RNA–Protein interactions for RNA: ENST00000477692.6

EXOSC1-209, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 480 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-209ENST00000477692 NPWQ8N729 165 aa13.51□□□□□ -0.25
EXOSC1-209ENST00000477692 PCDH19Q8TAB3 1148 aa13.51□□□□□ -0.25
EXOSC1-209ENST00000477692 SLC39A8Q9C0K1 460 aa13.51□□□□□ -0.25
EXOSC1-209ENST00000477692 TMEM245Q9H330 911 aa13.51□□□□□ -0.25
EXOSC1-209ENST00000477692 PRMT8Q9NR22 394 aaPredicted RBP13.51□□□□□ -0.25
EXOSC1-209ENST00000477692 POLR3BQ9NW08 1133 aaPredicted RBP13.51□□□□□ -0.25
EXOSC1-209ENST00000477692 SLC25A13Q9UJS0 675 aa13.51□□□□□ -0.25
EXOSC1-209ENST00000477692 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.51□□□□□ -0.25
EXOSC1-209ENST00000477692 MFHAS1Q9Y4C4 1052 aa13.51□□□□□ -0.25
EXOSC1-209ENST00000477692 PCDHA3Q9Y5H8 950 aa13.51□□□□□ -0.25
EXOSC1-209ENST00000477692 CXorf51AA0A1B0GTR3 108 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 A0A1W2PQF6 199 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 GALR2O43603 387 aaPredicted RBP13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 KDELR3O43731 214 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 FTCDO95954 541 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 HOXB2P14652 356 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 PRKCHP24723 683 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 STK19P49842 368 aaPredicted RBP13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 PEX5P50542 639 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 ST8SIA6P61647 398 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 ARF5P84085 180 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 CRY1Q16526 586 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 FNDC3BQ53EP0 1204 aaKnown RBP13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 ODF2Q5BJF6 829 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 RETSATQ6NUM9 610 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 MFSD7Q6UXD7 560 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 SERPINA13PQ6UXR4 307 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 TMEM92Q6UXU6 159 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 MAML2Q8IZL2 1156 aaPredicted RBP13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 PQLC3Q8N755 202 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 EXD1Q8NHP7 514 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 RNF25Q96BH1 459 aaPredicted RBP13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 HMCESQ96FZ2 354 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 CELF6Q96J87 481 aaKnown RBP13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 RPL10LQ96L21 214 aaKnown RBP13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 RNF157Q96PX1 679 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 CD248Q9HCU0 757 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 SLCO3A1Q9UIG8 710 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 SLC8A2Q9UPR5 921 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 HS3ST2Q9Y278 367 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 RAD54BQ9Y620 910 aa13.5□□□□□ -0.25
EXOSC1-209ENST00000477692 ARHGAP42A6NI28 874 aa13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 MIF4GDA9UHW6 222 aaKnown RBP13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 K7ESF4 209 aa13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 CBX4O00257 560 aa13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 LAMTOR5O43504 91 aa13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 ZRANB2O95218 330 aaKnown RBP eCLIP13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 MT-CO1P00395 513 aa13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 TDGF1P13385 188 aa13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 HLA-EP13747 358 aa13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 COL9A1P20849 921 aa13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 SERPINB6P35237 376 aa13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 CDKN2BP42772 138 aa13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 PAPOLAP51003 745 aaKnown RBP13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 DGKEP52429 567 aa13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 SERINC3Q13530 473 aa13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 PAFAH1B3Q15102 231 aaKnown RBP13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 NCBP2-AS2Q69YL0 99 aa13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 SPOCD1Q6ZMY3 1216 aa13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 RCOR2Q8IZ40 523 aa13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 SH2D3CQ8N5H7 860 aa13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 NETO2Q8NC67 525 aa13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 UBE2Q2Q8WVN8 375 aa13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 HES6Q96HZ4 224 aa13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 RBM41Q96IZ5 413 aaKnown RBP13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 PRDM16Q9HAZ2 1276 aa13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 SUN2Q9UH99 717 aa13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 FBXO4Q9UKT5 387 aa13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 PYCARDQ9ULZ3 195 aa13.49□□□□□ -0.25
EXOSC1-209ENST00000477692 CACNA1IQ9P0X4 2223 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 ZSCAN5CA6NGD5 496 aaPredicted RBP13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 TTC34A8MYJ7 566 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 DFFAO00273 331 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 DDX3YO15523 660 aaKnown RBP13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 ATP9BO43861 1147 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 CD160O95971 181 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 EPHX1P07099 455 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 SRCP12931 536 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 NNMTP40261 264 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 SERPINH1P50454 418 aaKnown RBP13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 RWDD2BP57060 319 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 SLC20A2Q08357 652 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 ANGPT1Q15389 498 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 HNRNPA1L2Q32P51 320 aaKnown RBP13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 SLC9A4Q6AI14 798 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 KIAA1211LQ6NV74 962 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 LINGO4Q6UY18 593 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 ZNF354CQ86Y25 554 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 TP53INP2Q8IXH6 220 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 CAMKK1Q8N5S9 505 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 UBL4BQ8N7F7 174 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 ZNF366Q8N895 744 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 FRS2Q8WU20 508 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 ALG3Q92685 438 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 ALS2CR12Q96Q35 445 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 HHIPQ96QV1 700 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 MAK16Q9BXY0 300 aaKnown RBP13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 PDFQ9HBH1 243 aa13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 POLMQ9NP87 494 aaPredicted RBP13.48□□□□□ -0.25
EXOSC1-209ENST00000477692 HPCAL4Q9UM19 191 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms