RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 A0A1W2PP55 124 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 K7ERQ8 282 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 CBX4O00257 560 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 MID1O15344 667 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 CREB3O43889 395 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 ZMPSTE24O75844 475 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 IL1BP01584 269 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 TPM1P09493 284 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 SDHBP21912 280 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 MAOBP27338 520 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 EPHB2P29323 1055 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 ACVRL1P37023 503 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 EIF4A3P38919 411 aaKnown RBP9.37□□□□□ -0.91
SYN3-211ENST00000472027 DPP6P42658 865 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 MAPKAPK2P49137 400 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 IRX4P78413 519 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 ARF5P84085 180 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 GFPT1Q06210 699 aaPredicted RBP9.37□□□□□ -0.91
SYN3-211ENST00000472027 SLC20A2Q08357 652 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 TSR1Q2NL82 804 aaKnown RBP9.37□□□□□ -0.91
SYN3-211ENST00000472027 TTC31Q49AM3 519 aaPredicted RBP9.37□□□□□ -0.91
SYN3-211ENST00000472027 SYCP2LQ5T4T6 812 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 ERMARDQ5T6L9 678 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 DCAF12L1Q5VU92 463 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 IL31Q6EBC2 164 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 LINGO4Q6UY18 593 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 USP30Q70CQ3 517 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 HDDC3Q8N4P3 179 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 NETO1Q8TDF5 533 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 GANCQ8TET4 914 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 ARHGEF2Q92974 986 aaKnown RBP9.37□□□□□ -0.91
SYN3-211ENST00000472027 DNAJC7Q99615 494 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 OMDQ99983 421 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 ACE2Q9BYF1 805 aaPredicted RBP9.37□□□□□ -0.91
SYN3-211ENST00000472027 BTBD1Q9H0C5 482 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 RBSNQ9H1K0 784 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 NEUROG2Q9H2A3 272 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 SGK2Q9HBY8 427 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 ATP13A1Q9HD20 1204 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 ZNHIT6Q9NWK9 470 aaKnown RBP9.37□□□□□ -0.91
SYN3-211ENST00000472027 GPATCH2LQ9NWQ4 482 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 FBXL12Q9NXK8 326 aa9.37□□□□□ -0.91
SYN3-211ENST00000472027 CDV3Q9UKY7 258 aaKnown RBP9.37□□□□□ -0.91
SYN3-211ENST00000472027 MEI4A8MW99 385 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 WASH4PA8MWX3 477 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 MCF2LO15068 1137 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 SMAD6O43541 496 aaKnown RBP9.36□□□□□ -0.91
SYN3-211ENST00000472027 BNIP3LO60238 219 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 PRPSAP2O60256 369 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 RAMP2O60895 175 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 LRCH4O75427 683 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 RNASEH2AO75792 299 aaKnown RBP9.36□□□□□ -0.91
SYN3-211ENST00000472027 SEMA4FO95754 770 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 CD160O95971 181 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 ADH1BP00325 375 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 CYP1A2P05177 515 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 C5AR1P21730 350 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 MIPP30301 263 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 HOXD12P35452 270 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 ETFBP38117 255 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 PSMD8P48556 350 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 CLCN6P51797 869 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 GALCP54803 685 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 ADKP55263 362 aaKnown RBP9.36□□□□□ -0.91
SYN3-211ENST00000472027 SFSWAPQ12872 951 aaKnown RBP9.36□□□□□ -0.91
SYN3-211ENST00000472027 SEMA3BQ13214 749 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 ELAVL3Q14576 367 aaKnown RBP9.36□□□□□ -0.91
SYN3-211ENST00000472027 PUM1Q14671 1186 aaKnown RBP eCLIP9.36□□□□□ -0.91
SYN3-211ENST00000472027 ACAP1Q15027 740 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 POLD3Q15054 466 aaPredicted RBP9.36□□□□□ -0.91
SYN3-211ENST00000472027 CA9Q16790 459 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 DUOXA1Q1HG43 343 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 ASTE1Q2TB18 679 aaPredicted RBP9.36□□□□□ -0.91
SYN3-211ENST00000472027 TRIM61Q5EBN2 209 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 WDR45BQ5MNZ6 344 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 RETSATQ6NUM9 610 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 SLC23A3Q6PIS1 610 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 SARM1Q6SZW1 724 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 Q6ZVU0 165 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 RTL3Q8N8U3 475 aaKnown RBP9.36□□□□□ -0.91
SYN3-211ENST00000472027 CEP76Q8TAP6 659 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 DNASE2BQ8WZ79 361 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 OR8D1Q8WZ84 308 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 ARHGEF26Q96DR7 871 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 BTBD6Q96KE9 485 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 PEBP4Q96S96 227 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 CHP1Q99653 195 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 EPAS1Q99814 870 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 NCAPGQ9BPX3 1015 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 SNRNP25Q9BV90 132 aaKnown RBP9.36□□□□□ -0.91
SYN3-211ENST00000472027 NUSAP1Q9BXS6 441 aaKnown RBP9.36□□□□□ -0.91
SYN3-211ENST00000472027 TRIM5Q9C035 493 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 MAGEH1Q9H213 219 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 DHX35Q9H5Z1 703 aaKnown RBP9.36□□□□□ -0.91
SYN3-211ENST00000472027 C6orf106Q9H6K1 298 aaPredicted RBP9.36□□□□□ -0.91
SYN3-211ENST00000472027 CATSPERBQ9H7T0 1116 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 ABHD10Q9NUJ1 306 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 SERGEFQ9UGK8 458 aa9.36□□□□□ -0.91
SYN3-211ENST00000472027 EVLQ9UI08 416 aaPredicted RBP9.36□□□□□ -0.91
SYN3-211ENST00000472027 SARDHQ9UL12 918 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms