown RBP eCLIP16.55■□□□□ 0.24
DDX56-210ENST00000479440 SKOR1P84550 965 aa16.55■□□□□ 0.24
DDX56-210ENST00000479440 KIAA1614Q5VZ46 1190 aa16.55■□□□□ 0.24
DDX56-210ENST00000479440 ZCCHC8Q6NZY4 707 aaKnown RBP16.55■□□□□ 0.24
DDX56-210ENST00000479440 TMEM270Q6UE05 265 aa16.55■□□□□ 0.24
DDX56-210ENST00000479440 CCAR2Q8N163 923 aaKnown RBP16.55■□□□□ 0.24
DDX56-210ENST00000479440 UBR7Q8N806 425 aa16.55■□□□□ 0.24
DDX56-210ENST00000479440 ATP6V0D2Q8N8Y2 350 aa16.55■□□□□ 0.24
DDX56-210ENST00000479440 CCDC114Q96M63 670 aa16.55■□□□□ 0.24
DDX56-210ENST00000479440 OSBPL2Q9H1P3 480 aa16.55■□□□□ 0.24
DDX56-210ENST00000479440 SLC12A6Q9UHW9 1150 aa16.55■□□□□ 0.24
DDX56-210ENST00000479440 XPO7Q9UIA9 1087 aaKnown RBP16.55■□□□□ 0.24
DDX56-210ENST00000479440 PPM1HQ9ULR3 514 aa16.55■□□□□ 0.24
DDX56-210ENST00000479440 FARP1Q9Y4F1 1045 aaPredicted RBP16.55■□□□□ 0.24
DDX56-210ENST00000479440 ATMQ13315 3056 aa16.55■□□□□ 0.24
DDX56-210ENST00000479440 LY6G6EA0A0G2JKS1 128 aa16.54■□□□□ 0.24
DDX56-210ENST00000479440 A6NNZ2 444 aa16.54■□□□□ 0.24
DDX56-210ENST00000479440 K7ESM1 405 aa16.54■□□□□ 0.24
DDX56-210ENST00000479440 MCF2LO15068 1137 aa16.54■□□□□ 0.24
DDX56-210ENST00000479440 SLC16A3O15427 465 aaKnown RBP16.54■□□□□ 0.24
DDX56-210ENST00000479440 GABBR2O75899 941 aa16.54■□□□□ 0.24
DDX56-210ENST00000479440 PRR29P0C7W0 189 aa16.54■□□□□ 0.24
DDX56-210ENST00000479440 ZSCAN22P10073 491 aaPredicted RBP16.54■□□□□ 0.24
DDX56-210ENST00000479440 MLLT3P42568 568 aaPredicted RBP16.54■□□□□ 0.24
DDX56-210ENST00000479440 NUMBP49757 651 aa16.54■□□□□ 0.24
DDX56-210ENST00000479440 PLK1P53350 603 aa16.54■□□□□ 0.24
DDX56-210ENST00000479440 TAS2R38P59533 333 aa16.54■□□□□ 0.24
DDX56-210ENST00000479440 CNGA2Q16280 664 aa16.54■□□□□ 0.24
DDX56-210ENST00000479440 PIP5KL1Q5T9C9 394 aa16.54■□□□□ 0.24
DDX56-210ENST00000479440 Q6ZVU0 165 aa16.54■□□□□ 0.24
DDX56-210ENST00000479440 BEND5Q7L4P6 421 aa16.54■□□□□ 0.24
DDX56-210ENST00000479440 HORMAD1Q86X24 394 aa16.54■□□□□ 0.24
DDX56-210ENST00000479440 CIR1Q86X95 450 aaPredicted RBP16.54■□□□□ 0.24
DDX56-210ENST00000479440 DCP2Q8IU60 420 aaKnown RBP16.54■□□□□ 0.24
DDX56-210ENST00000479440 ARL14Q8N4G2 192 aa16.54■□□□□ 0.24
DDX56-210ENST00000479440 TFAP2BQ92481 460 aa16.54■□□□□ 0.24
DDX56-210ENST00000479440 SLC46A1Q96NT5 459 aa16.54■□□□□ 0.24
DDX56-210ENST00000479440 FZD3Q9NPG1 666 aa16.54■□□□□ 0.24
DDX56-210ENST00000479440 DYRK4Q9NR20 520 aa16.54■□□□□ 0.24
DDX56-210ENST00000479440 DNAJC28Q9NX36 388 aa16.54■□□□□ 0.24
DDX56-210ENST00000479440 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.54■□□□□ 0.24
DDX56-210ENST00000479440 NAALADL1Q9UQQ1 740 aa16.54■□□□□ 0.24
DDX56-210ENST00000479440 PCDHB4Q9Y5E5 795 aa16.54■□□□□ 0.24
DDX56-210ENST00000479440 U3KQA8 63 aa16.54■□□□□ 0.24
DDX56-210ENST00000479440 MGAQ8IWI9 3026 aa16.53■□□□□ 0.24
DDX56-210ENST00000479440 A0A1B0GVL5 298 aa16.53■□□□□ 0.24
DDX56-210ENST00000479440 TCEA3O75764 348 aa16.53■□□□□ 0.24
DDX56-210ENST00000479440 FYNP06241 537 aa16.53■□□□□ 0.24
DDX56-210ENST00000479440 ACADSBP45954 432 aa16.53■□□□□ 0.24
DDX56-210ENST00000479440 LRMPQ12912 555 aa16.53■□□□□ 0.24
DDX56-210ENST00000479440 ZNF284Q2VY69 593 aa16.53■□□□□ 0.24
DDX56-210ENST00000479440 ZSCAN23Q3MJ62 389 aa16.53■□□□□ 0.24
DDX56-210ENST00000479440 GCNT7Q6ZNI0 430 aa16.53■□□□□ 0.24
DDX56-210ENST00000479440 RBM44Q6ZP01 1051 aaKnown RBP16.53■□□□□ 0.24
DDX56-210ENST00000479440 PTAR1Q7Z6K3 402 aaPredicted RBP16.53■□□□□ 0.24
DDX56-210ENST00000479440 SLC22A18ASQ8N1D0 253 aa16.53■□□□□ 0.24
DDX56-210ENST00000479440 TPCN2Q8NHX9 752 aa16.53■□□□□ 0.24
DDX56-210ENST00000479440 KLK6Q92876 244 aa16.53■□□□□ 0.24
DDX56-210ENST00000479440 ATXN7L3BQ96GX2 97 aa16.53■□□□□ 0.24
DDX56-210ENST00000479440 ARID1BQ8NFD5 2236 aaPredicted RBP16.52■□□□□ 0.24
DDX56-210ENST00000479440 CDRT15L2A8MXV6 281 aa16.52■□□□□ 0.24
DDX56-210ENST00000479440 BNIP3LO60238 219 aa16.52■□□□□ 0.24
DDX56-210ENST00000479440 MYF5P13349 255 aa16.52■□□□□ 0.24
DDX56-210ENST00000479440 TGM2P21980 687 aa16.52■□□□□ 0.24
DDX56-210ENST00000479440 CMA1P23946 247 aa16.52■□□□□ 0.24
DDX56-210ENST00000479440 BRD2P25440 801 aaKnown RBP16.52■□□□□ 0.24
DDX56-210ENST00000479440 SYKP43405 635 aa16.52■□□□□ 0.24
DDX56-210ENST00000479440 DPYDQ12882 1025 aa16.52■□□□□ 0.24
DDX56-210ENST00000479440 NFATC3Q12968 1075 aa16.52■□□□□ 0.24
DDX56-210ENST00000479440 DLG2Q15700 870 aa16.52■□□□□ 0.24
DDX56-210ENST00000479440 ZC3H12AQ5D1E8 599 aaKnown RBP16.52■□□□□ 0.24
DDX56-210ENST00000479440 CXorf57Q6NSI4 855 aaKnown RBP16.52■□□□□ 0.24
DDX56-210ENST00000479440 KYAT3Q6YP21 454 aaKnown RBP16.52■□□□□ 0.24
DDX56-210ENST00000479440 ABI3BPQ7Z7G0 1075 aa16.52■□□□□ 0.24
DDX56-210ENST00000479440 CLEC14AQ86T13 490 aa16.52■□□□□ 0.24
DDX56-210ENST00000479440 SH2D3CQ8N5H7 860 aa16.52■□□□□ 0.24
DDX56-210ENST00000479440 ZNF548Q8NEK5 533 aaPredicted RBP16.52■□□□□ 0.24
DDX56-210ENST00000479440 POPDC2Q9HBU9 364 aa16.52■□□□□ 0.24
DDX56-210ENST00000479440 ST7Q9NRC1 585 aa16.52■□□□□ 0.24
DDX56-210ENST00000479440 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.52■□□□□ 0.24
DDX56-210ENST00000479440 VPS28Q9UK41 221 aa16.52■□□□□ 0.24
DDX56-210ENST00000479440 HPSEQ9Y251 543 aa16.52■□□□□ 0.24
DDX56-210ENST00000479440 ENTPD2Q9Y5L3 495 aa16.52■□□□□ 0.24
DDX56-210ENST00000479440 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.51■□□□□ 0.23
DDX56-210ENST00000479440 KCNU1A8MYU2 1149 aa16.51■□□□□ 0.23
DDX56-210ENST00000479440 KPNA3O00505 521 aaPredicted RBP16.51■□□□□ 0.23
DDX56-210ENST00000479440 NEBLO76041 1014 aa16.51■□□□□ 0.23
DDX56-210ENST00000479440 CLDN2P57739 230 aa16.51■□□□□ 0.23
DDX56-210ENST00000479440 CLN3Q13286 438 aa16.51■□□□□ 0.23
DDX56-210ENST00000479440 ZNF177Q13360 481 aaPredicted RBP16.51■□□□□ 0.23
DDX56-210ENST00000479440 CDKN3Q16667 212 aa16.51■□□□□ 0.23
DDX56-210ENST00000479440 C6orf132Q5T0Z8 1188 aa16.51■□□□□ 0.23
DDX56-210ENST00000479440 GUSBP11Q6P575 273 aa16.51■□□□□ 0.23
DDX56-210ENST00000479440 FOXR1Q6PIV2 292 aa16.51■□□□□ 0.23
DDX56-210ENST00000479440 Q6ZSR6 202 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms