RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 ZBTB24O43167 697 aaPredicted RBP30.24■■■□□ 2.43
HOXB3-208ENST00000476342 SNAP91O60641 907 aa30.24■■■□□ 2.43
HOXB3-208ENST00000476342 KRT1P04264 644 aa30.24■■■□□ 2.43
HOXB3-208ENST00000476342 HLA-EP13747 358 aa30.24■■■□□ 2.43
HOXB3-208ENST00000476342 AMPD1P23109 780 aa30.24■■■□□ 2.43
HOXB3-208ENST00000476342 HOXA6P31267 233 aa30.24■■■□□ 2.43
HOXB3-208ENST00000476342 SERPINB6P35237 376 aa30.24■■■□□ 2.43
HOXB3-208ENST00000476342 ACVRL1P37023 503 aa30.24■■■□□ 2.43
HOXB3-208ENST00000476342 STK19P49842 368 aaPredicted RBP30.24■■■□□ 2.43
HOXB3-208ENST00000476342 NRLP54845 237 aa30.24■■■□□ 2.43
HOXB3-208ENST00000476342 ZNF662Q6ZS27 426 aa30.24■■■□□ 2.43
HOXB3-208ENST00000476342 VSIG1Q86XK7 387 aa30.24■■■□□ 2.43
HOXB3-208ENST00000476342 NOL6Q9H6R4 1146 aaKnown RBP30.24■■■□□ 2.43
HOXB3-208ENST00000476342 GUCA1BQ9UMX6 200 aa30.24■■■□□ 2.43
HOXB3-208ENST00000476342 NUP205Q92621 2012 aa30.24■■■□□ 2.43
HOXB3-208ENST00000476342 CXorf51AA0A1B0GTR3 108 aa30.23■■■□□ 2.43
HOXB3-208ENST00000476342 A0A1W2PQF6 199 aa30.23■■■□□ 2.43
HOXB3-208ENST00000476342 TCRBV21S2A2A0A5A6 115 aa30.23■■■□□ 2.43
HOXB3-208ENST00000476342 GRID2IPA4D2P6 1211 aa30.23■■■□□ 2.43
HOXB3-208ENST00000476342 RASA4BC9J798 803 aa30.23■■■□□ 2.43
HOXB3-208ENST00000476342 DCLK1O15075 740 aa30.23■■■□□ 2.43
HOXB3-208ENST00000476342 RASA4O43374 803 aa30.23■■■□□ 2.43
HOXB3-208ENST00000476342 IL4RP24394 825 aa30.23■■■□□ 2.43
HOXB3-208ENST00000476342 MMRN1Q13201 1228 aa30.23■■■□□ 2.43
HOXB3-208ENST00000476342 LRRC57Q8N9N7 239 aa30.23■■■□□ 2.43
HOXB3-208ENST00000476342 PRSS33Q8NF86 280 aa30.23■■■□□ 2.43
HOXB3-208ENST00000476342 RAPGEF5Q92565 580 aa30.23■■■□□ 2.43
HOXB3-208ENST00000476342 LRRC19Q9H756 370 aa30.23■■■□□ 2.43
HOXB3-208ENST00000476342 SLCO3A1Q9UIG8 710 aa30.23■■■□□ 2.43
HOXB3-208ENST00000476342 HS3ST2Q9Y278 367 aa30.23■■■□□ 2.43
HOXB3-208ENST00000476342 ZNF487B1APH4 448 aa30.22■■■□□ 2.43
HOXB3-208ENST00000476342 SP9P0CG40 484 aa30.22■■■□□ 2.43
HOXB3-208ENST00000476342 TDGF1P13385 188 aa30.22■■■□□ 2.43
HOXB3-208ENST00000476342 COL9A1P20849 921 aa30.22■■■□□ 2.43
HOXB3-208ENST00000476342 GLDCP23378 1020 aa30.22■■■□□ 2.43
HOXB3-208ENST00000476342 GEMIN4P57678 1058 aaKnown RBP30.22■■■□□ 2.43
HOXB3-208ENST00000476342 SLC20A2Q08357 652 aa30.22■■■□□ 2.43
HOXB3-208ENST00000476342 ANKRD20A8PQ5CZ79 823 aa30.22■■■□□ 2.43
HOXB3-208ENST00000476342 SH2D3CQ8N5H7 860 aa30.22■■■□□ 2.43
HOXB3-208ENST00000476342 ZNF366Q8N895 744 aa30.22■■■□□ 2.43
HOXB3-208ENST00000476342 IRF2BPLQ9H1B7 796 aa30.22■■■□□ 2.43
HOXB3-208ENST00000476342 PPP2R2CQ9Y2T4 447 aa30.22■■■□□ 2.43
HOXB3-208ENST00000476342 ARHGAP42A6NI28 874 aa30.22■■■□□ 2.43
HOXB3-208ENST00000476342 PALMO75781 387 aa30.22■■■□□ 2.43
HOXB3-208ENST00000476342 HNRNPA1L2Q32P51 320 aaKnown RBP30.22■■■□□ 2.43
HOXB3-208ENST00000476342 KIAA1211LQ6NV74 962 aa30.22■■■□□ 2.43
HOXB3-208ENST00000476342 ATP11CQ8NB49 1132 aa30.22■■■□□ 2.43
HOXB3-208ENST00000476342 FAF2Q96CS3 445 aa30.22■■■□□ 2.43
HOXB3-208ENST00000476342 HMCESQ96FZ2 354 aa30.22■■■□□ 2.43
HOXB3-208ENST00000476342 CELF6Q96J87 481 aaKnown RBP30.22■■■□□ 2.43
HOXB3-208ENST00000476342 KCNF1Q9H3M0 494 aa30.22■■■□□ 2.43
HOXB3-208ENST00000476342 ZSCAN5CA6NGD5 496 aaPredicted RBP30.21■■■□□ 2.43
HOXB3-208ENST00000476342 KDELR3O43731 214 aa30.21■■■□□ 2.43
HOXB3-208ENST00000476342 ZMPSTE24O75844 475 aa30.21■■■□□ 2.43
HOXB3-208ENST00000476342 CLCN6P51797 869 aa30.21■■■□□ 2.43
HOXB3-208ENST00000476342 PTPN5P54829 565 aa30.21■■■□□ 2.43
HOXB3-208ENST00000476342 ARF5P84085 180 aa30.21■■■□□ 2.43
HOXB3-208ENST00000476342 SERINC3Q13530 473 aa30.21■■■□□ 2.43
HOXB3-208ENST00000476342 ACCSLQ4AC99 568 aa30.21■■■□□ 2.43
HOXB3-208ENST00000476342 ANO7Q6IWH7 933 aa30.21■■■□□ 2.43
HOXB3-208ENST00000476342 KATNAL2Q8IYT4 538 aa30.21■■■□□ 2.43
HOXB3-208ENST00000476342 NPWQ8N729 165 aa30.21■■■□□ 2.43
HOXB3-208ENST00000476342 ZNF830Q96NB3 372 aaPredicted RBP30.21■■■□□ 2.43
HOXB3-208ENST00000476342 KLC2Q9H0B6 622 aa30.21■■■□□ 2.43
HOXB3-208ENST00000476342 FBRSQ9HAH7 460 aa30.21■■■□□ 2.43
HOXB3-208ENST00000476342 CD248Q9HCU0 757 aa30.21■■■□□ 2.43
HOXB3-208ENST00000476342 LZTFL1Q9NQ48 299 aa30.21■■■□□ 2.43
HOXB3-208ENST00000476342 ETNK2Q9NVF9 386 aa30.21■■■□□ 2.43
HOXB3-208ENST00000476342 BCCIPQ9P287 314 aaKnown RBP eCLIP30.21■■■□□ 2.43
HOXB3-208ENST00000476342 EBF1Q9UH73 591 aa30.21■■■□□ 2.43
HOXB3-208ENST00000476342 AMFRQ9UKV5 643 aa30.21■■■□□ 2.43
HOXB3-208ENST00000476342 CCDC163A0A0D9SF12 145 aa30.2■■■□□ 2.42
HOXB3-208ENST00000476342 EDDM13A0A1B0GTR0 161 aa30.2■■■□□ 2.42
HOXB3-208ENST00000476342 CCDC66A2RUB6 948 aa30.2■■■□□ 2.42
HOXB3-208ENST00000476342 TTC34A8MYJ7 566 aa30.2■■■□□ 2.42
HOXB3-208ENST00000476342 H0Y858 1186 aa30.2■■■□□ 2.42
HOXB3-208ENST00000476342 ATP9BO43861 1147 aa30.2■■■□□ 2.42
HOXB3-208ENST00000476342 SRCP12931 536 aa30.2■■■□□ 2.42
HOXB3-208ENST00000476342 CTNNA1P35221 906 aaKnown RBP30.2■■■□□ 2.42
HOXB3-208ENST00000476342 TCF15Q12870 199 aa30.2■■■□□ 2.42
HOXB3-208ENST00000476342 CAMK2GQ13555 558 aaPredicted RBP30.2■■■□□ 2.42
HOXB3-208ENST00000476342 AFMIDQ63HM1 303 aa30.2■■■□□ 2.42
HOXB3-208ENST00000476342 LINGO4Q6UY18 593 aa30.2■■■□□ 2.42
HOXB3-208ENST00000476342 PEX26Q7Z412 305 aa30.2■■■□□ 2.42
HOXB3-208ENST00000476342 PCDH19Q8TAB3 1148 aa30.2■■■□□ 2.42
HOXB3-208ENST00000476342 SLC39A8Q9C0K1 460 aa30.2■■■□□ 2.42
HOXB3-208ENST00000476342 CAPN6Q9Y6Q1 641 aa30.2■■■□□ 2.42
HOXB3-208ENST00000476342 TARSL2A2RTX5 802 aaKnown RBP30.19■■■□□ 2.42
HOXB3-208ENST00000476342 SERPINH1P50454 418 aaKnown RBP30.19■■■□□ 2.42
HOXB3-208ENST00000476342 DLG2Q15700 870 aa30.19■■■□□ 2.42
HOXB3-208ENST00000476342 RASSF3Q86WH2 238 aa30.19■■■□□ 2.42
HOXB3-208ENST00000476342 ARHGAP12Q8IWW6 846 aa30.19■■■□□ 2.42
HOXB3-208ENST00000476342 HMGB4Q8WW32 186 aa30.19■■■□□ 2.42
HOXB3-208ENST00000476342 RNF25Q96BH1 459 aaPredicted RBP30.19■■■□□ 2.42
HOXB3-208ENST00000476342 ERLEC1Q96DZ1 483 aa30.19■■■□□ 2.42
HOXB3-208ENST00000476342 MAK16Q9BXY0 300 aaKnown RBP30.19■■■□□ 2.42
HOXB3-208ENST00000476342 C3orf70A6NLC5 250 aaPredicted RBP30.18■■■□□ 2.42
HOXB3-208ENST00000476342 DFFAO00273 331 aa30.18■■■□□ 2.42
HOXB3-208ENST00000476342 MT-CO1P00395 513 aa30.18■■■□□ 2.42
HOXB3-208ENST00000476342 HEATR6Q6AI08 1181 aaKnown RBP30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms