RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 CD160O95971 181 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 ADH1BP00325 375 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 TBC1D3HP0C7X1 549 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 SRCP12931 536 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 UCHL3P15374 230 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 GLDCP23378 1020 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 CD38P28907 300 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 MAT2AP31153 395 aaKnown RBP7.21□□□□□ -1.26
HDAC3-207ENST00000475549 FLT3P36888 993 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 MTIF2P46199 727 aaKnown RBP7.21□□□□□ -1.26
HDAC3-207ENST00000475549 KLK7P49862 253 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 CCT8P50990 548 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 CDH4P55283 916 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 C21orf59P57076 290 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 NXPH1P58417 271 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 SULT2A1Q06520 285 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 BNIP3Q12983 259 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 DNAJC3Q13217 504 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 SMAD1Q15797 465 aaKnown RBP7.21□□□□□ -1.26
HDAC3-207ENST00000475549 ACCSLQ4AC99 568 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 RABGAP1LQ5R372 815 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 PIP5KL1Q5T9C9 394 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 TTC39BQ5VTQ0 682 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-207ENST00000475549 RNF219Q5W0B1 726 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-207ENST00000475549 TBC1D3GQ6DHY5 549 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 SMYD5Q6GMV2 418 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 TBC1D3CQ6IPX1 549 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 LRSAM1Q6UWE0 723 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 LINGO4Q6UY18 593 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 Q6ZVU0 165 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 SND1Q7KZF4 910 aaKnown RBP eCLIP7.21□□□□□ -1.26
HDAC3-207ENST00000475549 KANSL1Q7Z3B3 1105 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 NOP9Q86U38 636 aaKnown RBP7.21□□□□□ -1.26
HDAC3-207ENST00000475549 CCDC117Q8IWD4 279 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-207ENST00000475549 TBC1D3Q8IZP1 549 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-207ENST00000475549 SH2D3CQ8N5H7 860 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 OR2A12Q8NGT7 310 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 CPA5Q8WXQ8 436 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 C18orf8Q96DM3 657 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 PGAP3Q96FM1 320 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-207ENST00000475549 SERAC1Q96JX3 654 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 C1orf74Q96LT6 269 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 SPAG5Q96R06 1193 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 TBCBQ99426 244 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 ELF4Q99607 663 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-207ENST00000475549 CDC6Q99741 560 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 ACE2Q9BYF1 805 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-207ENST00000475549 WDCPQ9H6R7 721 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.21□□□□□ -1.26
HDAC3-207ENST00000475549 NOCTQ9UK39 431 aaKnown RBP7.21□□□□□ -1.26
HDAC3-207ENST00000475549 VPS28Q9UK41 221 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 HS3ST2Q9Y278 367 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 GPSM3Q9Y4H4 160 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 ACTL7AQ9Y615 435 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 CKAP5Q14008 2032 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 PI4KAP42356 2102 aa7.21□□□□□ -1.26
HDAC3-207ENST00000475549 MYH10P35580 1976 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 F8VZ95 297 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 EPHB6O15197 1021 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 DFNA5O60443 496 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 ZMPSTE24O75844 475 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 ENDOD1O94919 500 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 MMEP08473 750 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 PRKCSHP14314 528 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-207ENST00000475549 CHRNB2P17787 502 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 RRM1P23921 792 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 NNMTP40261 264 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 GRK6P43250 576 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 RXRGP48443 463 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 SULT1E1P49888 294 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 OXCT1P55809 520 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 SFSWAPQ12872 951 aaKnown RBP7.2□□□□□ -1.26
HDAC3-207ENST00000475549 RAPGEF1Q13905 1077 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 SLC25A52Q3SY17 297 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 TCP11X2Q5H9J9 407 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 TAF3Q5VWG9 929 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 C19orf48Q6RUI8 117 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 DHRS13Q6UX07 377 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 TFAP2DQ7Z6R9 452 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 ADAT2Q7Z6V5 191 aaKnown RBP7.2□□□□□ -1.26
HDAC3-207ENST00000475549 SETD3Q86TU7 594 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-207ENST00000475549 ZDHHC17Q8IUH5 632 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 SLC25A45Q8N413 288 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 EID2Q8N6I1 236 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 TMEM145Q8NBT3 493 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 CHST14Q8NCH0 376 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 TMEM35BQ8NCS4 154 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 PIP4K2CQ8TBX8 421 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 SLC20A1Q8WUM9 679 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 TSC1Q92574 1164 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 ARRDC3Q96B67 414 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 CFAP57Q96MR6 1250 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 NOX5Q96PH1 765 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 STK33Q9BYT3 514 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 SYNCQ9H7C4 482 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 ERVMER34-1Q9H9K5 563 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 AASDHPPTQ9NRN7 309 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 CHMP5Q9NZZ3 219 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 VPS51Q9UID3 782 aa7.2□□□□□ -1.26
HDAC3-207ENST00000475549 RAXQ9Y2V3 346 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms