RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 MTHFD1LQ6UB35 978 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 PTF1AQ7RTS3 328 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 DSG4Q86SJ6 1040 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 MICU3Q86XE3 530 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 RFX6Q8HWS3 928 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 RHOT2Q8IXI1 618 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 LZTR1Q8N653 840 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 TOP6BLQ8N6T0 577 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 NIPA2Q8N8Q9 360 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 PSMA8Q8TAA3 256 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 PPP1R13LQ8WUF5 828 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 METTL21AQ8WXB1 218 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 ASB11Q8WXH4 323 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 CFHR4Q92496 578 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 SGCDQ92629 289 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 THRSPQ92748 146 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 ISL2Q96A47 359 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 VWCEQ96DN2 955 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 SGF29Q96ES7 293 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 PERPQ96FX8 193 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 ATP6V1G3Q96LB4 118 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 CMTM3Q96MX0 182 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 GAL3ST1Q99999 423 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 DDX50Q9BQ39 737 aaKnown RBP6.19□□□□□ -1.42
RTF1-203ENST00000473214 BCL7BQ9BQE9 202 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 FDXACB1Q9BRP7 624 aaPredicted RBP6.19□□□□□ -1.42
RTF1-203ENST00000473214 MYL10Q9BUA6 226 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 TUBB6Q9BUF5 446 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 TUBB2BQ9BVA1 445 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 NFKBIZQ9BYH8 718 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.19□□□□□ -1.42
RTF1-203ENST00000473214 CARD9Q9H257 536 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 CHST8Q9H2A9 424 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 MAGEE1Q9HCI5 957 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 PRDM7Q9NQW5 492 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 KCNH7Q9NS40 1196 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 TDP1Q9NUW8 608 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 PPP1R14DQ9NXH3 145 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 PRR13Q9NZ81 148 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 TMPRSS11EQ9UL52 423 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 ZMYND8Q9ULU4 1186 aaPredicted RBP6.19□□□□□ -1.42
RTF1-203ENST00000473214 PPIEQ9UNP9 301 aaKnown RBP6.19□□□□□ -1.42
RTF1-203ENST00000473214 NAALAD2Q9Y3Q0 740 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 NUMBLQ9Y6R0 609 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 SPATA31A5Q5VU36 1347 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 SPATA31A7Q8IWB4 1347 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 KDM3AQ9Y4C1 1321 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 CRYBG1Q9Y4K1 1723 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 COL15A1P39059 1388 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 TCRBV5S4A2TA0A5A2 114 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 DENND3A2RUS2 1198 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 NCF1BA6NI72 391 aaPredicted RBP6.18□□□□□ -1.42
RTF1-203ENST00000473214 NCF1CA8MVU1 366 aaPredicted RBP6.18□□□□□ -1.42
RTF1-203ENST00000473214 B8ZZF3 427 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 PYCARD-AS1I3L0S3 204 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 PEX12O00623 359 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 CTDSP2O14595 271 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 PCDH17O14917 1159 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 TGFB1I1O43294 461 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 BUB1O43683 1085 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 ZC3H11AO75152 810 aaKnown RBP eCLIP6.18□□□□□ -1.42
RTF1-203ENST00000473214 PPP6R2O75170 966 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 PRAMEF12O95522 483 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 DIRAS3O95661 229 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 GLP2RO95838 553 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 HMGCRP04035 888 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 ITGB1P05556 798 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 RB1P06400 928 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 S100A6P06703 90 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 ANXA6P08133 673 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 ABCB1P08183 1280 aaPredicted RBP6.18□□□□□ -1.42
RTF1-203ENST00000473214 LTA4HP09960 611 aaKnown RBP6.18□□□□□ -1.42
RTF1-203ENST00000473214 SELLP14151 372 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 IFNGR1P15260 489 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 PECAM1P16284 738 aaPredicted RBP6.18□□□□□ -1.42
RTF1-203ENST00000473214 SYN1P17600 705 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 KLRK1P26718 216 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 RPA1P27694 616 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 TNFRSF8P28908 595 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 GCLCP48506 637 aaPredicted RBP6.18□□□□□ -1.42
RTF1-203ENST00000473214 BMXP51813 675 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 CTAG1AP78358 180 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 PPARAQ07869 468 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 LSAMPQ13449 338 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 DOC2AQ14183 400 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 GALNT3Q14435 633 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 KCNMB1Q16558 191 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 MLANAQ16655 118 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 DGKDQ16760 1214 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 AAK1Q2M2I8 961 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 TWISTNBQ3B726 338 aaPredicted RBP6.18□□□□□ -1.42
RTF1-203ENST00000473214 ANKRD20A4Q4UJ75 823 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 ANKRD20A8PQ5CZ79 823 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 FBXO48Q5FWF7 155 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 TCTE1Q5JU00 501 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 ANKRD20A2Q5SQ80 823 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 ANKRD20A1Q5TYW2 823 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 ANKRD20A3Q5VUR7 823 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 RAP1GAP2Q684P5 730 aa6.18□□□□□ -1.42
RTF1-203ENST00000473214 CLEC2AQ6UVW9 174 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms