RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 ST8SIA6P61647 398 aa18.1■□□□□ 0.49
PTPN7-209ENST00000477554 CA9Q16790 459 aa18.1■□□□□ 0.49
PTPN7-209ENST00000477554 SCYL2Q6P3W7 929 aa18.1■□□□□ 0.49
PTPN7-209ENST00000477554 Q6ZVU0 165 aa18.1■□□□□ 0.49
PTPN7-209ENST00000477554 AADATQ8N5Z0 425 aa18.1■□□□□ 0.49
PTPN7-209ENST00000477554 ZNF557Q8N988 423 aaPredicted RBP18.1■□□□□ 0.49
PTPN7-209ENST00000477554 NETO2Q8NC67 525 aa18.1■□□□□ 0.49
PTPN7-209ENST00000477554 ZNF419Q96HQ0 510 aaPredicted RBP18.1■□□□□ 0.49
PTPN7-209ENST00000477554 ZNF830Q96NB3 372 aaPredicted RBP18.1■□□□□ 0.49
PTPN7-209ENST00000477554 KCNF1Q9H3M0 494 aa18.1■□□□□ 0.49
PTPN7-209ENST00000477554 MYO1AQ9UBC5 1043 aa18.1■□□□□ 0.49
PTPN7-209ENST00000477554 ADAMTS1Q9UHI8 967 aa18.1■□□□□ 0.49
PTPN7-209ENST00000477554 CHD5Q8TDI0 1954 aa18.1■□□□□ 0.49
PTPN7-209ENST00000477554 A0A087X0T9 212 aa18.09■□□□□ 0.49
PTPN7-209ENST00000477554 ZBTB24O43167 697 aaPredicted RBP18.09■□□□□ 0.49
PTPN7-209ENST00000477554 IPO7O95373 1038 aaKnown RBP18.09■□□□□ 0.49
PTPN7-209ENST00000477554 FAM228BP0C875 321 aa18.09■□□□□ 0.49
PTPN7-209ENST00000477554 SRCP12931 536 aa18.09■□□□□ 0.49
PTPN7-209ENST00000477554 OR1E1P30953 314 aa18.09■□□□□ 0.49
PTPN7-209ENST00000477554 PSMD8P48556 350 aa18.09■□□□□ 0.49
PTPN7-209ENST00000477554 SLC18A3Q16572 532 aa18.09■□□□□ 0.49
PTPN7-209ENST00000477554 ASTE1Q2TB18 679 aaPredicted RBP18.09■□□□□ 0.49
PTPN7-209ENST00000477554 TRIM61Q5EBN2 209 aa18.09■□□□□ 0.49
PTPN7-209ENST00000477554 PEAR1Q5VY43 1037 aaPredicted RBP18.09■□□□□ 0.49
PTPN7-209ENST00000477554 LEKR1Q6ZMV7 388 aa18.09■□□□□ 0.49
PTPN7-209ENST00000477554 CYP4V2Q6ZWL3 525 aaPredicted RBP18.09■□□□□ 0.49
PTPN7-209ENST00000477554 C11orf74Q86VG3 221 aa18.09■□□□□ 0.49
PTPN7-209ENST00000477554 GPR161Q8N6U8 529 aaKnown RBP18.09■□□□□ 0.49
PTPN7-209ENST00000477554 C12orf50Q8NA57 414 aaPredicted RBP18.09■□□□□ 0.49
PTPN7-209ENST00000477554 BTBD6Q96KE9 485 aa18.09■□□□□ 0.49
PTPN7-209ENST00000477554 CNOT8Q9UFF9 292 aaKnown RBP18.09■□□□□ 0.49
PTPN7-209ENST00000477554 SUN2Q9UH99 717 aa18.09■□□□□ 0.49
PTPN7-209ENST00000477554 DNAI1Q9UI46 699 aa18.09■□□□□ 0.49
PTPN7-209ENST00000477554 EPN1Q9Y6I3 576 aaPredicted RBP18.09■□□□□ 0.49
PTPN7-209ENST00000477554 EDDM13A0A1B0GTR0 161 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 A0A1W2PP55 124 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 CDX4O14627 284 aaPredicted RBP18.08■□□□□ 0.49
PTPN7-209ENST00000477554 BNIP3LO60238 219 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 NDUFS2O75306 463 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 ZNF821O75541 412 aaPredicted RBP18.08■□□□□ 0.49
PTPN7-209ENST00000477554 ZMPSTE24O75844 475 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 NDUFA10O95299 355 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 CD160O95971 181 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 ACADMP11310 421 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 SLC12A1Q13621 1099 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 BYSLQ13895 437 aaKnown RBP18.08■□□□□ 0.49
PTPN7-209ENST00000477554 DLG2Q15700 870 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 CST6Q15828 149 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 DCAF12L1Q5VU92 463 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 ZNF776Q68DI1 518 aaPredicted RBP18.08■□□□□ 0.49
PTPN7-209ENST00000477554 RWDD4Q6NW29 188 aaKnown RBP18.08■□□□□ 0.49
PTPN7-209ENST00000477554 PPP1R2P3Q6NXS1 205 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 DCUN1D2Q6PH85 259 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 LRRC31Q6UY01 552 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 SLC36A4Q6YBV0 504 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 CPNE8Q86YQ8 564 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 SYT12Q8IV01 421 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 SH2D3CQ8N5H7 860 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 ZNF653Q96CK0 615 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 ARHGEF26Q96DR7 871 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 CNPY3Q9BT09 278 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 EDEM2Q9BV94 578 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 ZYG11BQ9C0D3 744 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 KLC2Q9H0B6 622 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 OSBPL2Q9H1P3 480 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 PABPC3Q9H361 631 aaKnown RBP18.08■□□□□ 0.49
PTPN7-209ENST00000477554 NOL6Q9H6R4 1146 aaKnown RBP18.08■□□□□ 0.49
PTPN7-209ENST00000477554 CDV3Q9UKY7 258 aaKnown RBP18.08■□□□□ 0.49
PTPN7-209ENST00000477554 FZD10Q9ULW2 581 aa18.08■□□□□ 0.49
PTPN7-209ENST00000477554 PLXNA2O75051 1894 aa18.08■□□□□ 0.48
PTPN7-209ENST00000477554 TMEM191CA6NGB0 347 aa18.07■□□□□ 0.48
PTPN7-209ENST00000477554 EIF3CLB5ME19 914 aaKnown RBP18.07■□□□□ 0.48
PTPN7-209ENST00000477554 ATP9BO43861 1147 aa18.07■□□□□ 0.48
PTPN7-209ENST00000477554 CTSLP07711 333 aa18.07■□□□□ 0.48
PTPN7-209ENST00000477554 ARF5P84085 180 aa18.07■□□□□ 0.48
PTPN7-209ENST00000477554 SPA17Q15506 151 aa18.07■□□□□ 0.48
PTPN7-209ENST00000477554 ACCSLQ4AC99 568 aa18.07■□□□□ 0.48
PTPN7-209ENST00000477554 STPG1Q5TH74 334 aa18.07■□□□□ 0.48
PTPN7-209ENST00000477554 LAYNQ6UX15 382 aa18.07■□□□□ 0.48
PTPN7-209ENST00000477554 RAD9BQ6WBX8 426 aa18.07■□□□□ 0.48
PTPN7-209ENST00000477554 SLFN11Q7Z7L1 901 aa18.07■□□□□ 0.48
PTPN7-209ENST00000477554 KDM1BQ8NB78 822 aa18.07■□□□□ 0.48
PTPN7-209ENST00000477554 CHST14Q8NCH0 376 aa18.07■□□□□ 0.48
PTPN7-209ENST00000477554 EIF3CQ99613 913 aaKnown RBP18.07■□□□□ 0.48
PTPN7-209ENST00000477554 SPON2Q9BUD6 331 aa18.07■□□□□ 0.48
PTPN7-209ENST00000477554 ISCUQ9H1K1 167 aa18.07■□□□□ 0.48
PTPN7-209ENST00000477554 NEUROG2Q9H2A3 272 aa18.07■□□□□ 0.48
PTPN7-209ENST00000477554 TNKS2Q9H2K2 1166 aa18.07■□□□□ 0.48
PTPN7-209ENST00000477554 LUC7LQ9NQ29 371 aaKnown RBP18.07■□□□□ 0.48
PTPN7-209ENST00000477554 PPARGC1AQ9UBK2 798 aaKnown RBP18.07■□□□□ 0.48
PTPN7-209ENST00000477554 PCSK1NQ9UHG2 260 aa18.07■□□□□ 0.48
PTPN7-209ENST00000477554 PAXBP1Q9Y5B6 917 aa18.07■□□□□ 0.48
PTPN7-209ENST00000477554 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.07■□□□□ 0.48
PTPN7-209ENST00000477554 DOCK9Q9BZ29 2069 aa18.07■□□□□ 0.48
PTPN7-209ENST00000477554 SPTBN2O15020 2390 aa18.07■□□□□ 0.48
PTPN7-209ENST00000477554 MED19A0JLT2 244 aaPredicted RBP18.06■□□□□ 0.48
PTPN7-209ENST00000477554 C4orf47A7E2U8 309 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 RTN2O75298 545 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 LCA5LO95447 670 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 CFIP05156 583 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms