RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 RASA4O43374 803 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 KRT86O43790 486 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 CCDC175P0C221 793 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 TDGF1P13385 188 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 AMPD1P23109 780 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 GLDCP23378 1020 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 NDST2P52849 883 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 CCZ1BP86790 482 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 CCZ1P86791 482 aaPredicted RBP12.7□□□□□ -0.38
DDX56-209ENST00000473924 DMWDQ09019 674 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 MMRN1Q13201 1228 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 DPYSL3Q14195 570 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 PARP15Q460N3 678 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 LRRC38Q5VT99 294 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 TMCO3Q6UWJ1 677 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 LINGO4Q6UY18 593 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 UMODL1-AS1Q8N2C9 162 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 MDGA1Q8NFP4 955 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 KIAA1524Q8TCG1 905 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 MYO19Q96H55 970 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 CELF6Q96J87 481 aaKnown RBP12.7□□□□□ -0.38
DDX56-209ENST00000473924 TPSD1Q9BZJ3 242 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 ZSCAN32Q9NX65 697 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 DDX56Q9NY93 547 aaKnown RBP12.7□□□□□ -0.38
DDX56-209ENST00000473924 TRIM10Q9UDY6 481 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 RAPGEFL1Q9UHV5 662 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.7□□□□□ -0.38
DDX56-209ENST00000473924 MUC22E2RYF6 1773 aaPredicted RBP12.69□□□□□ -0.38
DDX56-209ENST00000473924 CCDC163A0A0D9SF12 145 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 A0A0U1RQJ8 604 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 EDDM13A0A1B0GTR0 161 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 ARHGAP42A6NI28 874 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 DFFAO00273 331 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 PSTPIP1O43586 416 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 KRT1P04264 644 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 CD48P09326 243 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 SRCP12931 536 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 GABRG2P18507 467 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 KDELR1P24390 212 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 SERPINB6P35237 376 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 GEMIN4P57678 1058 aaKnown RBP12.69□□□□□ -0.38
DDX56-209ENST00000473924 SLC20A2Q08357 652 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 DPYSQ14117 519 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 DLG2Q15700 870 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 HNRNPA1L2Q32P51 320 aaKnown RBP12.69□□□□□ -0.38
DDX56-209ENST00000473924 KIAA1324Q6UXG2 1013 aaKnown RBP12.69□□□□□ -0.38
DDX56-209ENST00000473924 WDR5BQ86VZ2 330 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 RASSF3Q86WH2 238 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 SYCE1Q8N0S2 351 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 SH2D3CQ8N5H7 860 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 LZTR1Q8N653 840 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 FAM71BQ8TC56 605 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 HMCESQ96FZ2 354 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 ZNF670Q9BS34 389 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 ACE2Q9BYF1 805 aaPredicted RBP12.69□□□□□ -0.38
DDX56-209ENST00000473924 MTG2Q9H4K7 406 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 NOL6Q9H6R4 1146 aaKnown RBP12.69□□□□□ -0.38
DDX56-209ENST00000473924 EBF1Q9UH73 591 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 GUCA1BQ9UMX6 200 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 HS3ST2Q9Y278 367 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 PCDHGA2Q9Y5H1 932 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 R4GN57 208 aa12.69□□□□□ -0.38
DDX56-209ENST00000473924 TARSL2A2RTX5 802 aaKnown RBP12.68□□□□□ -0.38
DDX56-209ENST00000473924 ZSCAN5CA6NGD5 496 aaPredicted RBP12.68□□□□□ -0.38
DDX56-209ENST00000473924 DCLK1O15075 740 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 KDELR3O43731 214 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 ATP9BO43861 1147 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 BNIP3LO60238 219 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 RNASEH1O60930 286 aaKnown RBP12.68□□□□□ -0.38
DDX56-209ENST00000473924 SIN3BO75182 1162 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 MT-CO1P00395 513 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 ACADMP11310 421 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 NDUFV2P19404 249 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 IL4RP24394 825 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 VASPP50552 380 aaPredicted RBP12.68□□□□□ -0.38
DDX56-209ENST00000473924 PAPOLAP51003 745 aaKnown RBP12.68□□□□□ -0.38
DDX56-209ENST00000473924 ARSEP51690 589 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 CLCN6P51797 869 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 ARF5P84085 180 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 SERINC3Q13530 473 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 CAMK2GQ13555 558 aaPredicted RBP12.68□□□□□ -0.38
DDX56-209ENST00000473924 USP39Q53GS9 565 aaKnown RBP12.68□□□□□ -0.38
DDX56-209ENST00000473924 ANKRD20A8PQ5CZ79 823 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 LEKR1Q6ZMV7 388 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 CACUL1Q86Y37 369 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 TMPRSS6Q8IU80 811 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 NPWQ8N729 165 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 ZBTB44Q8NCP5 570 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 OR2T3Q8NH03 318 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.68□□□□□ -0.38
DDX56-209ENST00000473924 RAPGEF5Q92565 580 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 TSC1Q92574 1164 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 PRCCQ92733 491 aaPredicted RBP12.68□□□□□ -0.38
DDX56-209ENST00000473924 NELL1Q92832 810 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 RNF25Q96BH1 459 aaPredicted RBP12.68□□□□□ -0.38
DDX56-209ENST00000473924 MRGPRX1Q96LB2 322 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 CCDC114Q96M63 670 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 MAK16Q9BXY0 300 aaKnown RBP12.68□□□□□ -0.38
DDX56-209ENST00000473924 SLC39A8Q9C0K1 460 aa12.68□□□□□ -0.38
DDX56-209ENST00000473924 LRRC19Q9H756 370 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms